BAC Information

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BAC

Clone NameB6Ng01-270K02
Chromosome4 (Build37)
Map Location 68,268,478 - 68,269,604
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433715, Tcp1-ps1
Downstream geneDbc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270K02.bB6Ng01-270K02.g
ACCGA072921GA072922
length1,2131,106
definitionB6Ng01-270K02.b B6Ng01-270K02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacttgtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatatccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggaggtacagagacaaagtttggagctgagataa
aaagatggaccatgtagagaatgccatatcctgggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctttctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatggtcccca
atgaaaggagctagagaaagtacccaaggagctaaagggatctgcaacct
ataggtggaacacattatgactacagtaccccggagctcttgactctagc
tgcatattgtatcaaagatggctaggcggcatcactgggaaagagaggtc
catggacaccgcaacttttatattgccagtacagggacgctcaggctaaa
acggcactgggttggccaagggggaattcggcaattgactgcacgtcggt
cgtgtatgcgctg

gaattcattttgtttttaatagtacttgggctattcaaattatctgttcc
atgaatagtgagttgaggtttgtgtctttgcatttcttcacagttgtaag
attcatgtgtagagtcagtttatttgtttgttatccacttgattttcgta
ggaacacagctatatcttgagcttgggttcagaaattagtaggttgtaat
ttcttcataagtattcctaaattcgtcctcatttttcaatccaggataaa
ttgataaatttaaataactaagacctatacttcccatttttttatttatt
catttatttatttatttatttatttatttatttatttccaggataaattg
ataaatttaaataactaatacctatactttctattaattaattaattaat
taatttatttatttatttatttaggtttttcaagacagggtttctctgta
tagtcctggctgtcctgaaactcactctgtagaccaggctggcctagaac
tcagaaatccgcctgcttcggcctcccaaatgctggagtaaaggcatgtg
ccaccactgccctgttcaagatctatacatttttttttctttagatttac
atatactttactgtttcggtggttttttctattgaatcacattgctgttc
aatcacatttctatctttaaaggatagctttttgctagatttgctttctt
tagtgcttttttttttttctcaagttgtgaccaagtccatgacaagatgt
atgtcacaggagaaagagttgcatcatggtttgatgcgaattttatcatt
gcttggaagcaatggaggaaggtagaacatcacacagcttttgtggtaga
aactgctcacatgttagtaggtagggatgtggaggaaagctagcaatagc
caaagcagtccagagctttgtttagcacacttactcagcacactcgcttt
caccatttatttttacatttgtcctaggatgcccaacatattattgtatc
aaacacgcaatatatgtacattgtgcctcaacattagagtatagccataa
atatttaagaaagtgacttagctgaataattggaattaacttctaacatc
tgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_68268478_68269604
seq2: B6Ng01-270K02.g_65_1170 (reverse)

seq1  AAAACAGTATGTATAGAAGTTAAATACAATTTATTCAGCCTAAAGTTCAC  50
      ||||||| |||| |||||||||| | ||| |||||||| ||||   ||||
seq2  AAAACAG-ATGT-TAGAAGTTAATTCCAA-TTATTCAG-CTAA--GTCAC  44

seq1  TTTCTTTAAAATATTTATGGCTTATTAACCTCTAAATGTTGA-GCACAAT  99
      ||||||  |||||||||||||    ||  |||| |||||||| |||||||
seq2  TTTCTT--AAATATTTATGGC----TATACTCT-AATGTTGAGGCACAAT  87

seq1  GTACATATATTTGCGTGTTTGATACAAATTAATTATGTTGGGCATCCTAA  149
      ||||||||| |||||||||||||||||  ||| ||||||||||||||| |
seq2  GTACATATA-TTGCGTGTTTGATACAA--TAA-TATGTTGGGCATCCT-A  132

seq1  GAACAAATTGTAAAAATTAAATGGTGAAAGGCGAGTGTGCTGAAGTAAGT  199
      | ||||| |||||||| |||||||||||| |||||||||||| |||||||
seq2  GGACAAA-TGTAAAAA-TAAATGGTGAAA-GCGAGTGTGCTG-AGTAAGT  178

