BAC Information

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BAC

Clone NameB6Ng01-274G18
Chromosome4 (Build37)
Map Location 30,940,907 - 30,941,977
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665185, LOC619906, LOC100040864
Downstream geneLOC100040891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274G18.bB6Ng01-274G18.g
ACCGA075728GA075729
length1,1781,059
definitionB6Ng01-274G18.b B6Ng01-274G18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttctaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
aggttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcac
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatattttatattat
ttgtgactattgagaaggtgttgtttccctatttctttctcagcctgttt
attcttgtgtagagaaagcattgactgttgagttaattttatatcagcta
ctcacgagctgtttatcagtttaagagttctctgttgattttaggtcact
atatatacctatccatatcactctgcaagtgaatttggaactcttccatt
cgctgtataccctggattcctccccttt

gaattcacagctgagtaagactattgatgtgaagtgtctaagttattgct
tctatccccaccaagtagtgctgctcacaactttggtcagagaagcttct
ttttgcagtgagcaaatgaccacaaggaactcatagctcctcagagtact
aaaaaatgtgactgatgaattgttagacataatgaaacatatatgtcatt
caaactaggttcagagaattgtgtagaagaaactgtagaaagaatataac
aagaggaagagaggctggactactgagggatattgtcttcttgacataat
gtggcagttgtgtttcttttgatgtgatgtgactttgctcttgaaatcac
agcagctatgatttctacacagacctgcagaatcctgcgatcatccacat
catgtcaagtacttagcagagtctcatgagaccagaatctaccctgaaga
tctatgcatagttaatgggaaaggaagagacattattccaaagttaaacc
ggaggtcccacgtctattctttagtaaataacctttcttccaagatcatt
taagtgagtgttatgaaagaaaaaaagggggggggggggcaacagcaata
gcacaaagacatgaaagttgaatcaatgagaacaggcaggagataagagg
ccttaaaaagaaggcaagtagagatgactcagcattaaagagcttttgta
ggcaaccagggttttggatcccagcacgtatttaacaagcggtatgtata
gcacccacttacaaccctgtcttgaggaagacagagaaagaaagatcact
ggagtttttctagtttctagtatagtcaagaaagtttaggaagagactgt
gactcaaaagaataggtagaaagcgaaagaggagattatctgaaatatat
atatataaattggtaataaagatatttacatacatggatgcaaaaaaact
acacaaataaataatcagtaaaaagataagtttcttaaaaacagcaagat
aatcatctttgaatattgttatcaacaagtaaaccataaatactatttct
aacattaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30940907_30941977
seq2: B6Ng01-274G18.g_63_1121 (reverse)

seq1  TTTAATGGTTTTAGAAAATAGTATTTTATGTTTAACTTGTTGATAACCAA  50
      |||||||   |||| |||||||| |||||| || |||||||||||| |||
seq2  TTTAATG---TTAG-AAATAGTA-TTTATGGTTTACTTGTTGATAA-CAA  44

seq1  TATCAAAAGATGATTAATCTTGGCTGTTTTTAAGGAAAACTTTATTCTTT  100
      |||  |||||||||| ||||| ||||||||||||  ||||||   |||||
seq2  TATTCAAAGATGATT-ATCTT-GCTGTTTTTAAG--AAACTT--ATCTTT  88

seq1  TTACTGATTTATTTATTTGTTGGTTGGTTTTTTTGCATCCATGTATGTAA  150
      ||||||| ||||||||||||    | ||||||||||||||||||||||||
seq2  TTACTGA-TTATTTATTTGT---GTAGTTTTTTTGCATCCATGTATGTAA  134

seq1  ATATCTTTA-TACCAATTTATATATATATATTTCAGATAATCTCCTCTTT  199
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTTATTACCAATTTATATATATATATTTCAGATAATCTCCTCTTT  184

seq1  CGCTTTCTACCTATTCTTTTGAGTCACAGTCTCTTCCTAAACTTTCTTGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTCTACCTATTCTTTTGAGTCACAGTCTCTTCCTAAACTTTCTTGA  234

