BAC Information

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BAC

Clone NameB6Ng01-275M02
Chromosome4 (Build37)
Map Location 145,161,552 - 145,162,165
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666215, LOC435815, Gm436, LOC546849, Gm438, LOC666242, LOC676844, Dhrs3, Vps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846
Downstream geneLOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275M02.bB6Ng01-275M02.g
ACCGA076707GA076708
length1,1401,156
definitionB6Ng01-275M02.b B6Ng01-275M02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaatctgcaaaagcccgcagtgcccaggaactttttagcttgt
tttgcactggtcggtggaggagtatgaaacacagtctctttttttagctg
cttcaacaggtaggtcaccggactcttctaaggactcggcttctgtatta
gcaccccttttgttattttttaaacacattgatctttagccaaaagcttt
cttttgttgccaggtactatctaagttttttaattttcctgacttttgtg
gccagcattttatttctcttatctttttgtctcacagcacagctctgatt
ctgactttggtctctgtctttgtcttaacttcctgttaccttggtcagat
tgttgggactttctagtcccacagagacgagacccccatcagagcctggc
agttagactcacaggtgctccttaccttggacagaagccccaagtgggtg
gatgcctctctcactggagtttagaacagactcactgccagcaactcagg
gtggtgccaccttctgagatgagggaactttagagcagagacgggagtgc
agctctcacagctggctgcaaccagcacttatcttaaagtgaaagcagtt
tttctgttaacaagagacgggatgggagggacaggggaatgagaagctgc
ctgggaacctgcagcgctcttggccggctactcgaacagcctcctcttat
ttttttttttttttttcagcagccacaacatccaggccactgacttctca
gggaccactcctcttttgctccggatttccgagctcatttttccctaggc
tccaggtccatgggcgggaccactgtgacccgctggctgctctctggagt
tggagtgggaggcaaggcagctgaagatcttgaaaggaagtggtcagcat
agggatctgtcaagattcttaggcttatttcagaaggcaataacttaaaa
aacagtcgtcagtcatcagtccaagtccgaaccacaagagacacaaaaga
ccccccagaaaccgtttttcagcacactatagaatccacagtaccacaga
aatgacaaaacccaggcaaaacaatacagcaatctacaatgcgatttcag
agaagctactgtcacatatgaacaaccgatggactgtctc
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgttcaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctcgactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccactcccataat
cagcatccaaaacgctgacaccattgcatacactagcaagattttattga
aaggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaa
acacaagaagtggatgccttcacagtcagctaatggatggatcaataggg
ctcccaatggaaggagctagagtaaagtagccaggagctaaagggattct
gcaaccctatagtggaacaacattatggagctaaccagttacccagagct
tctgactcctagctgcattatatatcaaagaatgggcctagtccgccatt
cactgggaatggaagccaatttgacttgctaacttttatatgccctcaga
tacaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145161552_145162165
seq2: B6Ng01-275M02.b_567_1182

seq1  GAACTTTAGAGCAGAGACGGGAGTGCAGCTCTCACAGCTGGCTGCAACCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAACTTTAGAGCAGAGACGGGAGTGCAGCTCTCACAGCTGGCTGCAACCA  50

seq1  GCACTTATCTTAAAGTGAAAGCAGTTTTTCTGTTAACAAGAGACGGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTATCTTAAAGTGAAAGCAGTTTTTCTGTTAACAAGAGACGGGATG  100

seq1  GGAGGGACAGGGGAATGAGAAGCTGCCTGGGAACCTGCAGCGCTCTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGACAGGGGAATGAGAAGCTGCCTGGGAACCTGCAGCGCTCTTGGC  150

seq1  CGGCTACTCGAACAGCCTCCTC-------TTCTTTTTTTTTTCAGCAGTC  193
      ||||||||||||||||||||||       || |||||||||||||||| |
seq2  CGGCTACTCGAACAGCCTCCTCTTATTTTTTTTTTTTTTTTTCAGCAGCC  200

seq1  ACAACATCTAGGCCACTGACTTCTCAGGGACCACTCCTCATTTGCTCCGG  243
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  ACAACATCCAGGCCACTGACTTCTCAGGGACCACTCCTCTTTTGCTCCGG  250

seq1  ATTTCCGAGCTCATTTTTCCCTAGGCTCCAGGTCCATGGGCGGGACCACT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCGAGCTCATTTTTCCCTAGGCTCCAGGTCCATGGGCGGGACCACT  300

seq1  GTGACCCGCTGGCTGCTCTCTGGAGTTGGAGTGGGAGGCAGGGCAGCTGA  343
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTGACCCGCTGGCTGCTCTCTGGAGTTGGAGTGGGAGGCAAGGCAGCTGA  350

seq1  GGATC-TGAAAGGAAGTGGTCAGCATAGGGATCTGACAGGATTCTTAGGC  392
       |||| ||||||||||||||||||||||||||||| || |||||||||||
seq2  AGATCTTGAAAGGAAGTGGTCAGCATAGGGATCTGTCAAGATTCTTAGGC  400

seq1  TTATTTCAGAAGGC-ATAACTT-AAAAACAGTCGTCAGTCATCAGTCCAA  440
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  TTATTTCAGAAGGCAATAACTTAAAAAACAGTCGTCAGTCATCAGTCCAA  450

seq1  GTCCGAACACAAAGAGACACAAAAGACACACACAGAAACCGTTTTTCAGG  490
      ||||||||   |||||||||||||||| | | |||||||||||||||| |
seq2  GTCCGAACCACAAGAGACACAAAAGAC-CCCCCAGAAACCGTTTTTCA-G  498

seq1  CAACCACTATAGAAT-CACAGTACCACAGAAATGAC-AAACACAAGCAAG  538
      ||  ||||||||||| |||||||||||||||||||| |||| || |||| 
seq2  CA--CACTATAGAATCCACAGTACCACAGAAATGACAAAACCCAGGCAA-  545

seq1  ACCAATACAGGGCATCTTACATGCGATTTCCAGAGAAGCTTACTGTCAC-  587
      | ||||||| |  ||||   ||||||||| ||||||||| ||||||||| 
seq2  AACAATACA-GCAATCTACAATGCGATTT-CAGAGAAGC-TACTGTCACA  592

seq1  TATGACCAACTCAAATGGACCTGTCTC  614
      ||||| |||  |  ||||| |||||||
seq2  TATGAACAA--CCGATGGA-CTGTCTC  616