BAC Information

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BAC

Clone NameB6Ng01-274L04
Chromosome4 (Build37)
Map Location 16,512,788 - 16,656,154
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274L04.bB6Ng01-274L04.g
ACCGA075934GA075935
length551828
definitionB6Ng01-274L04.b B6Ng01-274L04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,512,788 - 16,513,344)(16,655,337 - 16,656,154)
sequence
tcaaaaaaaaaaaaaaaaaaaagaaagaaagaaagaaagacaagagagac
acagatagagacacataggagagaacataattttgtctgtcagggactta
atttaaaattaaccttcagaataattgtttttttcagaaaatttaaaaat
atatataaaatcaaattgtacatgtaggttgacataatcatctctttggg
gactgcagcaggtactaaggaggaggaggaagaggagtagaaagaggagg
aagaatagtagtgatgttcagagtagaatgttaaatggatatttttctac
tgtgaaaacatgaataaaataaacctattacctcagataggtcactgagg
acagaccaagtaatgatttcacctaagaccagtttggtgaacccatgagt
ttattgttacagaataaccactacaaggcttcaatactttatgtagattg
gcctcgtggaagctttagcatggagtcctacttttagctaactttcctct
ttctgtatactatagtatctcctaagataattttcagctgctgggacagg
c
gaattcaaattaaagtaacaaggaactaaccagacccccccagagctccc
agggactaaaccatcaaccaaagagcacacatggtgggactcatagctcc
agctgaatatgtagtagagcatggcctaataggtcatcaatgggaagaga
ggcccttggtcctgtaaaggcctgatgccccagtgtaggggaatgccagg
gccaggaagcaggagtgggtgtgtttttaagcagagggcttaaaggtgga
ggggctagggggttttcagaggggaaaccaggaaagagaataacatttga
aatgtaaataaaggatatatctaattaaaaaaataacaagcaacaccaaa
agctcacaaaatgattaaagtgttaaaaataataaaataaagcattgtta
ctaacaaccataaagaacttaacagctgtgatccatgagaatccaagaga
tagacaaataaagataaaaatcaatatgtttaaaattctaatatgtttaa
attataaatattgaaatatgtaataatcatattaaactatcaactgaatt
taatattttatttttttttcaaattatatttctgtagtcatctcgcctct
ggagcttactcctacttcaaaggttttatgtgtattcagtacttcaagct
cccctttgtattaagtcatttcagtaatggaaagtcacctgaacagttca
gctttactatctattaatactagtattaatcacttatacaaacagttaag
aataattaattttatcaacagcgatggggtgatttggggcttaccatatt
gaaagttggggttccatgagttccttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16512788_16513344
seq2: B6Ng01-274L04.b_41_597

seq1  GAATTCTCAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGACAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGACAAG  50

seq1  AGAGACACAGATAGAGACACATAGGAGAGAACATAATTTTGTCTGTCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACAGATAGAGACACATAGGAGAGAACATAATTTTGTCTGTCAGG  100

seq1  GACTTAATTTAAAATTAACCTTCAGAATAATTGTTTTTTTCAGAAAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAATTTAAAATTAACCTTCAGAATAATTGTTTTTTTCAGAAAATTT  150

seq1  AAAAATATATATAAAATCAAATTGTACATGTAGGTTGACATAATCATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATATATAAAATCAAATTGTACATGTAGGTTGACATAATCATCTC  200

seq1  TTTGGGGACTGCAGCAGGTACTAAGGAGGAGGAGGAAGAGGAGTAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGACTGCAGCAGGTACTAAGGAGGAGGAGGAAGAGGAGTAGAAAG  250

seq1  AGGAGGAAGAATAGTAGTGATGTTCAGAGTAGAATGTTAAATGGATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAAGAATAGTAGTGATGTTCAGAGTAGAATGTTAAATGGATATTT  300

seq1  TTCTACTGTGAAAACATGAATAAAATAAACCTATTACCTCAGATAGGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTGTGAAAACATGAATAAAATAAACCTATTACCTCAGATAGGTCA  350

seq1  CTGAGGACAGACCAAGTAATGATTTCACCTAAGACCAGTTTGGTGAACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGACAGACCAAGTAATGATTTCACCTAAGACCAGTTTGGTGAACCC  400

seq1  ATGAGTTTATTGTTACAGAATAACCACTACAAGGCTTCAATACTTTATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTTATTGTTACAGAATAACCACTACAAGGCTTCAATACTTTATGT  450

