BAC Information

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BAC

Clone NameB6Ng01-276A10
Chromosome4 (Build37)
Map Location 147,095,704 - 147,096,832
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100
Downstream geneLOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276A10.bB6Ng01-276A10.g
ACCGA076907GA076908
length1,1301,163
definitionB6Ng01-276A10.b B6Ng01-276A10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaataggagacccaaaaatagacccacacacctacggacagtacg
caggccacacacacacacacaagtgcgggtagctgcagaggacaagagag
ggccttgtgctttgaagctagctctaagtgtcccgctccagtctttttct
tttttttttttaaactttgtaagtatttatcattgctcatcctgtgtgac
atttagagctatatcacagtttttgtgaggttgccaaggatatgttgtca
gtttatatacattcctgcatattaagaagtgatttagaggcttggggagg
cagctcagtaattaaaaacactctgctgcacttgtggagcagggttgaat
tcccaggactcacatggtggatcagaactgaaactccaattccaggaagt
acaatgtcctcttctgacctctgtgggcaccaggcatgtatgtgatggag
cacagatacacatgtaggcgaaaacacccttatacaaaaaaataatatgt
tttcaataaaataagaaaaatgtttaaaaggaaagtagtaactcaggctg
ggaatgtgctagcctggtaccacaaaccttgcattcagagctcagaccca
tgtcacatgttgagatggtacacgcttttagtcccctcagaatttgtgag
gtggaagccgaaggattaaagagtcaggcacatcctctgtgacatagtca
gtttgaggaagaccagcctgagctacatgagaccctctcttgaaacacaa
aggaagcaaagaatgactgtggtccaggattctggggtcactgcccccag
ctttgatttacaaaccaccagctgtgtacagtatgcagtgatcagaaccc
acctcacagctaatactgcatttgctccttagcatcaagaaaaaaggcca
ggcacttttcccaatgctttagaaataaaaagttgtatttaattctccac
cacttggaagcaaggatgctttttgccagccaacatttttaaagagaaga
actagggatctggaataagatgggcttggtgggtaagagcactgggctgc
tctttcagggaaccaaagtcgttctcaggtacccacaataagtggctcat
gacatcactatgactgcagtctaggactga
gaattcatacaggagagaaaccttacaaatgcagtgaatgtgacaaatcc
tttactaaaaaattcagtttgaggattcatcagagaattcatacaggaga
gaaaccttacaaatgcagtgaatgtgaaaaatgctttactttcaaaggca
gtctgaggattcatcagagaattcatacaggagagaaaccctacaaatgt
agtgaatgtgacaaatcctttactgaaaatggctgtttgagaattcatca
gagaattcatacaggagagaaaccttacaaatgcactgaatgtgacaaat
gctttactttcaaaggcagtctgaggattcatcagagaattcatacagga
gagaaaccttacaaatgcactgaatgtgacaaatcctttactgaaaaggg
caaactgagaattcatcagagaattcatacaggagagaaaccttacaaat
gtagtgaatgtgacaaatgctttactgaaaaaggccatcagagaattcat
acaggagagataccttacaaatagtttgtatgtgacaaatacaatacaat
gtcagtctgagaaatcatcagtttttaatacagtagagaatatttataaa
tgaagtgaatgagacaatcctttaccaagatatatcatcttaaaaatcat
tagagaatacttacagaagagaaacttttcaattatatcgaaggtatgaa
tcctttactcttggcctatttcctagaatgttaacagtgaatacttacag
gatacaaacttaactcatgcattgtatgaagaaatatctttgacttcatt
tcaggtcaaagagaatatctaataactttttaggggaaagtatttctgtt
ggggaaagtgtggcctgtgttttattcacgttctattcttgacaacaatt
gaggctccacactagagaattagtatgattatgaaaatcatgtgaaaact
ttcatgcaatgttcaaatcttaaataatgtcaactatttttttgcttgaa
gaaactctgaaaatgtaaaaatgtagaaagcttttcatgacaccttttta
cttgtcacccgtaatgtacagaatgagacagtggagtgaaggagatatta
tttgtgtacacatcattgagaaccgagtaatcccaattcaaaaggaaacc
taattttaaggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147095704_147096832
seq2: B6Ng01-276A10.b_46_1175

seq1  GAATTCAATAGGAGACCCAAAAATAGACCCACACACCTACGGACAGTACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGGAGACCCAAAAATAGACCCACACACCTACGGACAGTACG  50

seq1  CAGGCCACACACACACACACAAGTGAAGGTAGCTGCAGAGGACAGGAGAG  100
      |||||||||||||||||||||||||  ||||||||||||||||| |||||
seq2  CAGGCCACACACACACACACAAGTGCGGGTAGCTGCAGAGGACAAGAGAG  100

seq1  GGCCTTGTGCTTTGAAGCTAGCTCTAAGTGTCCTGCTTCAGTCTTTTTCT  150
      ||||||||||||||||||||||||||||||||| ||| ||||||||||| 
seq2  GGCCTTGTGCTTTGAAGCTAGCTCTAAGTGTCCCGCTCCAGTCTTTTTC-  149

