BAC Information

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BAC

Clone NameB6Ng01-272I20
Chromosome4 (Build37)
Map Location 37,737,688 - 37,738,725
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042132, LOC545600, LOC621458
Downstream geneLOC277771, LOC100039448, LOC665520
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272I20.bB6Ng01-272I20.g
ACCGA074350GA074351
length1,1941,033
definitionB6Ng01-272I20.b B6Ng01-272I20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagtggaggaataccgaatcgctgtgatgcacctaagaaaatg
ttctcagtccttagtcatcaaggaaatgcaaatcaaaataaccctgaggt
tctacctcataccagtcagaattcctaaggtcataaactcaggtgacagc
acatgctgggaaggatgtggagaaagaggaacactactccatcactggag
ggattgcaaagtgctacaaccattgtggaaatcagtctggcactaccata
ataattggacatagtactatctgaggacccactaatatcactcctcagtg
tacactcagaagatgctccaacatgaaataagaacacatgttccactatg
tttatagcagctttattataattgccagaagatggaaataacccagatgt
ctgtcaatgggtagagaaattgtggtacacaatggagtactatgcaggtt
ttaaaaacaatgaatttatgaatttcataggcaaatggatggatctggag
gatatcatcctgagtgaggtaacccactcataaagaacacacattatatg
tactcactgataagttgatattagcctagaagctcagaatacccaagata
caatttgcaaaacacatgaaactcaaaacgatggaagaccatagtgagga
tactttgatccttcttagaaggggaaataagatacccatataaggagatg
cagtggcaaagtgtcaaacagagcctgaagaaatatccatccatagactt
ccccacctggggatccatcccatatacaaccaccaaactcagacactata
gtggatataaacaaaggcttgttgacagtagtctgatatagctttctctt
gagaggctctgccagtgcctgacaaatacagaatttggtgctctcagcca
actattggactgagcacagggtccccaatgaagaaggagctagaggaagt
acccaaggagctgaagggttgcaaaccataggaggaacacatatgaacta
atcagtatgcccagagctcctggcactaaaccaccaagtaaagaaatcac
atggtggggagtcatggctcttagtttcatatgtagcagagatgctatgg
ctatcaggtgggaggagaggcctggtcagtgaaaggtcttgccgatagga
attcaatgccaacagtgcgaagttgggttgggcttactgtagca

gaattcaaacacctaagcatatgggagacattgtaataaaagaggaaatt
gatataatttttctgttagcattattaatgatattattttgctttaattg
caaatggcagaaatcactgattatactattataagaatcagggaactata
cagactacacttcttcattcaagttacagtaacactttaactggagtttt
gttttcaaataatctatctacatctatctactgtaaaaacacattcagaa
tgtcattcttatctttcaggtatattaaaagaacatatacatgtatgcta
ttctaaattttttatgaagcgttttttttctagtatttctttctttattt
tgtaagcacatggtgcctcatgcataaactgaattattttaggtggaaca
cctaaaagtaagattgagtggctaccagcttttccagctttgtgtgtgtg
tgtggtttttcttttttcttttcttttcttttctttttttttttagtgtt
cataaatgtaactgtttatttccaatgtccttagtatgatacattaaagt
ttgggaattttttccataaaggtttttattcatgaatacttggtattttt
tttaaatgatgataaatgatatattctctagatttacaaattggcatcaa
tttgttaaatacagaaaggcagggaagtttacatactaagttttatggca
gaaagctcgctaagctcccttaataagtctgataacttatcagtaattat
ctttttttcctttttttatttattatgtattttcctcaatgacatttcca
atgctatcccccaaagtcccccataccctcccccccccacttccctaccc
acccattctcatttttttggccctggcattcccctgtactgggtatatat
agtttgtgtgtccgatgggcctctcctttcattgatggccgactagccat
ctttgatacatattgcaagctagagtcagagctcaaggcactggtagttc
atacgtgttgcaccttacaggttgcagaaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37737688_37738725
seq2: B6Ng01-272I20.g_63_1095 (reverse)

seq1  AGATATCTGCAACCCTGT-AGGTGCAACAACGTTATGAACTAACCAGTAC  49
      |||| ||||||| ||||| ||||||||| ||| |||||||| ||||||  
seq2  AGATTTCTGCAA-CCTGTAAGGTGCAAC-ACG-TATGAACT-ACCAGT-G  45

