BAC Information

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BAC

Clone NameB6Ng01-276D19
Chromosome4 (Build37)
Map Location 73,657,587 - 73,658,746
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667713, LOC100039698, OTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik
Downstream geneFrmd3, LOC100039774, Jmjd2c, LOC100040258, LOC100039814
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276D19.bB6Ng01-276D19.g
ACCGA077068GA077069
length1,1791,232
definitionB6Ng01-276D19.b B6Ng01-276D19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgttgctctccaggaattcattgtcatcccaatgagcccctg
tccctgtgtgaaatgctctaggttcaaggggtgacggagatgttgcagca
gttacaggtaggtagaacttcgagatggagggagaaatgttagaaaatag
gaattaaatgaaagctgctttgctctgttgtttctttttcagtgaggaat
gattgctaccagaaaggcttgttagctgtcagttctttaacgtttgctac
atatgcagtcccttcatccagagggataccctgtgctgtggagggaaaaa
ggctgggaagggattggctgtggctagcagtgcacttggcgttcttcctg
tcctgtgtattccctgcttcctctgcaattccagcactagtaatcaccct
acagtcaggcatctatttctcaatcctctaaactgcaagagcgatcaacc
tactactgccccttgtctgaaacctcagcactagcaatgatgaagctgga
ggagagagtgtgaggccagcctggattgcttagtgagactgtatcaaata
acaaaaggaaaagagagagagagagagagagagagagagagagagaattt
agtataacattgtatcttagtcactcttctattgttaggaagagacagca
tgagaacggcaactcttataaaaggaagcagttaattgtgggtttgcttg
cagtttcagagggtagttgtgatcatcgtgggagcatggagggagcattt
gacagcatgcatggtgcaggagcagtggcaaactacatcctgatctgtaa
gtagcagagagaaagacagagagagacagagacagagagagacagagaca
gatgctgtgcctccctgtcatgctgtggtgaatgagcatttcaaatgacc
ctatagaaaccattcttaataaaaactcaacacaagttatcatagctgaa
ttagagatttgacatattatgtaattgtttatgttatcccatagaataga
atctgaatagatcagatttggagggtcatggggggtgaatataaattgtt
agaatgtcagtgccatggggatatggaggcctagacacaatcctacatct
ggctcaaggtaataggatgggtgttatagttaccctttccaatttacctg
gtgattaacgctgccagcaaggcaactag
gaattcctgatcttcccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgtgttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcatatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaaatggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttgcctgggagactattaataactgcttttatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttgat
taggattttgtccctttgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaacccaactcctcgtttggttaatttcttt
gaatagttcttcttgtttccacttggttaaatttcacccctgagttttga
ttatttccctgccgtctattcctcttgggtgaatttgccttccttttttt
tctagaagttttttagaggttgtttgtcaagctgctagtaatgtgcctct
ctcccgtttctctcttttgggaaggtactcaggaggctattgagtttccc
tcttttgaaaatgcttttcaatttgtgtcccaaaggttttgggtaacgtt
tgtgggccttcatttttcaatcaaatcttctaaaaaagttcatttaagtt
tcttttctatatttccttcctttgaccaaggttattcaattggaaaaagg
gctagttcaggtttcactcatggaatgtgtgctctccactatttactttt
atgatgatgtcgttttaattatgcagatcgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_73657587_73658746
seq2: B6Ng01-276D19.b_46_1224 (reverse)

seq1  CTAGTTGCCTTGCTTGCAGCGTTTTATCA-CAG--TAATTGAAAA--GTA  45
      |||||||||||||| |||||| || |||| |||   ||||| |||  |||
seq2  CTAGTTGCCTTGCTGGCAGCG-TTAATCACCAGGTAAATTGGAAAGGGTA  49

seq1  ACTATTACA-CCAT-CTA-TACC-TGAG-CAGATGTAGGAATGTGTCTTG  90
      ||||| ||| |||| ||| |||| |||| ||||||||||| ||||||| |
seq2  ACTATAACACCCATCCTATTACCTTGAGCCAGATGTAGGATTGTGTCTAG  99

seq1  GGCT-CATAT-CCCATTGCACTGACA-TCT-ACAATTTATAT---CACCC  133
      | || ||||| ||||| ||||||||| ||| |||||||||||   | |||
seq2  GCCTCCATATCCCCATGGCACTGACATTCTAACAATTTATATTCACCCCC  149

seq1  CATGACCCT-CAAATCTGATCTA-TCAGATTCTATTCTATGGGATAACAT  181
      ||||||||| ||||||||||||| ||||||||||||||||||||||||||
seq2  CATGACCCTCCAAATCTGATCTATTCAGATTCTATTCTATGGGATAACAT  199