seq1  CTATACTAGAAACTAG-AAAACTCCAGTGATCTTTCTTTCTCTGTCTTCC  298
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTATACTAGAAACTAGAAAAACTCCAGTGATCTTTCTTTCTCTGTCTTCC  284

seq1  TCAAGACAGGGTTGTAAGTGGGTGCTATACATACCGCTTGTTAAATACGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACAGGGTTGTAAGTGGGTGCTATACATACCGCTTGTTAAATACGT  334

seq1  GCTGGGATCCAAAACCCTGGTTGCCTACAAAAGCTCTTTAATGCTGAGTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATCCAAAACCCTGGTTGCCTACAAAAGCTCTTTAATGCTGAGTC  384

seq1  ATCTCTACTTGCCTTCTTTTTAAGGCCTCTTATCTCCTGCCTGTTCTCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTACTTGCCTTCTTTTTAAGGCCTCTTATCTCCTGCCTGTTCTCAT  434

seq1  TGATTCAACTTTCATGTCTTTGTGCTATTGCTGTTG--CCCCCCCCCCCT  496
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  TGATTCAACTTTCATGTCTTTGTGCTATTGCTGTTGCCCCCCCCCCCCCT  484

seq1  TTTTTTCTTTCATAACACTCACTTAAATGATCTTGGAAGAAAGGTTATTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTCATAACACTCACTTAAATGATCTTGGAAGAAAGGTTATTT  534

seq1  ACTAAAGAATAGACGTGGGACCTCCGGTTTAACTTTGGAATAATGTCTCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAGAATAGACGTGGGACCTCCGGTTTAACTTTGGAATAATGTCTCT  584

seq1  TCCTTTCCCATTAACTATGCATAGATCTTCAGGGTAGATTCTGGTCTCAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCCATTAACTATGCATAGATCTTCAGGGTAGATTCTGGTCTCAT  634

seq1  GAGACTCTGCTAAGTACTTGACATGATGTGGATGATCGCAGGATTCTGCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCTGCTAAGTACTTGACATGATGTGGATGATCGCAGGATTCTGCA  684

seq1  GGTCTGTGTAGAAATCATAGCTGCTGTGATTTCAAGAGCAAAGTCACATC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTGTAGAAATCATAGCTGCTGTGATTTCAAGAGCAAAGTCACATC  734

seq1  ACATCAAAAGAAACACAACTGCCACATTATGTCAAGAAGACAATATCCCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAAAGAAACACAACTGCCACATTATGTCAAGAAGACAATATCCCT  784

seq1  CAGTAGTCCAGCCTCTCTTCCTCTTGTTATATTCTTTCTACAGTTTCTTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTCCAGCCTCTCTTCCTCTTGTTATATTCTTTCTACAGTTTCTTC  834

seq1  TACACAATTCTCTGAACCTAGTTTGAATGACATATATGTTTCATTATGTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAATTCTCTGAACCTAGTTTGAATGACATATATGTTTCATTATGTC  884

seq1  TAACAATTCATCAGTCACATTTTTTAGTACTCTGAGGAGCTATGAGTTCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATTCATCAGTCACATTTTTTAGTACTCTGAGGAGCTATGAGTTCC  934

seq1  TTGTGGTCATTTGCTCACTGCAAAAAGAAGCTTCTCTGACCAAAGTTGTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTCATTTGCTCACTGCAAAAAGAAGCTTCTCTGACCAAAGTTGTG  984

seq1  AGCAGCACTACTTGGTGGGGATAGAAGCAATAACTTAGACACTTCACATC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCACTACTTGGTGGGGATAGAAGCAATAACTTAGACACTTCACATC  1034

seq1  AATAGTCTTACTCAGCTGTGAATTC  1071
      |||||||||||||||||||||||||
seq2  AATAGTCTTACTCAGCTGTGAATTC  1059


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