BAC Information

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BAC

Clone NameB6Ng01-267A11
Chromosome4 (Build37)
Map Location 5,764,020 - 5,764,906
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039338, 1700012H17Rik
Downstream geneLOC669309, 3110003A22Rik, Cyp7a1, Sdcbp, Nsmaf, LOC100039397, LOC100039414, Tox
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267A11.bB6Ng01-267A11.g
ACCGA070268GA070269
length243878
definitionB6Ng01-267A11.b B6Ng01-267A11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttaccactggaagtagggtctgtctctgactctcttgcctacttgtggga
cctgttcttcttactgggttgtctcatccagacttgacaaaatagtaagt
gactggtctttgtttagcttgttatccagtgtctggttgatatccctggg
aggtctgctctaatctgagaggagctggagctgggagttgatcttgaggt
gaatctgggagagaggagaaatgtgggggagagactggggaaa

gaattctttgcatgtttccaaaaattccctatgataattttgattaaaat
tccattatactcagaagttaggatgagatttaacaagggatgtgaaagaa
aggtgtgcacttagacattcaaagcagtgaagataatcttcaagcatttt
tacattgacatcttcagtgcccagcaactaattgttgatgttgccacaca
acagcatctctcaggagcattcaaaaattgataacttttagatatgtcat
ggatgaaaatttgttttccttaatggattatggcacagagtaactgaaac
aattccaagaacaacacatagcagtagttcacgaacacataaaatgttag
cagtacatcttatcattggtatatccatgtctaggaaatagaatcaaatc
tacaaaagtttttttagagggattccatttaaaaatcattcctttagaat
gtgccatagaattttataggcttgcttttctgatatgtcatcagtatttc
cattggcaagagcaaacttttttgtttaataagaaaaatgaggtagaata
aaagattatcacagtttattttgcaggatggatggaagctatatatgtag
tagataagaattattttttgagtcgggcatggtggtgcacgcctttaatc
ctagcactcgggaggcagaggcaggcagatttctgagtttgaggccagcc
tggtctacagagtgagttccaggacagccagggctatacagagaaaccct
gtctcgaaaaacaaaaaaacaaacacacacacagagagagagagagagag
agagagagagagagagagagagagagagagagagagagagagagagataa
acgagagtacacactgagagggagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_5764020_5764906
seq2: B6Ng01-267A11.g_67_944

seq1  GAATTCTTTGCATGTTTCCAAAAATTCCCTATGATAATTTTGATTAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCATGTTTCCAAAAATTCCCTATGATAATTTTGATTAAAAT  50

seq1  TCCATTATACTCAGAAGTTAGGATGAGATTTAACAAGGGATGTGAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATACTCAGAAGTTAGGATGAGATTTAACAAGGGATGTGAAAGAA  100

seq1  AGGTGTGCACTTAGACATTCAAAGCAGTGAAGATAATCTTCAAGCATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGCACTTAGACATTCAAAGCAGTGAAGATAATCTTCAAGCATTTT  150

seq1  TACATTGACATCTTCAGTGCCCAGCAACTAATTGTTGATGTTGCCACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGACATCTTCAGTGCCCAGCAACTAATTGTTGATGTTGCCACACA  200

seq1  ACAGCATCTCTCAGGAGCATTCAAAAATTGATAACTTTTAGATATGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATCTCTCAGGAGCATTCAAAAATTGATAACTTTTAGATATGTCAT  250

seq1  GGATGAAAATTTGTTTTCCTTAATGGATTATGGCACAGAGTAACTGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAAAATTTGTTTTCCTTAATGGATTATGGCACAGAGTAACTGAAAC  300

seq1  AATTCCAAGAACAACACATAGCAGTAGTTCACGAACACATAAAATGTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAAGAACAACACATAGCAGTAGTTCACGAACACATAAAATGTTAG  350

seq1  CAGTACATCTTATCATTGGTATATCCATGTCTAGGAAATAGAATCAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACATCTTATCATTGGTATATCCATGTCTAGGAAATAGAATCAAATC  400

seq1  TACAAAAGTTTTTTTAGAGGGATTCCATTTAAAAATCATTCCTTTAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAGTTTTTTTAGAGGGATTCCATTTAAAAATCATTCCTTTAGAAT  450

seq1  GTGCCATAGAATTTTATAGGCTTGCTTTTCTGATATGTCATCAGTATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCATAGAATTTTATAGGCTTGCTTTTCTGATATGTCATCAGTATTTC  500

seq1  CATTGGCAAGAGCAAACTTTTTTGTTTAATAAGAAAAATGAGGTAGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCAAGAGCAAACTTTTTTGTTTAATAAGAAAAATGAGGTAGAATA  550

seq1  AAAGATTATCACAGTTTATTTTGCAGGATGGATGGAAGCTATATATGTAG  600
      |||                 ||||||||||||||||||||||||||||||
seq2  AAANNNNNNNNNNNNNNNNNTTGCAGGATGGATGGAAGCTATATATGTAG  600

seq1  TAGATAAGAATTATTTTTTGAGTCGGGCATGGTGGTGCACGCCTTTAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAGAATTATTTTTTGAGTCGGGCATGGTGGTGCACGCCTTTAATC  650

seq1  CTAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGGCCAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGGCCAGCC  700

seq1  TGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCT  750

seq1  GTCTCGAAAAACAAAAAAACAAACACACACACAGAGAGAGAGAGAGAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCGAAAAACAAAAAAACAAACACACACACAGAGAGAGAGAGAGAGAG  800

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAA  850

seq1  AAGAGAGAAAGAGACAGAGAGAGAGAGAGGGAGAGAG  887
      | |||||  | | || ||||| |||||||        
seq2  ACGAGAG-TACACACTGAGAGGGAGAGAG--------  878


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