BAC Information

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BAC

Clone NameB6Ng01-270D23
Chromosome4 (Build37)
Map Location 35,367,759 - 35,368,905
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665367, 2700059D21Rik, Orc3l, Rars2, Slc35a1, 1700003M02Rik, Gm136, 1810030N24Rik, Zfp292, Cga, Mobkl2b, Ifnk, 3110043O21Rik, LOC620559
Downstream geneLOC621227, Lingo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270D23.bB6Ng01-270D23.g
ACCGA072636GA072637
length1,1461,149
definitionB6Ng01-270D23.b B6Ng01-270D23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatctcataataaggcaacgaagcaaaccagaagtgagcagac
acatgtgctttatatgcagtcaaatggaagtcctttcccttcagatttag
gtaagagtggatctcaaatggcagactttgttccttgccataaccaccga
ggaaaacctccacagcttcccttctgtaaatttcggagagaggctgagag
attttgcacattttaatatgtcatagatgaattttcaaaaatccactgct
tctgaagggagtggaactggcagccctgggccttcgatgcacatttgcta
taccagtgctctatggagctggacaagcattcttcactctagccaacgaa
gggaacttcccatccccttgtccgttctagttcacattcttactttacaa
actgcctgcaacccagggcagcgatgattttcccttgagaggaattgcag
gaagctcttttttctttgtctgggaagattggataccctttctatcccta
tccagacctgaacaatacctgcttccatctgaagtctgtatgcaactttc
cctcctatttaactttctggctccagccagtgggtcaactgtatcttcag
ctaattgtcggtaagttactcagtggacagttgtgctggggcagacactc
tccttccaggtgatagcatgactcacatgcttatcttttggtgatctgga
aacaaattgacttgtcgtatgcgttatgattgtctcctctggacacatgt
ttggttctagtctttccatttagtgtatttagtgtctcacttgcttataa
actttggtcactgtacaaaaggtggaaaggcaagcagaaaagagaaagga
gaatttcctgccctcctctgccagaaagagctttgtaaggacactcacta
ccaaagacttactccataatgtttattggatcttatcatggaaattaaga
ttggatattgttggaaggtgtatcaagtgtgctatcaacaatatcaattt
tgggaacttgaagtgtttcttagactttaggaatgtgaatgtgagatgtg
aacctctacgaaaacataaatataattttgcatagtctttgattgtgtgt
ccccttttctcttgcagagacatctacaagtgttttctatggaaaa
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaagtcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtgggcactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccacgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacaatcagctaatgggatgggatcatagggctcc
caatggaggagctagagaaagtagcccaaggagctaaagggatctgcacc
ctatagtgacacattataaactaccagtacctgagctctgactctagctg
catatatatcaaagatgctagtcgacatcactgaagagaggccaatgtac
tgctactatgcccagttacatgtaacacacggccaaaagggggaatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_35367759_35368905
seq2: B6Ng01-270D23.b_43_1188

seq1  GAATTCTCATCTCATAATAAGGCAACGAAGCAAACCAGAAGTGAGCAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCTCATAATAAGGCAACGAAGCAAACCAGAAGTGAGCAGAC  50

seq1  ACATGTGCTTTATATGCAGTCAAATGGAAGTCCTTTCCCTTCAGATTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGCTTTATATGCAGTCAAATGGAAGTCCTTTCCCTTCAGATTTAG  100

seq1  GTAAGAGTGGATCTCAAATGGCAGACTTTGTTCCTTGCCATAACCACCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGTGGATCTCAAATGGCAGACTTTGTTCCTTGCCATAACCACCGA  150

seq1  GGAAAACCTCCACAGCTTCCCTTCTGTAAATTTCGGAGAGAGGCTGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACCTCCACAGCTTCCCTTCTGTAAATTTCGGAGAGAGGCTGAGAG  200

seq1  ATTTTGCACATTTTAATATGTCATAGATGAATTTTCAAAAATCCACTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCACATTTTAATATGTCATAGATGAATTTTCAAAAATCCACTGCT  250

seq1  TCTGAAGGGAGTGGAACTGGCAGCCCTGGGCCTTCGATGCACATTTGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGGGAGTGGAACTGGCAGCCCTGGGCCTTCGATGCACATTTGCTA  300

