BAC Information

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BAC

Clone NameB6Ng01-274I01
Chromosome4 (Build37)
Map Location 9,856,691 - 9,857,786
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666782, LOC100039584, 4933402J24Rik, Asph, Gdf6, 4930448K20Rik
Downstream geneLOC666840, 1700123O12Rik, LOC383991, LOC100039656, LOC545589, 2610301B20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274I01.bB6Ng01-274I01.g
ACCGA075788GA075789
length1,1151,133
definitionB6Ng01-274I01.b B6Ng01-274I01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccggccatggtgtgaacttactactgttatttagctaaatcag
tggttctcaacctgtgggtacaaccctttcaggggggtcgcctaagacca
tgggaaaacacagatatttacattgtgattcgtatcggtagcaaaattac
agttatgaagtagcaatgcaaataattttatggctgggggtcattacaac
atgaggagctatattaaagggtcacagcattaggatggttgagaaccact
gagctaaattgccatggtgccaagctgtcctttaaatatgtttctataaa
taggtaactgggactgtcaaagaagcttctccttgtggagaaatatgtca
gctcaaggttctgagaataaatgacagttgagtgtttagccctaaacaag
gctcagggatcaccttcaaaggagcagaaagaatgtaagagtcagaacac
agtgagaatagctatgaaatgtctttggggcatggcacagccagagcagt
cacaagcccacagcagctgtggtctatcagctgttaatcaccaaccaaga
aggagcttatgtgacctgaccacttcctgctttacttactattggctccg
gatagactctggggcggagcattcatggcctcagttttgtatcaccgagg
aaccctcctggttccaatgaatatttccaaatccacggtcgcacagatga
ttctggttaaactcagttagtttcagcgacaaacaaaactctttctaagt
tgtgaatttggtaaagcgacgtgtagctgggaaatgggagagaggttata
cagggtggtgttacaataatcagaatgtgttttgtaacatctatgaagct
gtcaaagtacaaactcaaaacttgtttgtttaattttcaacccggatgtg
tcctagcccttagtcacacttataggagatatatagaacacaggaatatg
ctgagtattaccacagggtacaatcactaatctctcctatggtaaccctc
atttgttcaacacctgcatacaaagaacgcgattttaagtgaatccacta
gagcagagatgaacctattcctaggctcatgaattggctccatgggggtt
tcagatttcaggtgc
gaattccaaaacacattgtggccatccagttaaagtaggacccgtagagg
tcagatgactatcagcattctggctgaagtctaactcagaggaggtccag
tatgtccctgaactcatcctttgcttatttttccagtcctagaatgtata
actgatgtagatatacttagaaattggcagaattctcacactgggttcct
gacctgtggagtgagggccattatgattggaaaagctaaatgggagcctt
tagagttgtctctgccaaggcaagtcatgaatcaaaaacagtatcacatc
ctgggggaactgcaggaattagccccaccatcagggacgtgagaatgcag
ggatggtttgttcttaccacatctcctactggacagtgcagaagacaggt
gggctgtggaaactgacagacaattgactattgaaaatttggtcaggtag
tgactctgattgcagctgttctaccacacatggcatccttacttgagaga
ttatcttatctcttagtctaacaaatgctgtttcctctacaactgtccat
taggaccacaagaaacaatttgctttcagttggcagtgcagccctatact
tttaaagtttttcttcaaggagatattaactttctagcctatgccatggc
ttagttagaaggaatctcaatcatctcttccataaaatatcacattgatg
tactatattgatgacagtatactgattggaccaagtgagcaggaggtagc
aaccacttttgactcattggtaacacatataagcatcagagaatggaaaa
taaatctaatcaaaattcaagggccttctgcctcagtgaaattcttagga
gtacagttattgcacccgaccccttccactaccaagggaagaaagacaat
atttagtggcgtattaagttaaaatatttttgctacttgtttcctatgat
attaagttctgctggcatagagttttgaaccatagtgggggaggtgctct
tcaggagccacagcaaggcatttccattggaactggatgcctcagacttt
cccctgctctcactttgggttctaatgctctaggccaatgtctcatgggg
agaaattaccattgtaaggtgtgctggaattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_9856691_9857786
seq2: B6Ng01-274I01.b_68_1158 (reverse)

seq1  GCACCTTGGAATCTGAA--CCCCAT-GAGCCATTTCATGAACCCTAGATT  47
      ||||| || ||||||||  |||||| |||||| ||||||| ||   || |
seq2  GCACC-TGAAATCTGAAACCCCCATGGAGCCAATTCATGAGCCTAGGAAT  49

seq1  AGGTTCATCTCTTGCTCTTAGTTGATTCACTTTAAAATCGCGTTCTTTTG  97
      ||||||||||| ||||| |||| ||||||| |||||||||||||| ||||
seq2  AGGTTCATCTC-TGCTC-TAGTGGATTCAC-TTAAAATCGCGTTC-TTTG  95