seq1  CCTGGAGCTCTTGACTCTAGC-TGC-ATATGTATCAAAAGATGGCCTAGT  97
      ||| |||||| |||||||||| ||| ||||||||| |||||||| |||||
seq2  CCTTGAGCTC-TGACTCTAGCTTGCAATATGTATC-AAAGATGG-CTAGT  92

seq1  CGGCCATCAATGGAAAGAGAGGCCCATCGGACACACAAACTATATATGCC  147
      |||||||||||| || |||||||||||||||||||||||||||||||  |
seq2  CGGCCATCAATGAAAGGAGAGGCCCATCGGACACACAAACTATATAT-AC  141

seq1  CCAGTACAGGGGAATGCCAGGGCCAAAAAAATGAGAATGGGTGGGTAGGG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACAGGGGAATGCCAGGGCCAAAAAAATGAGAATGGGTGGGTAGGG  191

seq1  AAGTGGGGGGGGGAGGGTATGGGGGACTTT-GGGGATAGCATTGGAAATG  246
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAGTGGGGGGGGGAGGGTATGGGGGACTTTGGGGGATAGCATTGGAAATG  241

seq1  TCATTGAGGAAAATACATAATAAATAAAAAAAGGAAAAAAAGATAATTAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAGGAAAATACATAATAAATAAAAAAAGGAAAAAAAGATAATTAC  291

seq1  TGATAAGTTATCAGACTTATTAAGGGAGCTTAGCGAGCTTTCTGCCATAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGTTATCAGACTTATTAAGGGAGCTTAGCGAGCTTTCTGCCATAA  341

seq1  AACTTAGTATGTAAACTTCCCTGCCTTTCTGTATTTAACAAATTGATGCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGTATGTAAACTTCCCTGCCTTTCTGTATTTAACAAATTGATGCC  391

seq1  AATTTGTAAATCTAGAGAATATATCATTTATCATCATTTAAAAAAAATAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTAAATCTAGAGAATATATCATTTATCATCATTTAAAAAAAATAC  441

seq1  CAAGTATTCATGAATAAAAACCTTTATGGAAAAAATTCCCAAACTTTAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATTCATGAATAAAAACCTTTATGGAAAAAATTCCCAAACTTTAAT  491

seq1  GTATCATACTAAGGACATTGGAAATAAACAGTTACATTTATGAACACTAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATACTAAGGACATTGGAAATAAACAGTTACATTTATGAACACTAA  541

seq1  AAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAACCACACACACACA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAACCACACACACACA  591

seq1  CAAAGCTGGAAAAGCTGGTAGCCACTCAATCTTACTTTTAGGTGTTCCAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTGGAAAAGCTGGTAGCCACTCAATCTTACTTTTAGGTGTTCCAC  641

seq1  CTAAAATAATTCAGTTTATGCATGAGGCACCATGTGCTTACAAAATAAAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATAATTCAGTTTATGCATGAGGCACCATGTGCTTACAAAATAAAG  691

seq1  AAAGAAATACTAGAAAAAAAACGCTTCATAAAAAATTTAGAATAGCATAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATACTAGAAAAAAAACGCTTCATAAAAAATTTAGAATAGCATAC  741

seq1  ATGTATATGTTCTTTTAATATACCTGAAAGATAAGAATGACATTCTGAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATGTTCTTTTAATATACCTGAAAGATAAGAATGACATTCTGAAT  791

seq1  GTGTTTTTACAGTAGATAGATGTAGATAGATTATTTGAAAACAAAACTCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTACAGTAGATAGATGTAGATAGATTATTTGAAAACAAAACTCC  841

seq1  AGTTAAAGTGTTACTGTAACTTGAATGAAGAAGTGTAGTCTGTATAGTTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAGTGTTACTGTAACTTGAATGAAGAAGTGTAGTCTGTATAGTTC  891

seq1  CCTGATTCTTATAATAGTATAATCAGTGATTTCTGCCATTTGCAATTAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTCTTATAATAGTATAATCAGTGATTTCTGCCATTTGCAATTAAA  941

seq1  GCAAAATAATATCATTAATAATGCTAACAGAAAAATTATATCAATTTCCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATAATATCATTAATAATGCTAACAGAAAAATTATATCAATTTCCT  991

seq1  CTTTTATTACAATGTCTCCCATATGCTTAGGTGTTTGAATTC  1038
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTACAATGTCTCCCATATGCTTAGGTGTTTGAATTC  1033


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