BAC Information

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BAC

Clone NameB6Ng01-272N14
Chromosome4 (Build37)
Map Location 16,796,330 - 16,797,495
singlet/doubletsinglet
Overlap genenone
Upstream geneCalb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173, Mmp16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272N14.bB6Ng01-272N14.g
ACCGA074571GA074572
length1,1571,172
definitionB6Ng01-272N14.b B6Ng01-272N14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatttaagaaattatttggaaaaaagacctgaagacacttcac
ttgaagttcaaaaagtgagaaaagcaacagaaaagtaggggtaacaggga
tgtaagtgaaatagctactaaggtaggccaataaagcctgattctagcag
aggactatagaaacaagtttgtggtactttatacgacctttgagaatgaa
attccctatcatttctaatccatactctatatagataatccaatgaaaaa
taatttccatcatgttgatgtcattgtactgacattggaaattgtagatg
atttctctcttagatcagatttattacatttaccattgtgctttttatac
tgtttcttgtatctttcttctttctgtgtcaatttcattctacaagaaag
atgtcttcacataagttgcaccctatgtcttgtcaattttctcctcttaa
cctgacctgtttttattactttcattcctatatataagatatgtaatttt
gatctacttctgttctcatttctaaattgtttgctgctattttttcagac
ctagaaaattcttggcactgaccaaacctggaaggtgaaaaagcaatgga
tgtgagaagcaatcttgatagtctaaatgtaatagctttttaaaataatt
ttttactttaatttggtttatatggatggatgatctaaataaagatatca
tataagcaacattgatgtaaaattatgtactttggtatatattaccaatg
taagagaacaaatcaacataacagattttcaagtgtgcttaccttttctt
tgtgatttattaattaaataaaacatttctttaaaggaaataaatacttt
tattgaaataatactgtggttgaaatttataaaaatactgcatcagatct
tatttcataacatgtctagtggtaaacttaataaaatagaacttgctgtt
tatttcctttcctaaagtataagttgtttgcaaaattttcacagatatta
gaaactaaatgaaataacaagctagtgagaaggatgagtataaattctag
acatggtcactgactggtacatgcattcattttatcttttatcttttgat
tactataggatttctagaatattctttggatattttaatggatgacagtt
gacattc
gaattccaatgatcctgtctggatcgatcagtggtctatgcctcaagaga
aagttcagagagccttacagttggtgcaggaacaattgagactgtcacat
cttgagccttctacctcccgtggaaaacaccgatatttgtcataaaaaag
aaaagtggagcctggaggctgttacaggaccttcgagctgtaaataagac
catgatgctgatgggggcactacaaccaggcttaccatttcctatcgaaa
ttcccagaggttattctaaaattgtcatggatattaaagattgcttcttt
tctatcccacttcatcctcgagattatgttcgttttgccttttccattcc
cattgtaaatcacgtgggaccaagtccccattttcaatggcgggctttac
cccagggaatggctaatagccctacctcatgccagaaatatgtggcaccg
attattaatcctttgagacaagaattccctgatgcctatatattataata
tatggatgactgctcattgccacaaaagaattatcctccacccatgtgtt
tgcccaggccgtggttagggccctccaaaggtggggatttgtcatacctc
ctgataaaattaaagttcagtacctttttatgtttttaggttttcaatta
gaacccattagagtacattcccagaaattaactatcctcacctcaaagct
gaggaccttaaatgatttccaaaagttgctaggagatataaattggttac
gtccctatttaaaattaactaccggagatctaaagcccctttttgatgta
ctctggggagattctgacccaacctccccgcaaaatttatctcctgctgc
cctagaggctctccattgggtagagtcagccattaatcaacaaccatggg
ctattataacccccttaaacctctgtcttgatagtcttttccacaccctt
tgcacccactggccttttatggcagatgatatcccatttttctggatcat
tgcagcacatcttctcttatatgtcaggtgatatctagatcaaaatgcta
ccgtcatttggaaagctctgatactgttatttactatcctcctggagcag
ccttctctggttacgtccaatggataaggtgaactcatattatatatccc
ttcctttataggggaagactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16796330_16797495
seq2: B6Ng01-272N14.b_47_1203

seq1  GAATTCACATTTAAGAAATTATTTGGAAAAAAGACCTGAAGACACTTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTTAAGAAATTATTTGGAAAAAAGACCTGAAGACACTTCAC  50

seq1  TTGAAGTTCAAAAAGTGAGAAAAGCAACAGAAAAGTAGGGGTAACAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTTCAAAAAGTGAGAAAAGCAACAGAAAAGTAGGGGTAACAGGGA  100

seq1  TGTAAGTGAAATAGCTACTAAGGTAGGCCAATAAAGCCTGATTCTAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTGAAATAGCTACTAAGGTAGGCCAATAAAGCCTGATTCTAGCAG  150

