BAC Information

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BAC

Clone NameB6Ng01-273B15
Chromosome4 (Build37)
Map Location 19,107,940 - 19,108,230
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667251, LOC435772
Downstream geneCngb3, LOC623122, Cpne3, LOC100040306, 2410005O16Rik, Wwp1, Slc7a13, Atp6v0d2, LOC667282, Ttpa, LOC667301, EG664800
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273B15.bB6Ng01-273B15.g
ACCGA074757GA074758
length1,0221,182
definitionB6Ng01-273B15.b B6Ng01-273B15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctagttgttttaagttaggatctttttgcattttgtattttctt
tgattgttctgtccatgttctctatggaatcttctgcacctgagattctc
tcttccatctcttgtattctgttggtgatgcttgcatctatggttcctga
tttctttcctagggtttctatctccagagttgtctccctttgggttttct
ttcaattgtttctacttccatttttagaacctggacagttttgttcaatt
ctatcacctgtttggtagtgttttcctgtaactctctaagggatttttgt
gtttcctctttaaaggcttctagctgtttacctgtgttttcctgtattta
ctttttaaagtcctccatcatcatcatgagaaatgaatttagatccatgt
cttgtttttctggtgtgatggtttatccaggacttgctatggcgggagag
tttggttctgatgatgccaagtaactggtttctgttgcttatgttctcat
gcttgcctcctgccatctgattatctcaagtgcttgcttccctcaataca
tctgattggagcctgtccttcctatagacccagtttattcaggactcctc
agagtccagctttctctgtgatcctttgcttgtgagctcttgtgaacttg
agattctgggtgtgtcagagtttttggcagtcaagcttcctctgagaccc
tgaaatactggtgtgacctagctcctgttatcctgggatcctgttgtcct
aagatcctgggcgtgttacagtgcctgaaaatggtgtctcctttgaggac
cataaagctgtccagtcagagatcctaagatccctcggagagtcctctgg
ggaccatgggggtgtccgccgactctgggccctaggtgacctggtgctgg
caccgaccagaagggacttgtgtcctggtcaggctggttttctgcttccc
ttctgctgtctcagtcccacgtgattggattggaacagatgttgtgttcc
actcaccagtgatcctaacatc

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
gaattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattgcacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggcctcc
caatggaggagctagagaaagtaccccaggagctaaagggatcttcaacc
ctatagtgacacattatgaactaaccagtacccctgagctcttgactcta
gctgcatattgttatcaaggatgctagtcgcaatcactgaaagagagtcc
catgaaccgcgaaccttctgtgtgcctagtaggtaacgtcaggcctaggg
gaattggtgcctacggcgtcatcctcacgcgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_19107940_19108230
seq2: B6Ng01-273B15.b_59_360 (reverse)

seq1  TTAAAGAGG---------AATCCCTTAAAGAATTACAGAAAAACACAACC  41
      |||||||||         ||||||||| ||| |||||| ||||||| |||
seq2  TTAAAGAGGAAACACAAAAATCCCTTAGAGAGTTACAGGAAAACACTACC  50

seq1  AAACAGATGATGGAATTGAACAAAACCATCCAAGATCTAAAAATGGAAGT  91
      |||||| |||| ||||||||||||||  |||| | |||||||||||||||
seq2  AAACAGGTGATAGAATTGAACAAAACTGTCCAGGTTCTAAAAATGGAAGT  100

seq1  AAAAACAAT--GAAGAAAAACCAAAGGGAGGCAACTCTGAAGATAGAAAC  139
      | |||||||   ||||||| |||||||||| |||||||| ||||||||||
seq2  AGAAACAATTGAAAGAAAACCCAAAGGGAGACAACTCTGGAGATAGAAAC  150

seq1  CCTAGGAAAAAAATCAGGAACCATAGATGTGAGCATCAGCTACAGAATAG  189
      ||||||||| |||||||||||||||||||  ||||||| | |||||||| 
seq2  CCTAGGAAAGAAATCAGGAACCATAGATGCAAGCATCACCAACAGAATAC  200

seq1  AAGACATGGAAGAGAGAATCTCAGGTGCAAAAGATTCCATAGAGAACATG  239
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAGAGATGGAAGAGAGAATCTCAGGTGCAGAAGATTCCATAGAGAACATG  250

seq1  GACAAAACAATCAAAGAAAATGCAAAATGCAAAAAGATCCTAACTCAAAA  289
      |||| |||||||||||||||| ||||||||||||||||||||||| ||||
seq2  GACAGAACAATCAAAGAAAATACAAAATGCAAAAAGATCCTAACTTAAAA  300

seq1  CA  291
      ||
seq2  CA  302


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