seq1  TACCAGTGCTCTATGGAGCTGGACAAGCATTCTTCACTCTAGCCAACGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGTGCTCTATGGAGCTGGACAAGCATTCTTCACTCTAGCCAACGAA  350

seq1  GGGAACTTCCCATCCCCTTGTCCGTTCTAGTTCACATTCTTACTTTACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTTCCCATCCCCTTGTCCGTTCTAGTTCACATTCTTACTTTACAA  400

seq1  ACTGCCTGCAACCCAGGGCAGCGATGATTTTCCCTTGAGAGGAATTGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTGCAACCCAGGGCAGCGATGATTTTCCCTTGAGAGGAATTGCAG  450

seq1  GAAGCTCTTTTTTCTTTGTCTGGGAAGATTGGATACCCTTTCTATCCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCTTTTTTCTTTGTCTGGGAAGATTGGATACCCTTTCTATCCCTA  500

seq1  TCCAGACCTGAACAATACCTGCTTCCATCTGAAGTCTGTATGCAACTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACCTGAACAATACCTGCTTCCATCTGAAGTCTGTATGCAACTTTC  550

seq1  CCTCCTATTTAACTTTCTGGCTCCAGCCAGTGGGTCAACTGTATCTTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTATTTAACTTTCTGGCTCCAGCCAGTGGGTCAACTGTATCTTCAG  600

seq1  CTAATTGTCGGTAAGTTACTCAGTGGACAGTTGTGCTGGGGCAGACACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGTCGGTAAGTTACTCAGTGGACAGTTGTGCTGGGGCAGACACTC  650

seq1  TCCTTCCAGGTGATAGCATGACTCACATGCTTATCTTTTGGTGATCTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCAGGTGATAGCATGACTCACATGCTTATCTTTTGGTGATCTGGA  700

seq1  AACAAATTGACTTGTCGTATGCGTTATGATTGTCTCCTCTGGACACATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATTGACTTGTCGTATGCGTTATGATTGTCTCCTCTGGACACATGT  750

seq1  TTGGTTCTAGTCTTTCCATTTAGTGTATTTAGTGTCTCACTTGCTTATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTCTAGTCTTTCCATTTAGTGTATTTAGTGTCTCACTTGCTTATAA  800

seq1  ACTTTGGTCACTGTACAAAAGGTGGAAAGGCAAGCAGAAAAGAGAAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGTCACTGTACAAAAGGTGGAAAGGCAAGCAGAAAAGAGAAAGGA  850

seq1  GAATTTCCTGCCCTCCTCTGCCAGAAAGAGCTTTGTAAGGACACTCACTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCCTGCCCTCCTCTGCCAGAAAGAGCTTTGTAAGGACACTCACTA  900

seq1  CCAAAGACTTACTCCATAATGTTTATTGGATCTTATCATGG-AATTAAGA  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCAAAGACTTACTCCATAATGTTTATTGGATCTTATCATGGAAATTAAGA  950

seq1  TTGGATATTGTTGGAAGGTGTATCAAGTGTGCTATCAACAATATCAATTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATATTGTTGGAAGGTGTATCAAGTGTGCTATCAACAATATCAATTT  1000

seq1  T-GGAACTTGAAGTGTTTCTTAGACTTTTAGGAATGTGAATGTGAGATGT  1048
      | ||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGGGAACTTGAAGTGTTTCTTAGAC-TTTAGGAATGTGAATGTGAGATGT  1049

seq1  GAACCTCTACGAAAACAATAAATATAA-TTTGCATAGGTCTTTGATTGTG  1097
      |||||||||||||||| |||||||||| |||||||| |||||||||||||
seq2  GAACCTCTACGAAAAC-ATAAATATAATTTTGCATA-GTCTTTGATTGTG  1097

seq1  TGTCCCCTTTTCTTCTTGCAAGAGGACATCTTACAGTG--TTCTATGAAA  1145
      |||||||||||| |||||| ||| |||||||   ||||  ||||||| ||
seq2  TGTCCCCTTTTC-TCTTGC-AGA-GACATCTACAAGTGTTTTCTATGGAA  1144

seq1  AA  1147
      ||
seq2  AA  1146