BAC Information

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BAC

Clone NameB6Ng01-267E09
Chromosome4 (Build37)
Map Location 131,674,869 - 131,831,374
singlet/doubletdoublet
Overlap geneOprd1, LOC664894, Ythdf2, LOC664903, Gmeb1, Rnu11, Taf12
Upstream geneGm831, EG664832, LOC100039799, Ptpru, Mecr, Sfrs4, EG664865, EG623230, Epb4.1, LOC666480, LOC100039835
Downstream gene9530096D07Rik, LOC100039864, Trspap1, Rcc1, Snhg3, Phactr4, Med18, Sesn2, Atpif1, Dnajc8, Ptafr, Eya3, Xkr8, Smpdl3b, Rpa2, BC013712, LOC100039917, Ppp1r8, Stx12, OTTMUSG00000010099, BC008163, Fgr, Ahdc1, LOC100041932, Wasf2, Gpr3, Cd164l2, Fcnc-ps, Map3k6, Sytl1, D4Ertd196e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267E09.bB6Ng01-267E09.g
ACCGA070448GA070449
length1,106527
definitionB6Ng01-267E09.b B6Ng01-267E09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,830,262 - 131,831,374)(131,674,869 - 131,675,401)
sequence
gaattcaaagtgttcttttgctgcccttccatctatgacagtttgctagt
gatatagagatctgtgctcaacgggggctgaatggaacagggcttaaggt
acttatcaagtatataactgagttcaaactgctttcagcttcacatctga
ttcacaataatgaagaaaaacgaagacgtttcatgtggcttttctaggtt
aagtaacggacacaagaaaaagcctaaatgccaaaagccaaataggcagc
gccaagaagtcttcccccgaatatatatatcctaatcctccgggtacaga
gaacagatcgctaaaccttttcaacttttctcccttgaaggctgatctcc
cagccgttaaggaccccctagttccttcacttttaggagctcgggtcctt
acatctctgtccctccagaaactcttgagtctgaaagcccggatcttgtc
cccaaagaagacccagtcctcactgcccgcttcgattccctttcaaattc
aagtcttctctgcctccttctctagctccagtcctcaagtctttgctgcc
cggtttctgaatccttaggagctgggactttactgtcccgcttctgtctc
ttaggagcccgagtcctctcgggctccacttttacctctctggagcctgt
gtcttcacgccccgtttcgttcctaccctcgcctcctataaagtgcggga
tcctcaccatcctgtccctctcagaaggctttccctcagatgctgcagaa
tccacatccgtccccgtttcctaagtctctcattcagagctcgagtcccc
aacagccgctgcttctgcgagcccgaacccctcaagtcccgtcccaagag
cctgggctcctcagccccgtctcttccacagcctagttcttccagcactg
acccgctgtgggtctgggtcctgacaccctcctcccgctcttcgtcctca
actgccagggcccaagactcacaggcagcagcgtctatctccccatgata
tgcgagactgccccagtgaagctttcgtctcagcagcagtcgactgcgcg
tcctccccaggcacttcagcaccgcttccccgccttcaccggaaacgcgc
gctctt
ctggtgtatcaggttatagctggagagctctaagagtggagaaagtgact
ttctgaaagcagagaccaactgtagggtgtggaagggaaagtgtgcaccc
attatcattaacctagcactcaggaagctgaaacaggagcattacaaatt
tgagtctagcctcagcttcatcttgagaccctgtcttggaaagacaaaaa
aataaatccttgggtatgttggtacacacctgtaattccagctcatcata
cttccaaaggtaacggggaactctttgtttttgaaaaagaatccttctac
atagccctggctgtcctagaactctttatgtagaccagactaatctctaa
cagaaacctgcctatctttgcctcctaggtgctgggattaaaggcatgca
tgctcccacaaagcccagctggccaaactatctgttaacgtttttttcct
ccaggatggatcagaggtttgggttttttgtggttggttttgtttgttag
aaaagaggagaaggaggaggaagagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_131830262_131831374
seq2: B6Ng01-267E09.b_47_1152 (reverse)

