BAC Information

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BAC

Clone NameB6Ng01-268N12
Chromosome4 (Build37)
Map Location 74,556,423 - 74,557,538
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000004010, 2310002L09Rik, Frmd3, LOC100039774, Jmjd2c, LOC100040258, LOC100039814
Downstream geneLOC636847, 3110001D03Rik, LOC623529, LOC100039833, LOC100039884, LOC667845
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268N12.bB6Ng01-268N12.g
ACCGA071597GA071598
length2631,120
definitionB6Ng01-268N12.b B6Ng01-268N12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atgagaagatatgatttatgaactcacagctgttgtgcttacattcacaa
ggcataaacaatattaccaaaatccctacaaggatgagagaggagttgat
gaggactcacccctaactgtagaactatagtaagaggataagttcttggg
gaagtagataatttttggggtgtgtgaccactggtaagtagcccatgctt
actagatggccccacacctgtgcagcactgatagcagtgtgtgtgtgtat
gtgtgtgtgtttg
gaattctcttcagatttgcctccatatgaggaagggaaggaaattaagat
taagaaatgtaattttttaatctttcccaactttgttcaattctattggg
agaggatgtctatttcagcttcagcaaatatagattgcttgggtaaagat
gagtttgcaaattcagttttgtcaatttaacatagaaaaagttctgtgag
acttggtttgtttgtagactttaacaaaaagagggatggagacatttatc
agaataatggcaaggttgggggtggttttgagctactatccttaaacaat
gaagaggaagaataatcaaatatacactgaaaacacagccccaagtactc
tgaagtgacatttggctgcaatgctttctgactatatgacaatggaagcc
tgttcagctggcttttcccaaagccagagaaaggtccctgagttaaaatg
tcacaatgtatcttattttccatttctcagttctgccttcacatagaact
ttaaaaataacaactgcaaaaacattgaagaaggtgacagtgggaaagga
cagtttataggtgacttgagctttctgatttgaggcacagaggttacaaa
ttttcactgagaagattcagaggaagaacaaaacaaaaaacaaaaaacat
aatctccccaaaagaccatgatcatgtgatgccctggaaagtgattcttg
gatttcatttggaagcagaaattaaagaatagataaaaggtttgtaatga
gattattgtagatcagctgaattatatagacttaagtcctttgcccagga
atagctatcatttggtgacatagaacctgaaatcctgcctaaaggcaaga
tttattcatttcttcttttgaaactaactcccaaaattagacttgcatag
ttaaatataagctggtctctgtgggcaatgggctatgcacagacagactg
gtctccagtggagttgaggttcttgaaccccagtaggacctggttgtcat
agcagcttaatttataaatagcagaagctgaaaaagtacccagaatgtcc
ctcaacagaggatgtataccaaaatgttgttacagttacacaatggtata
tcctagctcagctattaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_74556423_74557538
seq2: B6Ng01-268N12.g_66_1185 (reverse)

seq1  TTTTAATAGCTGAG-TAG--TATTCCATTGTGTAAATGTACCACATTTTT  47
      |||||||||||||| |||  ||| ||||||||||| |||| ||   ||||
seq2  TTTTAATAGCTGAGCTAGGATATACCATTGTGTAACTGTAACAACATTTT  50

seq1  TGTATACATTCCTCTGTTGAGGGACA-TCTGGGTTC-TTTTCAGCTTCTG  95
       ||||||| ||||||||||||||||| ||||||| | |||||||||||| 
seq2  GGTATACA-TCCTCTGTTGAGGGACATTCTGGGTACTTTTTCAGCTTCT-  98

seq1  GCTA-TTATAAATAAGGCTGCTATGAACACCAGGTCCTACTGGGGTTCAA  144
      |||| |||||||| | ||||||||||  ||||||||||||||||||||||
seq2  GCTATTTATAAATTAAGCTGCTATGACAACCAGGTCCTACTGGGGTTCAA  148

seq1  G-ACCTCAACTCCACTGGAGACCAGTCTGTCTGTGCATAGCCCATTGCCC  193
      | ||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAACCTCAACTCCACTGGAGACCAGTCTGTCTGTGCATAGCCCATTG-CC  197