seq1  TATGCA-GTGTTGAACAAATGAGGGTTTACCATAGGAGAAGATTTAGTGA  146
      |||||| |||||||||||||||||| |||||||||||| ||| |||||||
seq2  TATGCAGGTGTTGAACAAATGAGGG-TTACCATAGGAG-AGA-TTAGTGA  142

seq1  TTGTACCCTTGTGGT-ATACTTCAGCATATTCCTGTGTTCTATATATCTC  195
      |||||||| |||||| |||| |||||||||||||||||||||||||||||
seq2  TTGTACCC-TGTGGTAATAC-TCAGCATATTCCTGTGTTCTATATATCTC  190

seq1  CTATAAGTGTGACCTAAGGCTAGGACACATCCGGGTTGAAAATTAAACAA  245
      |||||||||||||  | |||||||||||||||||||||||||||||||||
seq2  CTATAAGTGTGACTAAGGGCTAGGACACATCCGGGTTGAAAATTAAACAA  240

seq1  ACAAGTTTTGAGTTTGTACTTTGACAGCTTCATAGATGTTACAAAACACA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTTTGAGTTTGTACTTTGACAGCTTCATAGATGTTACAAAACACA  290

seq1  TTCTGATTATTGTAACACCACCCTGTATAACCTCTCTCCCATTTCCCAGC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTATTGTAACACCACCCTGTATAACCTCTCTCCCATTTCCCAGC  340

seq1  TACACGTCGCTTTACCAAATTCACAACTTAGAAAGAGTTTTGTTTGTCGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGTCGCTTTACCAAATTCACAACTTAGAAAGAGTTTTGTTTGTCGC  390

seq1  TGAAACTAACTGAGTTTAACCAGAATCATCTGTGCGACCGTGGATTTGGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTAACTGAGTTTAACCAGAATCATCTGTGCGACCGTGGATTTGGA  440

seq1  AATATTCATTGGAACCAGGAGGGTTCCTCGGTGATACAAAACTGAGGCCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCATTGGAACCAGGAGGGTTCCTCGGTGATACAAAACTGAGGCCA  490

seq1  TGAATGCTCCGCCCCAGAGTCTATCCGGAGCCAATAGTAAGTAAAGCAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCTCCGCCCCAGAGTCTATCCGGAGCCAATAGTAAGTAAAGCAGG  540

seq1  AAGTGGTCAGGTCACATAAGCTCCTTCTTGGTTGGTGATTAACAGCTGAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTCAGGTCACATAAGCTCCTTCTTGGTTGGTGATTAACAGCTGAT  590

seq1  AGACCACAGCTGCTGTGGGCTTGTGACTGCTCTGGCTGTGCCATGCCCCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACAGCTGCTGTGGGCTTGTGACTGCTCTGGCTGTGCCATGCCCCA  640

seq1  AAGACATTTCATAGCTATTCTCACTGTGTTCTGACTCTTACATTCTTTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTTCATAGCTATTCTCACTGTGTTCTGACTCTTACATTCTTTCT  690

seq1  GCTCCTTTGAAGGTGATCCCTGAGCCTTGTTTAGGGCTAAACACTCAACT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTTGAAGGTGATCCCTGAGCCTTGTTTAGGGCTAAACACTCAACT  740

seq1  GTCATTTATTCTCAGAACCTTGAGCTGACATATTTCTCCACAAGGAGAAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTATTCTCAGAACCTTGAGCTGACATATTTCTCCACAAGGAGAAG  790

seq1  CTTCTTTGACAGTCCCAGTTACCTATTTATAGAAACATATTTAAAGGACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGACAGTCCCAGTTACCTATTTATAGAAACATATTTAAAGGACA  840

seq1  GCTTGGCACCATGGCAATTTAGCTCAGTGGTTCTCAACCATCCTAATGCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGCACCATGGCAATTTAGCTCAGTGGTTCTCAACCATCCTAATGCT  890

seq1  GTGACCCTTTAATATAGCTCCTCATGTTGTAATGACCCCCAGCCATAAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCTTTAATATAGCTCCTCATGTTGTAATGACCCCCAGCCATAAAA  940

seq1  TTATTTGCATTGCTACTTCATAACTGTAATTTTGCTACCGATACGAATCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGCATTGCTACTTCATAACTGTAATTTTGCTACCGATACGAATCA  990

seq1  CAATGTAAATATCTGTGTTTTCCCATGGTCTTAGGCGACCCCCCTGAAAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTAAATATCTGTGTTTTCCCATGGTCTTAGGCGACCCCCCTGAAAG  1040

seq1  GGTTGTACCCACAGGTTGAGAACCACTGATTTAGCTAAATAACAGTAGTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACCCACAGGTTGAGAACCACTGATTTAGCTAAATAACAGTAGTA  1090

seq1  A  1096
      |
seq2  A  1091