BAC Information

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BAC

Clone NameB6Ng01-272B02
Chromosome4 (Build37)
Map Location 51,991,426 - 51,992,542
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666681, LOC100040814, LOC384015
Downstream geneLOC100041026, LOC100041038, LOC666724, Smc2, LOC100040883, 4930547C10Rik, LOC100040908, LOC666761, Olfr275, Olfr274-ps1, Olfr273, LOC230185, Olfr272, Olfr271-ps1, Olfr270
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272B02.bB6Ng01-272B02.g
ACCGA073985GA073986
length1,0111,117
definitionB6Ng01-272B02.b B6Ng01-272B02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtgttct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaggttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagttttttatcat
acagatctttcacttcctttcgttagagtcacgccgagattattttatat
tatttgtggctattgagaaggtgttgtttccctaatttctttctcagcct
gtttattcttt
gaattctctcttgtttctcttaaattgtctgatttccagtgtttccatat
tgagaactatgaaacaagctggctaaactatttatttgattatttattta
tttatttatttatttatttatttaatttatttatttctgtgcaattggca
caatgaatggcagtttcaattactttctgtatctctgtgaaaagagatat
tcagtatcccaattagatgaaagagaaagcaacaaagtattgggggagaa
aaacaagaacagaatagaattggaaatgaggatggatattaattatccaa
aagaccttcaaagttgcatcagggaaaagttcatttttgttttcagcctg
acaaatccacacaacctcagtcatggctacaaaaggcaggtgcttccttt
gcccttgcagaggaataaatcgtgatgagtcttaatgtgcctcagcatac
tttctcgaaagctttgctaatgcatgctggtttacctacaacacgttttc
cagaaactgttgagtgaaacgacaacacatatacttagtttcacacttta
gtctgtccaattaacagtgttcgctgtgctggctgtgagcccgaaagagg
atttaattttaagtacagtggtctagttaacaaaaaagaaatggggggaa
ggctgactcatgaatgttcagagtgttagactctaatcgtttgtttctgc
aaaattgctctgtattgctattactgggagctgctcaaagtattcgctcc
tgaaattctataaagaaatggctttaagctgttagagtgggcagtatgat
ctctgtttaaaaattacaggacatcttaggcaggccataaaaaccctcag
ggatcaataattatgtaagagttttaaaacaggccaaaagagaaataaaa
atagattcacttttaatggattattaattattttaattcatttaatatct
aggcaatatatagcttctctctaggataactgaaatctgggggctacata
tgctacttaacaataggtaacataaaaaacatatgtaattaaaaatacaa
atgattgttttgtgaaataggtgttatttataagtgaaccagaaatcctt
ctcattattaatgacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_51991426_51992542
seq2: B6Ng01-272B02.g_67_1183

seq1  GAATTCTCTCTTGTTTCTCTTAAATTGTCTGATTTCCAGTGTTTCCATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTTGTTTCTCTTAAATTGTCTGATTTCCAGTGTTTCCATAT  50

seq1  TGAGAACTATGAAACAAGCTGGCTAAACTATTTATTTGATTATTTATTTA  100
      |||||||||||||||||||||||||||||||||||||||    |||||||
seq2  TGAGAACTATGAAACAAGCTGGCTAAACTATTTATTTGA----TTATTTA  96

seq1  TTTATTTATTTATTTATTTATTTATTTAATTTATTTATTTCTGTGCAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTATTTATTTATTTATTTAATTTATTTATTTCTGTGCAATT  146

seq1  GGCACAATGAATGGCAGTTTCAATTACTTTCTGTATCTCTGTGAAAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAATGAATGGCAGTTTCAATTACTTTCTGTATCTCTGTGAAAAGAG  196

seq1  ATATTCAGTATCCCAATTAGATGAAAGAGAAAGCAACAAAGTATTGGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAGTATCCCAATTAGATGAAAGAGAAAGCAACAAAGTATTGGGGG  246

seq1  AGAAAAACAAGAACAGAATAGAATTGGAAATGAGGATGGATATTAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACAAGAACAGAATAGAATTGGAAATGAGGATGGATATTAATTAT  296