seq1  GTGCTAAACAAAGCTCTGGACTGCTTTGGCTATTGCTAGCTTTCCTCCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAAACAAAGCTCTGGACTGCTTTGGCTATTGCTAGCTTTCCTCCAC  228

seq1  ATCCCTACCTACTAACATGTGAGCAGTTTCTACCACAAAAGCTGTGTGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTACCTACTAACATGTGAGCAGTTTCTACCACAAAAGCTGTGTGAT  278

seq1  GTTCTACCTTCCTCCATTGCTTCCAAGCAATGATAAAATTCGCATCAAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTACCTTCCTCCATTGCTTCCAAGCAATGATAAAATTCGCATCAAAC  328

seq1  CATGATGCAACTCTTTCTCCTGTGACATACATCTTGTCATGGACTTGGTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGCAACTCTTTCTCCTGTGACATACATCTTGTCATGGACTTGGTC  378

seq1  ACAACTTGAGAAAAAAAAAAAAGCACTAAAGAAAGCAAATCTAGCAAAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTGAGAAAAAAAAAAAAGCACTAAAGAAAGCAAATCTAGCAAAAA  428

seq1  GCTATCCTTTAAAGATAGAAATGTGATTGAACAGCAATGTGATTCAATAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCTTTAAAGATAGAAATGTGATTGAACAGCAATGTGATTCAATAG  478

seq1  AAAAAACCACCGAAACAGTAAAGTATATGTAAATCTAAAGAAAAAAAAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCACCGAAACAGTAAAGTATATGTAAATCTAAAGAAAAAAAAAT  528

seq1  GTATAGATCTTGAACAGGGCAGTGGTGGCACATGCCTTTACTCCAGCATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGATCTTGAACAGGGCAGTGGTGGCACATGCCTTTACTCCAGCATT  578

seq1  TGGGAGGCCGAAGCAGGCGGATTTCTGAGTTCTAGGCCAGCCTGGTCTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCCGAAGCAGGCGGATTTCTGAGTTCTAGGCCAGCCTGGTCTAC  628

seq1  AGAGTGAGTTTCAGGACAGCCAGGACTATACAGAGAAACCCTGTCTTGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGTTTCAGGACAGCCAGGACTATACAGAGAAACCCTGTCTTGAA  678

seq1  AAACCTAAATAAATAAATAAATAAATTAATTAATTAATTAATTAATAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTAAATAAATAAATAAATAAATTAATTAATTAATTAATTAATAGAA  728

seq1  AGTATAGGTATTAGTTATTTAAATTTATCAATTTATCCTGGAAATAAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGGTATTAGTTATTTAAATTTATCAATTTATCCTGGAAATAAATA  778

seq1  AATAAATAAATAAATAAATAAATAAATGAATAAATAAAAAAATGGGAAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATAAATAAATAAATAAATGAATAAATAAAAAAATGGGAAGT  828

seq1  ATAGGTCTTAGTTATTTAAATTTATCAATTTATCCTGGATTGAAAAATGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTCTTAGTTATTTAAATTTATCAATTTATCCTGGATTGAAAAATGA  878

seq1  GGACGAATTTAGGAATACTTATGAAGAAATTACAACCTACTAATTTCTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGAATTTAGGAATACTTATGAAGAAATTACAACCTACTAATTTCTGA  928

seq1  ACCCAAGCTCAAGATATAGCTGTGTTCCTACGAAAATCAAGTGGATAACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGCTCAAGATATAGCTGTGTTCCTACGAAAATCAAGTGGATAACA  978

seq1  AACAAATAAACTGACTCTACACATGAATCTTACAACTGTGAAGAAATGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATAAACTGACTCTACACATGAATCTTACAACTGTGAAGAAATGCA  1028

seq1  AAGACACAAACCTCAACTCACTATTCATGGAACAGATAATTTGAATAGCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACAAACCTCAACTCACTATTCATGGAACAGATAATTTGAATAGCC  1078

seq1  CAAGTACTATTAAAAACAAAATGAATTC  1127
      ||||||||||||||||||||||||||||
seq2  CAAGTACTATTAAAAACAAAATGAATTC  1106


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