seq1  CACAGAGACCAGCTTATATTTAACTATGCAAGTCTAATTTTGGGAGTTAG  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGACCAGCTTATATTTAACTATGCAAGTCTAATTTTGGGAGTTAG  247

seq1  TTTCAAAAGAAG-AATGAATAAATCTTGCCTTTAGGCAGGATTTCAGGTT  292
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAAGAAGAAATGAATAAATCTTGCCTTTAGGCAGGATTTCAGGTT  297

seq1  CTATGTCACCAAATGATAGCTATTCCTGGGCAAAGGACTTAAGTCTATAT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTCACCAAATGATAGCTATTCCTGGGCAAAGGACTTAAGTCTATAT  347

seq1  AATTCAGCTGATCTACAATAATCTCATTACAAACCTTTTATCTATTCTTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGCTGATCTACAATAATCTCATTACAAACCTTTTATCTATTCTTT  397

seq1  AATTTTCTGCTTCCAAATGAAATCCAAGAATCACTTTCCAGGGCATCACA  442
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-TTTCTGCTTCCAAATGAAATCCAAGAATCACTTTCCAGGGCATCACA  446

seq1  TGATCATGGTCTTTTGGGGAGATTATGTTTTTTGTTTTTTGTTTTGTTCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATGGTCTTTTGGGGAGATTATGTTTTTTGTTTTTTGTTTTGTTCT  496

seq1  TCCTCTGAATCTTCTCAGTGAAAATTTGTAACCTCTGTGCCTCAAATCAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGAATCTTCTCAGTGAAAATTTGTAACCTCTGTGCCTCAAATCAG  546

seq1  AAAGCTCAAGTCACCTATAAACTGTCCTTTCCCACTGTCACCTTCTTCAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCAAGTCACCTATAAACTGTCCTTTCCCACTGTCACCTTCTTCAA  596

seq1  TGTTTTTGCAGTTGTTATTTTTAAAGTTCTATGTGAAGGCAGAACTGAGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGCAGTTGTTATTTTTAAAGTTCTATGTGAAGGCAGAACTGAGA  646

seq1  AATGGAAAATAAGATACATTGTGACATTTTAACTCAGGGACCTTTCTCTG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAAATAAGATACATTGTGACATTTTAACTCAGGGACCTTTCTCTG  696

seq1  GCTTTGGGAAAAGCCAGCTGAACAGGCTTCCATTGTCATATAGTCAGAAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGGAAAAGCCAGCTGAACAGGCTTCCATTGTCATATAGTCAGAAA  746

seq1  GCATTGCAGCCAAATGTCACTTCAGAGTACTTGGGGCTGTGTTTTCAGTG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCAGCCAAATGTCACTTCAGAGTACTTGGGGCTGTGTTTTCAGTG  796

seq1  TATATTTGATTATTCTTCCTCTTCATTGTTTAAGGATAGTAGCTCAAAAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGATTATTCTTCCTCTTCATTGTTTAAGGATAGTAGCTCAAAAC  846

seq1  CACCCCCAACCTTGCCATTATTCTGATAAATGTCTCCATCCCTCTTTTTG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCAACCTTGCCATTATTCTGATAAATGTCTCCATCCCTCTTTTTG  896

seq1  TTAAAGTCTACAAACAAACCAAGTCTCACAGAACTTTTTCTATGTTAAAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTCTACAAACAAACCAAGTCTCACAGAACTTTTTCTATGTTAAAT  946

seq1  TGACAAAACTGAATTTGCAAACTCATCTTTACCCAAGCAATCTATATTTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAACTGAATTTGCAAACTCATCTTTACCCAAGCAATCTATATTTG  996

seq1  CTGAAGCTGAAATAGACATCCTCTCCCAATAGAATTGAACAAAGTTGGGA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCTGAAATAGACATCCTCTCCCAATAGAATTGAACAAAGTTGGGA  1046

seq1  AAGATTAAAAAATTACATTTCTTAATCTTAATTTCCTTCCCTTCCTCATA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAAAAAATTACATTTCTTAATCTTAATTTCCTTCCCTTCCTCATA  1096

seq1  TGGAGGCAAATCTGAAGAGAATTC  1116
      ||||||||||||||||||||||||
seq2  TGGAGGCAAATCTGAAGAGAATTC  1120