BAC Information

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BAC

Clone NameB6Ng01-267F08
Chromosome4 (Build37)X (Build37)
Map Location 10,663,155 - 10,663,72174,155,408 - 74,156,221
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGdf6, 4930448K20Rik, LOC666840
Downstream gene1700123O12Rik, LOC383991, LOC100039656, LOC545589, 2610301B20Rik, LOC383992, LOC100039746, Plekhf2, 2310030N02Rik, LOC546828, LOC666897, Trp53inp1, Ccne2, Ints8, Dpy19l4, Rbm35a, LOC634834, 1110037F02Rik, LOC100039847, E130016E03Rik, LOC100039862, Gem
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267F08.bB6Ng01-267F08.g
ACCGA070483GA070484
length642827
definitionB6Ng01-267F08.b B6Ng01-267F08.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(10,663,155 - 10,663,721)(74,155,408 - 74,156,221)
sequence
gaattccattttgtctggaatactttggttaatacatctatggtaattga
aagtttagctgggtatagtaccctgggctggcatttgtgttctcttaggg
tctgcataaaatctgtccaggatcttctggcttttatagtctctggtgga
aaatcttgtttagttctgataggcctccctttatatcttacttcaactat
ttcccttactgcttttaatattctatctttatttagtgcatttgttgttc
tgattataatgtgcagggaggaatttcttttctggtccagtctatttgga
gttctgtagacttcttgtatgttcatgtgcatctctttctttaagtttgg
gaagttttcttcaataattttgttgaagatatttgctggccctttaagtt
ggaaaacttcattctcatctactcctattatccataggtttggtcttctc
attgtgtcctgggtttcctggatgttttgagttaggatctttttgaattt
tgcattttgattgttgtgcccatgttctctatggaatcttctgcacctga
gattctctcttccatttcttctttttttcctccaattatttttaattaga
tattttcttcatttacatttctaatgctatcccaaaagtccc
gaattctgtttattctgtcctgatcttagaaggtgctagagtacagaggg
acaagacatttgactaaagggtggagacaagattctatctatgaactagg
ggaaatttctatcaatgctggagtgagactttagtggagcctccttgagg
tcacatttgctcctagaaataagccttcatctgtgctctgtagagaagtc
aaaaactcattggttactcaggttgttctttacttgaaatgtgatatggt
ctatcttgggtggcctgtctggagtgagtagatgcttgtgttcgtctccc
caggaagggttaacgttataggatgagtatgggtggggataatgaaaaaa
tgcatagtcagcccaatcaagtattaaaataacttataactgaaacctct
actctaaacatgtgacctaaataagctcattatagatgcactaggatgag
caatgtatgagaacccataatggtgttggatggtctagctaggaggtaga
gatgtccagtagtgaggagatcaaaaatctcacacacagctaatgcttcc
atgccttactccaagtcagaagctatgtgctctctctctttttttaaaac
aaagtagaaagttaccatattgtgaacactccaccagtgtttctcaaggc
attcatccacacaagaacatcatttcttggattttctgtaatctgagaag
ggttttgaaagagatatttctttcttcaagattgtatttgggaatctcag
aggaaatacaaaaagactgtcagttctcaggctgaaaaaataactcaaaa
ggttcaagtgcttttcccctgcaagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_10663155_10663721
seq2: B6Ng01-267F08.b_47_608 (reverse)

seq1  AAGAGATGGAAGAGAGAATCTCAGGTGCAGAAGACTCCATAGAGAACATC  50
      |||| ||||||||||||||||||||||||||||| |||||||||||||| 
seq2  AAGAAATGGAAGAGAGAATCTCAGGTGCAGAAGATTCCATAGAGAACATG  50

seq1  GGCACAACAATCAAAGAAAATGGAAAATGCAAAAAGATCCTAACTCAAAA  100
      ||||||||||||    |||||| ||||| |||||||||||||||||||||
seq2  GGCACAACAATC----AAAATGCAAAATTCAAAAAGATCCTAACTCAAAA  96

seq1  CATCCAGGAAATACAGGACACAATGAGAAGACCAAACCTACGGATAATAG  150
      |||||||||||  ||||||||||||||||||||||||||| |||||||||
seq2  CATCCAGGAAACCCAGGACACAATGAGAAGACCAAACCTATGGATAATAG  146

seq1  GAGTGGATGAGAATGAAGATTTTCAACTCAAAGGACCAGCAAACATCTTC  200
      |||| ||||||||||||| ||| ||||| ||||| |||||||| ||||||
seq2  GAGTAGATGAGAATGAAGTTTTCCAACTTAAAGGGCCAGCAAATATCTTC  196

seq1  AACAAAATTATTGAAGAAAACTTCCCAAATCTAAAGAAAGAGATGCCCAT  250
      |||||||||||||||||||||||||||||  ||||||||||||||| |||
seq2  AACAAAATTATTGAAGAAAACTTCCCAAACTTAAAGAAAGAGATGCACAT  246

seq1  GAACATACAAGAAGCCTACAGAACTCCAAATAGACTGGACCAGAAAAGAA  300
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAACATACAAGAAGTCTACAGAACTCCAAATAGACTGGACCAGAAAAGAA  296

seq1  ATTCCTCCCGACACATAATAATCAGAACACCAAATGCACTAAATAAAGAT  350
      |||||||||  ||||| |||||||||||| ||||||||||||||||||||
seq2  ATTCCTCCCTGCACATTATAATCAGAACAACAAATGCACTAAATAAAGAT  346