seq1  AAACAATTACATAATATGTCAAATCTCTAATTCAGCTATGATAACTTGTG  231
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATTACATAATATGTCAAATCTCTAATTCAGCTATGATAACTTGTG  249

seq1  TTGAGTTTTTATTAAGAATGGTTTCTATAGGGTCATTTG-AATGCTCATT  280
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTGAGTTTTTATTAAGAATGGTTTCTATAGGGTCATTTGAAATGCTCATT  299

seq1  CACCACAGCATGACAGGGAGGCACAGCATCTGTCTCTGTCTCTCTCTGTC  330
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAGCATGACAGGGAGGCACAGCATCTGTCTCTGTCTCTCTCTGTC  349

seq1  TCTGTCTCTCTCTGTCTTTCTCTCTGCTACTTACAGATCAGGATGTAGTT  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTCTCTGTCTTTCTCTCTGCTACTTACAGATCAGGATGTAGTT  399

seq1  TGCCACTGCTCCTGCACCATGCATGCTGTCAAATGCTCCCTCCATGCTCC  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTGCTCCTGCACCATGCATGCTGTCAAATGCTCCCTCCATGCTCC  449

seq1  CACGATGATCACAACTACCCTCTGAAACTGCAAGCAAACCCACAATTAAC  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGATGATCACAACTACCCTCTGAAACTGCAAGCAAACCCACAATTAAC  499

seq1  TGCTTCCTTTTATAAGAGTTGCCGTTCTCATGCTGTCTCTTCCTAACAAT  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTTTTATAAGAGTTGCCGTTCTCATGCTGTCTCTTCCTAACAAT  549

seq1  AGAAGAGTGACTAAGATACAATGTTATACTAAATTCTCTCTCTCTCTCTC  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGTGACTAAGATACAATGTTATACTAAATTCTCTCTCTCTCTCTC  599

seq1  TCTCTCTCTCTCTCTCTCTTTTCCTTTTGTTATTTGATACAGTCTCACTA  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTTTTCCTTTTGTTATTTGATACAGTCTCACTA  649

seq1  AGCAATCCAGGCTGGCCTCACACTCTCTCCTCCAGCTTCATCATTGCTAG  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCCAGGCTGGCCTCACACTCTCTCCTCCAGCTTCATCATTGCTAG  699

seq1  TGCTGAGGTTTCAGACAAGGGGCAGTAGTAGGTTGATCGCTCTTGCAGTT  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGGTTTCAGACAAGGGGCAGTAGTAGGTTGATCGCTCTTGCAGTT  749

seq1  TAGAGGATTGAGAAATAGATGCCTGACTGTAGGGTGATTACTAGTGCTGG  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGATTGAGAAATAGATGCCTGACTGTAGGGTGATTACTAGTGCTGG  799

seq1  AATTGCAGAGGAAGCAGGGAATACACAGGACAGGAAGAACGCCAAGTGCA  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCAGAGGAAGCAGGGAATACACAGGACAGGAAGAACGCCAAGTGCA  849

seq1  CTGCTAGCCACAGCCAATCCCTTCCCAGCCTTTTTCCCTCCACAGCACAG  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAGCCACAGCCAATCCCTTCCCAGCCTTTTTCCCTCCACAGCACAG  899

seq1  GGTATCCCTCTGGATGAAGGGACTGCATATGTAGCAAACGTTAAAGAACT  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCCCTCTGGATGAAGGGACTGCATATGTAGCAAACGTTAAAGAACT  949

seq1  GACAGCTAACAAGCCTTTCTGGTAGCAATCATTCCTCACTGAAAAAGAAA  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTAACAAGCCTTTCTGGTAGCAATCATTCCTCACTGAAAAAGAAA  999

seq1  CAACAGAGCAAAGCAGCTTTCATTTAATTCCTATTTTCTAACATTTCTCC  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGCAAAGCAGCTTTCATTTAATTCCTATTTTCTAACATTTCTCC  1049

seq1  CTCCATCTCGAAGTTCTACCTACCTGTAACTGCTGCAACATCTCCGTCAC  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCTCGAAGTTCTACCTACCTGTAACTGCTGCAACATCTCCGTCAC  1099

seq1  CCCTTGAACCTAGAGCATTTCACACAGGGACAGGGGCTCATTGGGATGAC  1130
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGAACCTAGAGCATTTCACACAGGGACAGGGGCTCATTGGGATGAC  1149

seq1  AATGAATTCCTGGAGAGCAACAGAGAATTC  1160
      ||||||||||||||||||||||||||||||
seq2  AATGAATTCCTGGAGAGCAACAGAGAATTC  1179