BAC Information

Click to search

BAC

Clone NameB6Ng01-272K15
Chromosome4 (Build37)
Map Location 55,959,364 - 55,960,542
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp462, LOC670211, Rad23b, LOC666953, LOC100041348, Klf4
Downstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1, D730040F13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272K15.bB6Ng01-272K15.g
ACCGA074434GA074435
length1,1591,177
definitionB6Ng01-272K15.b B6Ng01-272K15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagccaaaccatatacttcatagttgtgtgattgtaaaagtac
caggtacagagggtgcacctgtagaaaactgaggatgaagaacaaaatgg
ctttttaaatgacaaggaaatctgctcagtgatttcctttatctcaacca
cactacccattaaaagttattcccggaagtttatcccagccagtgctcca
tctatcttttgcagagtagatcatgctttctgaaagatactgatgttgct
tatgatcattgatggaccaaagtcaatgtcaacatcagcttacgggaggg
cactagtaggcaggaagagcataaccacatgcagaactactttggtatcc
cgtgcccttccttctttgtatgagtgattgtggatgacatagtccatcct
aataaatacccgtgttctcctctatgctttccagatgtggacatcacggt
gaggaggattatgatggcaaactggaggactgttttatattagagcaagc
cctatgagcaggatgttggcttgtggcttaaaggagttgttagctaggtt
tattttagctccagaattcttcttcttcccctttggaatatttgaatttt
aaataaaaataaatttttcctttgctgtattctgggactttaaatatacc
ctgttggatgtacaaaagccctaaaagcatttgtggggtgatcatctcac
ataggcatgaaagtgtttgcatgacatttatcaaacatgttagagagcaa
gtcctggcttggataggtatgttaatatcaacgaccttttcttaatatac
tctccccttgcattcaagagagaatttcttccattaactgaaagccactc
atcaacagtgacctctggtctttctaatttgtggttgggctttaagatgc
attccaagctattcagaagtgctgctggaagaaagaaaaacaattcattg
ggccaacttctcttgttaatacagtcactcctacccagccattagactct
ttgggtgaagtagcctgtgttcagaacacatccatgtgttggatgcttca
gaaagtatggcagtccctaatccacgactattccttaagagactattctc
agaaagatgagatgtctctactaccccacaagagcagtaagactctgata
gagccatag
gaattcttacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcatggaaatgcaagtcaaaacaaccctgatat
tccacctcacaccagtcagaatggctaagatcaaaaattcaagtgacagc
agatgctggcaaagatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagtttatacaaccactctggaaatcagtctggcggctcctca
gaaaattggacatagtactaccggaggatcccgaaatacctctcctgggc
atatatacagaagatgttacaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagctagaaactggaaagaacagagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgagtttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagctccaaacc
taggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagatgtggatgctcacagtcagctaatggatgggatcacagggcctcc
caatgggaggagctagagaaagaacccaaggagctaaagggatctgccaa
ccctatatgtggaacaacattatgaactaaccagtacccgggagctctga
ctctagcttgcaatatgtatcaaagatgctagtcgtcaatccacctgcaa
gagaggccatgacacgcaaaatttatatgccagttacaggtacgtcaggg
tcaaaagggagtggctgtgcatagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_55959364_55960542
seq2: B6Ng01-272K15.b_44_1202

seq1  GAATTCAAAGCCAAACCATATACTTCATAGTTGTGTGATTGTAAAAGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCCAAACCATATACTTCATAGTTGTGTGATTGTAAAAGTAC  50

seq1  CAGGTACAGAGGGTGCACCTGTAGAAAACTGAGGATGAAGAACAAAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACAGAGGGTGCACCTGTAGAAAACTGAGGATGAAGAACAAAATGG  100

seq1  CTTTTTAAATGACAAGGAAATCTGCTCAGTGATTTCCTTTATCTCAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAATGACAAGGAAATCTGCTCAGTGATTTCCTTTATCTCAACCA  150

seq1  CACTACCCATTAAAAGTTATTCCCGGAAGTTTATCCCAGCCAGTGCTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACCCATTAAAAGTTATTCCCGGAAGTTTATCCCAGCCAGTGCTCCA  200

seq1  TCTATCTTTTGCAGAGTAGATCATGCTTTCTGAAAGATACTGATGTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTTTTGCAGAGTAGATCATGCTTTCTGAAAGATACTGATGTTGCT  250

seq1  TATGATCATTGATGGACCAAAGTCAATGTCAACATCAGCTTACGGGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCATTGATGGACCAAAGTCAATGTCAACATCAGCTTACGGGAGGG  300