seq1  TTTTTTTTTTTTTTAAACTTTGTAAGTATTTATCATTGCTCATCCTGTGT  200
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  --TTTTTTTTTTTTAAACTTTGTAAGTATTTATCATTGCTCATCCTGTGT  197

seq1  GACATTTAGAGCTATATCACAGTTTTAGTGAGGTTGCCAAGGATATGTTG  250
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GACATTTAGAGCTATATCACAGTTTTTGTGAGGTTGCCAAGGATATGTTG  247

seq1  CCAGTTTATATACATTCCTGCATATTAAGAAGTGATTTAGAGGCTTGGGG  300
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTATATACATTCCTGCATATTAAGAAGTGATTTAGAGGCTTGGGG  297

seq1  AGGCAGCTCGGTAATTAAAAACACTCTGCTGCACTTGTGGAGCAGGGTTG  350
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCTCAGTAATTAAAAACACTCTGCTGCACTTGTGGAGCAGGGTTG  347

seq1  AATTCCCAGGACTCACATGGTGGATCAGAACTGAAACTCCAATTCCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCAGGACTCACATGGTGGATCAGAACTGAAACTCCAATTCCAGGA  397

seq1  AGTACAATGTCCTCTTCTGACCTCTGTGGGCACCAGGCATGTATGTGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAATGTCCTCTTCTGACCTCTGTGGGCACCAGGCATGTATGTGATG  447

seq1  GGGCACAGATACACATGTAGGCGAAAACACCCTTATACAAAAAAATAATA  500
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACAGATACACATGTAGGCGAAAACACCCTTATACAAAAAAATAATA  497

seq1  TGTTTTCAATAAAATAAGAAAAATGTTTAAAAGGAAAGTAGTAACTCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCAATAAAATAAGAAAAATGTTTAAAAGGAAAGTAGTAACTCAGG  547

seq1  CTGGGAATGTGCTAGCCTGGTACCACAAACCTTGCATTCAGAGCTCAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAATGTGCTAGCCTGGTACCACAAACCTTGCATTCAGAGCTCAGAC  597

seq1  CCATGTCACATGTTGAGATGGTACACGCTTTTAGTCCCCTCAGAATTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCACATGTTGAGATGGTACACGCTTTTAGTCCCCTCAGAATTTGT  647

seq1  GAGGTGGAAGCCAAAGGATTAAAGAGTCAGGCACATTCTCTGTGACATAG  700
      |||||||||||| ||||||||||||||||||||||| |||||||||||||
seq2  GAGGTGGAAGCCGAAGGATTAAAGAGTCAGGCACATCCTCTGTGACATAG  697

seq1  TCAGTTTGAGGAAAACCAGCCTGAGCTACATGAGACCCTCTCTTGAAACA  750
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTGAGGAAGACCAGCCTGAGCTACATGAGACCCTCTCTTGAAACA  747

seq1  CAAAGGAGGCAAAGAATGACTGTGGTCCAGGATTCTGGGGTCACTGCCCC  800
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAAGCAAAGAATGACTGTGGTCCAGGATTCTGGGGTCACTGCCCC  797

seq1  CAGCTTTGATTTACAAACCACCAGCTGTGTACAGTATGCAGTGATCAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTGATTTACAAACCACCAGCTGTGTACAGTATGCAGTGATCAGAA  847

seq1  CCCACCTCACAGCTAATACTGCATTTGCTCCTGAGCATCAAGAAGAAAGG  900
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  CCCACCTCACAGCTAATACTGCATTTGCTCCTTAGCATCAAGAAAAAAGG  897

seq1  CCAGGCACTTTTCCAAATGCTTTAGAAATAAAAAGTTGTATTTAATTCTC  950
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCAGGCACTTTTCCCAATGCTTTAGAAATAAAAAGTTGTATTTAATTCTC  947

seq1  CACCACTT-GAAGCAAGGATGCTTTTTGCCAGCC-ACA-TTTTAAAGAGA  997
      |||||||| ||||||||||||||||||||||||| ||| |||||||||||
seq2  CACCACTTGGAAGCAAGGATGCTTTTTGCCAGCCAACATTTTTAAAGAGA  997

seq1  AGAACTA-GGATCTGGA--TAGAT-GGCTTGGTGATTAAGAGCACT-GGC  1042
      ||||||| |||||||||   |||| |||||||||  |||||||||| |||
seq2  AGAACTAGGGATCTGGAATAAGATGGGCTTGGTGGGTAAGAGCACTGGGC  1047

seq1  TGCTC-TTCAGGGAACCAAAGGTTGTTCTCAGGTACACACA--TAGTAGC  1089
      ||||| |||||||||||||| || |||||||||||| ||||   ||| ||
seq2  TGCTCTTTCAGGGAACCAAA-GTCGTTCTCAGGTACCCACAATAAGTGGC  1096

seq1  TCATGACCACCAACTATGACTGCAGTTCCTAGGGAACTGA  1129
      |||||||  |  ||||||||||||||  |||||  |||||
seq2  TCATGACATC--ACTATGACTGCAGT--CTAGG--ACTGA  1130