seq1  CCAAAAGACCTTCAAAGTTGCATCAGGGAAAAGTTCATTTTTGTTTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGACCTTCAAAGTTGCATCAGGGAAAAGTTCATTTTTGTTTTCAG  346

seq1  CCTGACAAATCCACACAACCTCAGTCATGGCTACAAAAGGCAGGTGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACAAATCCACACAACCTCAGTCATGGCTACAAAAGGCAGGTGCTTC  396

seq1  CTTTGCCCTTGCAGAGGAATAAATCGTGATGAGTCTTAATGTGCCTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCCTTGCAGAGGAATAAATCGTGATGAGTCTTAATGTGCCTCAGC  446

seq1  ATACTTTCTCGAAAGCTTTGCTAATGCATGCTGGTTTACCTACAACACGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTCTCGAAAGCTTTGCTAATGCATGCTGGTTTACCTACAACACGT  496

seq1  TTTCCAGAAACTGTTGAGTGAAACGACAACACATATACTTAGTTTCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAAACTGTTGAGTGAAACGACAACACATATACTTAGTTTCACAC  546

seq1  TTTAGTCTGTCCAATTAACAGTGTTCGCTGTGCTGGCTGTGAGCCCGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCTGTCCAATTAACAGTGTTCGCTGTGCTGGCTGTGAGCCCGAAA  596

seq1  GAGGATTTAATTTTAAGTACAGTGGTCTAGTTAACAAAAAAGAAATGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTTAATTTTAAGTACAGTGGTCTAGTTAACAAAAAAGAAATGGGG  646

seq1  GGAAGGCTGACTCATGAATGTTCAGAGTGTTAGACTCTAATCGTTTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCTGACTCATGAATGTTCAGAGTGTTAGACTCTAATCGTTTGTTT  696

seq1  CTGCAAAATTGCTCTGTATTGCTATTACTGGGAGCTGCTCAAAGTATTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAATTGCTCTGTATTGCTATTACTGGGAGCTGCTCAAAGTATTCG  746

seq1  CTCCTGAAATTCTATAAAGAAATGGCTTTAAGCTGTTAGAGTGGGCAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAAATTCTATAAAGAAATGGCTTTAAGCTGTTAGAGTGGGCAGTA  796

seq1  TGATCTCTGTTTAAAAATTACAGGACATCTTAGGCAGGCCATAAAAACCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTCTGTTTAAAAATTACAGGACATCTTAGGCAGGCCATAAAAACCC  846

seq1  TCAGGGATCAATAATTATGTAAGAGTTTTAAAACAGGCCAAAAGAGAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGATCAATAATTATGTAAGAGTTTTAAAACAGGCCAAAAGAGAAAT  896

seq1  AAAAATAGATTCACTTTTAATGGATTATTAATTTATTTTATTCATTTAAT  950
      |||||||||||||||||||||||||||||||||  ||| |||||||||||
seq2  AAAAATAGATTCACTTTTAATGGATTATTAATTATTTTAATTCATTTAAT  946

seq1  ATCTAGGCAATATATAGCTTCTCTCTAGGAT-ACTG-AATCTGGGGGCTA  998
      ||||||||||||||||||||||||||||||| |||| |||||||||||||
seq2  ATCTAGGCAATATATAGCTTCTCTCTAGGATAACTGAAATCTGGGGGCTA  996

seq1  CATATGCTACTTAAC-ATA-GTAACAT-AAAAACATATGTAATTTAAAAA  1045
      ||||||||||||||| ||| ||||||| |||||||||||||| |||||||
seq2  CATATGCTACTTAACAATAGGTAACATAAAAAACATATGTAA-TTAAAAA  1045

seq1  TACAAATGATTGTTTTGTGAAATAGGGTGTTATTTATAAGTG-ACCAGAA  1094
      |||||||||||||||||||||||| ||||||||||||||||| |||||||
seq2  TACAAATGATTGTTTTGTGAAATA-GGTGTTATTTATAAGTGAACCAGAA  1094

seq1  ATCCTTCTCATTATTATTGACTA  1117
      |||||||||||||||| ||||||
seq2  ATCCTTCTCATTATTAATGACTA  1117