seq1  AGGACTATAGAAACAAGTTTGTGGTACTTTATACGACCTTTGAGAATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTATAGAAACAAGTTTGTGGTACTTTATACGACCTTTGAGAATGAA  200

seq1  ATTCCCTATCATTTCTAATCCATACTCTATATAGATAATCCAATGAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTATCATTTCTAATCCATACTCTATATAGATAATCCAATGAAAAA  250

seq1  TAATTTCCATCATGTTGATGTCATTGTACTGACATTGGAAATTGTAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCCATCATGTTGATGTCATTGTACTGACATTGGAAATTGTAGATG  300

seq1  ATTTCTCTCTTAGATCAGATTTATTACATTTACCATTGTGCTTTTTATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTCTTAGATCAGATTTATTACATTTACCATTGTGCTTTTTATAC  350

seq1  TGTTTCTTGTATCTTTCTTCTTTCTGTGTCAATTTCATTCTACAAGAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTGTATCTTTCTTCTTTCTGTGTCAATTTCATTCTACAAGAAAG  400

seq1  ATGTCTTCACATAAGTTGCACCCTATGTCTTGTCAATTTTCTCCTCTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCACATAAGTTGCACCCTATGTCTTGTCAATTTTCTCCTCTTAA  450

seq1  CCTGACCTGTTTTTATTACTTTCATTCCTATATATAAGATATGTAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCTGTTTTTATTACTTTCATTCCTATATATAAGATATGTAATTTT  500

seq1  GATCTACTTCTGTTCTCATTTCTAAATTGTTTGCTGCTATTTTTTCAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTACTTCTGTTCTCATTTCTAAATTGTTTGCTGCTATTTTTTCAGAC  550

seq1  CTAGAAAATTCTTGGCACTGACCAAACCTGGAAGGTGAAAAAGCAATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAATTCTTGGCACTGACCAAACCTGGAAGGTGAAAAAGCAATGGA  600

seq1  TGTGAGAAGCAATCTTGATAGTCTAAATGTAATAGCTTTTTAAAATAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAAGCAATCTTGATAGTCTAAATGTAATAGCTTTTTAAAATAATT  650

seq1  TTTTACTTTAATTTGGTTTATATGGATGGATGATCTAAATAAAGATATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTTAATTTGGTTTATATGGATGGATGATCTAAATAAAGATATCA  700

seq1  TATAAGCAACATTGATGTAAAATTATGTACTTTGGTATATATTACCAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCAACATTGATGTAAAATTATGTACTTTGGTATATATTACCAATG  750

seq1  TAAGAGAACAAATCAACATAACAGATTTTCAAGTGTGCTTACCTTTTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGAACAAATCAACATAACAGATTTTCAAGTGTGCTTACCTTTTCTT  800

seq1  TGTGATTTATTAATTAAATAAAACATTTCTTTAAAAGGAAATAAATACTT  850
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTGATTTATTAATTAAATAAAACATTTCTTT-AAAGGAAATAAATACTT  849

seq1  TTATTGAAATAATACTGTGGTTGAAATTTATAAAAATACTGCATCAGATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAAATAATACTGTGGTTGAAATTTATAAAAATACTGCATCAGATC  899

seq1  TTATTTCATAACATGTCTAGTGGTAAACTTAATAAAATAGAACTTGCTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCATAACATGTCTAGTGGTAAACTTAATAAAATAGAACTTGCTGT  949

seq1  TTATTTCCTTTCCTAAAGTATAAGTTGTTTGCAAAATTTTCACAAGATAT  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTATTTCCTTTCCTAAAGTATAAGTTGTTTGCAAAATTTTCAC-AGATAT  998

seq1  TAGAAACTAAATGAAATAACAAGCTAGTGAGAAGGATGAAGTATAAATTC  1050
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAGAAACTAAATGAAATAACAAGCTAGTGAGAAGGATG-AGTATAAATTC  1047

seq1  TAAGACCATGGTCACTGGACTGGGTACCATGCAATTCCATTTATC-TTTA  1099
      | ||| |||||||||| |||| |||| ||||| ||||  |||||| ||||
seq2  T-AGA-CATGGTCACT-GACT-GGTA-CATGC-ATTCATTTTATCTTTTA  1091

seq1  TCTTTTGGTTTACTATAGGATTTCTAGAATAATTTCTTT-GATATTTTAA  1148
      |||||| | ||||||||||||||||||||||  |||||| ||||||||||
seq2  TCTTTT-GATTACTATAGGATTTCTAGAATA--TTCTTTGGATATTTTAA  1138

seq1  T-GATGACAGTTGACATTC  1166
      | |||||||||||||||||
seq2  TGGATGACAGTTGACATTC  1157