seq1  CACTAGTAGGCAGGAAGAGCATAACCACATGCAGAACTACTTTGGTATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGTAGGCAGGAAGAGCATAACCACATGCAGAACTACTTTGGTATCC  350

seq1  CGTGCCCTTCCTTCTTTGTATGAGTGATTGTGGATGACATAGTCCATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCCCTTCCTTCTTTGTATGAGTGATTGTGGATGACATAGTCCATCCT  400

seq1  AATAAATACCCGTGTTCTCCTCTATGCTTTCCAGATGTGGACATCACGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATACCCGTGTTCTCCTCTATGCTTTCCAGATGTGGACATCACGGT  450

seq1  GAGGAGGATTATGATGGCAAACTGGAGGACTGTTTTATATTAGAGCAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGATTATGATGGCAAACTGGAGGACTGTTTTATATTAGAGCAAGC  500

seq1  CCTATGAGCAGGATGTTGGCTTGTGGCTTAAAGGAGTTGTTAGCTAGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGAGCAGGATGTTGGCTTGTGGCTTAAAGGAGTTGTTAGCTAGGTT  550

seq1  TATTTTAGCTCCAGAATTCTTCTTCTTCCCCTTTGGAATATTTGAATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGCTCCAGAATTCTTCTTCTTCCCCTTTGGAATATTTGAATTTT  600

seq1  AAATAAAAATAAATTTTTCCTTTGCTGTATTCTGGGACTTTAAATATACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAATAAATTTTTCCTTTGCTGTATTCTGGGACTTTAAATATACC  650

seq1  CTGTTGGATGTACAAAAGCCCTAAAAGCATTTGTGGGGTGATCATCTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGATGTACAAAAGCCCTAAAAGCATTTGTGGGGTGATCATCTCAC  700

seq1  ATAGGCATGAAAGTGTTTGCATGACATTTATCAAACATGTTAGAGAGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCATGAAAGTGTTTGCATGACATTTATCAAACATGTTAGAGAGCAA  750

seq1  GTCCTGGCTTGGATAGGTATGTTAATATCAACGACCTTTTCTTAATATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGCTTGGATAGGTATGTTAATATCAACGACCTTTTCTTAATATAC  800

seq1  TCTCCCCTTGCATTCAAGAGAGAATTTCTTCCATTAACTGAAAGCCACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCTTGCATTCAAGAGAGAATTTCTTCCATTAACTGAAAGCCACTC  850

seq1  ATCAACAGTGACCTCTGGTCTTTCTAATTTGTGGTTGGCCTTTAAGATGC  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATCAACAGTGACCTCTGGTCTTTCTAATTTGTGGTTGGGCTTTAAGATGC  900

seq1  ATTCCAAGCTATTCAGAAGTGCTGCTGGAAGAAAGAAAAACAATTCATT-  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTCCAAGCTATTCAGAAGTGCTGCTGGAAGAAAGAAAAACAATTCATTG  950

seq1  GGCCAACTTCTCTTGTTAATACAGGTCACTCCTACCCAGCCATTAGACTC  999
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGCCAACTTCTCTTGTTAATACA-GTCACTCCTACCCAGCCATTAGACTC  999

seq1  TTTGGGGTGAAGGTAGCCTGTGTTCAGAACACATCCATGTGTTGGGAATG  1049
      ||| ||||||| |||||||||||||||||||||||||||||||||  |||
seq2  TTT-GGGTGAA-GTAGCCTGTGTTCAGAACACATCCATGTGTTGG--ATG  1045

seq1  CTTCAGGAAAGGTATGGCCAGTCCCTAAAGGCACAGACTATTCCTT-AGA  1098
      ||||||  || |||||| |||||||| ||  ||| ||||||||||| |||
seq2  CTTCAG--AAAGTATGG-CAGTCCCT-AATCCAC-GACTATTCCTTAAGA  1090

seq1  GACTATTTCTTCCAGAGAGATTGGAGAATGTCTCTACTTAACCCCACAAG  1148
      ||||| ||||  |||| ||||  ||| |||||||||||  ||||||||||
seq2  GACTA-TTCT--CAGAAAGAT--GAG-ATGTCTCTACT--ACCCCACAAG  1132

seq1  AGCAAGTAAAAGACTCTGATAGAGAGCATAG  1179
      ||| |||  |||||||||||||||  |||||
seq2  AGC-AGT--AAGACTCTGATAGAG-CCATAG  1159