seq1  AAGAGCCGCGCGTTTCCGGGTTGGAGGCGGGG-AGCGGTGCCGGAAGTGC  49
      ||||| |||||||||||||  || |||||||| ||||||| | |||||||
seq2  AAGAG-CGCGCGTTTCCGG--TGAAGGCGGGGAAGCGGTG-CTGAAGTGC  46

seq1  TTGGGGAGGGCCGCGCAGTCGGACCGGCTGCTGAGACGAAAGCTTCACTG  99
       |||||| || ||||||||||   | ||||||||||||||||||||||||
seq2  CTGGGGA-GGACGCGCAGTCG--ACTGCTGCTGAGACGAAAGCTTCACTG  93

seq1  GGGCAGTCTCCGCATATCATGGGGAGATAGACGCTGCTGCCTGTGAGTCT  149
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGTCT-CGCATATCATGGGGAGATAGACGCTGCTGCCTGTGAGTCT  142

seq1  TGGGCCCTGGCAGTTGAGGACGAAGAGCGGGAGGAGGGTGTCAGGACCCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCCTGGCAGTTGAGGACGAAGAGCGGGAGGAGGGTGTCAGGACCCA  192

seq1  GACCCACAGCGGGTCAGTGCTGGAAGAACTAGGCTGTGGAAGAGACGGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACAGCGGGTCAGTGCTGGAAGAACTAGGCTGTGGAAGAGACGGGG  242

seq1  CTGAGGAGCCCAGGCTCTTGGGACGGGACTTGAGGGGTTCGGGCTCGCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAGCCCAGGCTCTTGGGACGGGACTTGAGGGGTTCGGGCTCGCAG  292

seq1  AAGCAGCGGCTGTTGGGGACTCGAGCTCTGAATGAGAGACTTAGGAAACG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCGGCTGTTGGGGACTCGAGCTCTGAATGAGAGACTTAGGAAACG  342

seq1  GGGACGGATGTGGATTCTGCAGCATCTGAGGGAAAGCCTTCTGAGAGGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACGGATGTGGATTCTGCAGCATCTGAGGGAAAGCCTTCTGAGAGGGA  392

seq1  CAGGATGGTGAGGATCCCGCACTTTATAGGAGGCGAGGGTAGGAACGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGGTGAGGATCCCGCACTTTATAGGAGGCGAGGGTAGGAACGAAA  442

seq1  CGGGGCGTGAAGACACAGGCTCCAGAGAGGTAAAAGTGGAGCCCGAGAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCGTGAAGACACAGGCTCCAGAGAGGTAAAAGTGGAGCCCGAGAGG  492

seq1  ACTCGGGCTCCTAAGAGACAGAAGCGGGACAGTAAAGTCCCAGCTCCTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGGCTCCTAAGAGACAGAAGCGGGACAGTAAAGTCCCAGCTCCTAA  542

seq1  GGATTCAGAAACCGGGCAGCAAAGACTTGAGGACTGGAGCTAGAGAAGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAGAAACCGGGCAGCAAAGACTTGAGGACTGGAGCTAGAGAAGGA  592

seq1  GGCAGAGAAGACTTGAATTTGAAAGGGAATCGAAGCGGGCAGTGAGGACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGAAGACTTGAATTTGAAAGGGAATCGAAGCGGGCAGTGAGGACT  642

seq1  GGGTCTTCTTTGGGGACAAGATCCGGGCTTTCAGACTCAAGAGTTTCTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTCTTTGGGGACAAGATCCGGGCTTTCAGACTCAAGAGTTTCTGG  692

seq1  AGGGACAGAGATGTAAGGACCCGAGCTCCTAAAAGTGAAGGAACTAGGGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAGAGATGTAAGGACCCGAGCTCCTAAAAGTGAAGGAACTAGGGG  742

seq1  GTCCTTAACGGCTGGGAGATCAGCCTTCAAGGGAGAAAAGTTGAAAAGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTAACGGCTGGGAGATCAGCCTTCAAGGGAGAAAAGTTGAAAAGGT  792