seq1  AGAATACTAAAAGCAGTAAGGGAAAAAGGTCAAGTAACATATAAAGGCAA  400
      |||||| |||||||||||||||||| || | |||||| ||||||||| | 
seq2  AGAATATTAAAAGCAGTAAGGGAAATAGTTGAAGTAAGATATAAAGGGAG  396

seq1  GCCTATCAGAATTACACCAGATTTTTCACCAGAGACTATGAAAGCCAGAA  450
      ||||||||||| || || ||||||| ||||||||||||| ||||||||||
seq2  GCCTATCAGAACTAAACAAGATTTTCCACCAGAGACTATAAAAGCCAGAA  446

seq1  GAGCCTGGACAGATGTTATACAGACACTAAGAGAACACAAATGCCAGCCC  500
      || ||||||||||| |||| ||||| ||||||||||||||||||||||||
seq2  GATCCTGGACAGATTTTATGCAGACCCTAAGAGAACACAAATGCCAGCCC  496

seq1  AGGCTACTATACCCAGCCAAACTCTCAATTACCATAGATGGAGAAACCAA  550
      ||| ||||||||||||| ||||| |||||||||||||||| |  ||||||
seq2  AGGGTACTATACCCAGCTAAACTTTCAATTACCATAGATGTATTAACCAA  546

seq1  AGTATTCCACGACAAAA  567
      ||||||||| |||||||
seq2  AGTATTCCA-GACAAAA  562

seq1: chrX_74155408_74156221
seq2: B6Ng01-267F08.g_66_892

seq1  GAATTCTGTTTATTCTGTCCTGATCTTAGAAGGTGCTAGAGTACAGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTATTCTGTCCTGATCTTAGAAGGTGCTAGAGTACAGAGGG  50

seq1  ACAAGACATTTGACTAAAGGGTGGAGAGAAGATTCTATCTATGAACTAGG  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACAAGACATTTGACTAAAGGGTGGAGACAAGATTCTATCTATGAACTAGG  100

seq1  GGAAATTTCTATCAATGCTGGAGTGAGACTTTAGTGGAGCCTCCTTGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTCTATCAATGCTGGAGTGAGACTTTAGTGGAGCCTCCTTGAGG  150

seq1  TCACATTTGCTCCTAGAAATAAGCCTTCATCTGTGCTCTGTAGAGAAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTGCTCCTAGAAATAAGCCTTCATCTGTGCTCTGTAGAGAAGTC  200

seq1  AAAAACTCATTGGTTACTCAGGTTGTTCTTTACTTGAAATGTGATATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTCATTGGTTACTCAGGTTGTTCTTTACTTGAAATGTGATATGGT  250

seq1  CTATCTTGGGTGGCCTGTCTGGAGTGAGTAGATGCTTGTGTTCGTCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTGGGTGGCCTGTCTGGAGTGAGTAGATGCTTGTGTTCGTCTCCC  300

seq1  CAGGAAGGGTTAACGTTATAGGATGAGTATGGGTGGGGATAATGAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGGGTTAACGTTATAGGATGAGTATGGGTGGGGATAATGAAAAAA  350

seq1  TGCATAGTCAGCCCAATCAAGTATTAAAATAACTTATAACTGAAACCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGTCAGCCCAATCAAGTATTAAAATAACTTATAACTGAAACCTCT  400

seq1  ACTCTAAACATGTGACCTAAATAAGCTCATTATAGATGCACTAGGATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAAACATGTGACCTAAATAAGCTCATTATAGATGCACTAGGATGAG  450

seq1  CAATGTATGAGAACCCATAATGGTGTTGGATGGTCTAGCTAGGAGGTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTATGAGAACCCATAATGGTGTTGGATGGTCTAGCTAGGAGGTAGA  500

seq1  GATGTCCAGTAGTGAGGAGATCAAAAATCTCACACACAGCTAATGCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCAGTAGTGAGGAGATCAAAAATCTCACACACAGCTAATGCTTCC  550

seq1  ATGCCTTACTCCAAGTCAGAAGCTATGTGCTCTCTCTCTTTTTTTAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTACTCCAAGTCAGAAGCTATGTGCTCTCTCTCTTTTTTTAAAAC  600

seq1  AAAGTAGAAAGTTACCATATTGTGAACACTCCACCAGTGTTTCTCAAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGAAAGTTACCATATTGTGAACACTCCACCAGTGTTTCTCAAGGC  650

seq1  ATTCATCCACACAAGAACATCATTTC-TGGA-TTTCTGTAATCTGAGAAG  698
      |||||||||||||||||||||||||| |||| ||||||||||||||||||
seq2  ATTCATCCACACAAGAACATCATTTCTTGGATTTTCTGTAATCTGAGAAG  700

seq1  GG-TTTGAAAGAGATATTTC-TTCTTCAAGA-TGTATT--GGAATCTCAG  743
      || ||||||||||||||||| |||||||||| ||||||  ||||||||||
seq2  GGTTTTGAAAGAGATATTTCTTTCTTCAAGATTGTATTTGGGAATCTCAG  750

seq1  AGG-AATAC-AAAAGACTGTCAG-TCTCAGGCTGAAAAAATAACTCAAAA  790
      ||| ||||| ||||||||||||| ||||||||||||||||||||||||||
seq2  AGGAAATACAAAAAGACTGTCAGTTCTCAGGCTGAAAAAATAACTCAAAA  800

seq1  GG-TCAAGTGCTTT--CCCTGCAAGTA  814
      || |||||||||||  |||||||||||
seq2  GGTTCAAGTGCTTTTCCCCTGCAAGTA  827