seq1  AGATTGGCCTCGTGGAAGCTTTAGCATGGAGTCCTACTTTTAGCTAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGGCCTCGTGGAAGCTTTAGCATGGAGTCCTACTTTTAGCTAACTT  500

seq1  TCCTCTTTCTGTATACTATAGTATCTCCTAAGATAATTTTCAGCTGCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTCTGTATACTATAGTATCTCCTAAGATAATTTTCAGCTGCTGG  550

seq1  GACAGGC  557
      |||||||
seq2  GACAGGC  557

seq1: chr4_16655337_16656154
seq2: B6Ng01-274L04.g_64_891 (reverse)

seq1  CTAA-GAACTCAT-GAACCACAAC-TTCAATATGGTAAGCCCCAAATCA-  46
      |||| |||||||| ||||| |||| |||||||||||||||||||||||| 
seq2  CTAAGGAACTCATGGAACCCCAACTTTCAATATGGTAAGCCCCAAATCAC  50

seq1  CCCATCGCTGTT-AT-AAATTAATTA-TCTTAACTGTTTTGTTATAGTGA  93
      |||||||||||| || |||||||||| ||||||||| |||||   |||||
seq2  CCCATCGCTGTTGATAAAATTAATTATTCTTAACTG-TTTGTATAAGTGA  99

seq1  TTAATACTAGTATTAATAGATAGTAAAGCTGAACTGTTCAGGTGACTTT-  142
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTAATACTAGTATTAATAGATAGTAAAGCTGAACTGTTCAGGTGACTTTC  149

seq1  CATTACTG-AATGACTTAATACAAA-GGGAGCTTGAAGTACTGAATACAC  190
      |||||||| |||||||||||||||| ||||||||||||||||||||||||
seq2  CATTACTGAAATGACTTAATACAAAGGGGAGCTTGAAGTACTGAATACAC  199

seq1  ATAAAACCTTTGAAGTAGGAGTAAGCTCCAGAGGCGAGATGACTACAGAA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACCTTTGAAGTAGGAGTAAGCTCCAGAGGCGAGATGACTACAGAA  249

seq1  ATATAATTTG-AAAAAAAATAAAATATTAAATTCAGTTGATAGTTTAATA  289
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTTGAAAAAAAAATAAAATATTAAATTCAGTTGATAGTTTAATA  299

seq1  TGATTATTACATATTTCAATATTTATAATTTAAACATATTAGAATTTTAA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATTACATATTTCAATATTTATAATTTAAACATATTAGAATTTTAA  349

seq1  ACATATTGATTTTTATCTTTATTTGTCTATCTCTTGGATTCTCATGGATC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTGATTTTTATCTTTATTTGTCTATCTCTTGGATTCTCATGGATC  399

seq1  ACAGCTGTTAAGTTCTTTATGGTTGTTAGTAACAATGCTTTATTTTATTA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGTTAAGTTCTTTATGGTTGTTAGTAACAATGCTTTATTTTATTA  449

seq1  TTTTTAACACTTTAATCATTTTGTGAGCTTTTGGTGTTGCTTGTTATTTT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAACACTTTAATCATTTTGTGAGCTTTTGGTGTTGCTTGTTATTTT  499

seq1  TTTAATTAGATATATCCTTTATTTACATTTCAAATGTTATTCTCTTTCCT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAGATATATCCTTTATTTACATTTCAAATGTTATTCTCTTTCCT  549

seq1  GGTTTCCCCTCTGAAAACCCCCTAGCCCCTCCACCTTTAAGCCCTCTGCT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCCCTCTGAAAACCCCCTAGCCCCTCCACCTTTAAGCCCTCTGCT  599

seq1  TAAAAACACACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTACACTGG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACACACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTACACTGG  649

seq1  GGCATCAGGCCTTTACAGGACCAAGGGCCTCTCTTCCCATTGATGACCTA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAGGCCTTTACAGGACCAAGGGCCTCTCTTCCCATTGATGACCTA  699

seq1  TTAGGCCATGCTCTACTACATATTCAGCTGGAGCTATGAGTCCCACCATG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCCATGCTCTACTACATATTCAGCTGGAGCTATGAGTCCCACCATG  749

seq1  TGTGCTCTTTGGTTGATGGTTTAGTCCCTGGGAGCTCTGGGGGGGTCTGG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCTTTGGTTGATGGTTTAGTCCCTGGGAGCTCTGGGGGGGTCTGG  799

seq1  TTAGTTCCTTGTTACTTTAATTTGAATTC  818
      |||||||||||||||||||||||||||||
seq2  TTAGTTCCTTGTTACTTTAATTTGAATTC  828