seq1  TTAGCGATCTGTTCTCTGTACCCGGAGGATTAGGATATATATATTCGGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCGATCTGTTCTCTGTACCCGGAGGATTAGGATATATATATTCGGGG  842

seq1  GAAGACTTCTTGGCGCTGCCTATTTGGCTTTTGGCATTTAGGCTTTTTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTTCTTGGCGCTGCCTATTTGGCTTTTGGCATTTAGGCTTTTTCT  892

seq1  TGTGTCCGTTACTTAACCTAGAAAAGCCACATGAAACGTCTTCGTTTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCGTTACTTAACCTAGAAAAGCCACATGAAACGTCTTCGTTTTTC  942

seq1  TTCATTATTGTGAATCAGATGTGAAGCTGAAAGCAGTTTGAACTCAGTTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTATTGTGAATCAGATGTGAAGCTGAAAGCAGTTTGAACTCAGTTA  992

seq1  TATACTTGATAAGTACCTTAAGCCCTGTTCCATTCAGCCCCCGTTGAGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTGATAAGTACCTTAAGCCCTGTTCCATTCAGCCCCCGTTGAGCA  1042

seq1  CAGATCTCTATATCACTAGCAAACTGTCATAGATGGAAGGGCAGCAAAAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTCTATATCACTAGCAAACTGTCATAGATGGAAGGGCAGCAAAAG  1092

seq1  AACACTTTGAATTC  1113
      ||||||||||||||
seq2  AACACTTTGAATTC  1106

seq1: chr4_131674869_131675401
seq2: B6Ng01-267E09.g_66_598

seq1  GAATTCCTGGTGTATCAGGTTATAGCTGGAGAGCTCTAAGAGTGGAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGTGTATCAGGTTATAGCTGGAGAGCTCTAAGAGTGGAGAAA  50

seq1  GTGACTTTCTGAAAGCAGAGACCAACTGTAGGGTGTGGAAGGGAAAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTTCTGAAAGCAGAGACCAACTGTAGGGTGTGGAAGGGAAAGTGT  100

seq1  GCACCCATTATCATTAACCTAGCACTCAGGAAGCTGAAACAGGAGCATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCATTATCATTAACCTAGCACTCAGGAAGCTGAAACAGGAGCATTA  150

seq1  CAAATTTGAGTCTAGCCTCAGCTTCATCTTGAGACCCTGTCTTGGAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTGAGTCTAGCCTCAGCTTCATCTTGAGACCCTGTCTTGGAAAGA  200

seq1  CAAAAAAATAAATCCTTGGGTATGTTGGTACACACCTGTAATTCCAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAATAAATCCTTGGGTATGTTGGTACACACCTGTAATTCCAGCTC  250

seq1  ATCATACTTCCAAAGGTAACGGGGAACTCTTTGTTTTTGAAAAAGAATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACTTCCAAAGGTAACGGGGAACTCTTTGTTTTTGAAAAAGAATCC  300

seq1  TTCTACATAGCCCTGGCTGTCCTAGAACTCTTTATGTAGACCAGACTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATAGCCCTGGCTGTCCTAGAACTCTTTATGTAGACCAGACTAAT  350

seq1  CTCTAACAGAAACCTGCCTATCTTTGCCTCCTAGGTGCTGGGATTAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACAGAAACCTGCCTATCTTTGCCTCCTAGGTGCTGGGATTAAAGG  400

seq1  CATGCATGCTCCCACAAAGCCCAGCTGGCCAAACTATCTGTTAACGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATGCTCCCACAAAGCCCAGCTGGCCAAACTATCTGTTAACGTTTT  450

seq1  TTTCCTCCAGGATGGATCAGAGGTTTGGGTTTTTTGTGGTTGGTTTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCAGGATGGATCAGAGGTTTGGGTTTTTTGTGGTTGGTTTTGTT  500

seq1  TGTTAGAAAAGAGGAGAAGGAGGAGGAAGAGGA  533
      |||||||||||||||||||||||||||||||||
seq2  TGTTAGAAAAGAGGAGAAGGAGGAGGAAGAGGA  533