BAC Information

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BAC

Clone NameB6Ng01-276F04
Chromosome4 (Build37)
Map Location 113,177,475 - 113,178,650
singlet/doubletsinglet
Overlap geneLOC242627
Upstream geneLOC665949, LOC630887, OTTMUSG00000008540, LOC100040581, A030001H23Rik, LOC433745, LOC545668, LOC230622, LOC100040607
Downstream geneLOC100040625, A630098G03Rik, LOC666048
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276F04.bB6Ng01-276F04.g
ACCGA077134GA077135
length1,1751,154
definitionB6Ng01-276F04.b B6Ng01-276F04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggacagccaggactacacagagacaccctgtcttgaaaacaa
acaaaaaaacaaaccaaaaaataaaggaaaagaaaaattctttaaggaat
cacaaatataaccagtattcttgatatgaaaattttatataatttaatat
aatgtggacatgtagattatatttgatatctgtaaacagaggagtggaaa
attgtgtatcaacatattgcatggttgtttggtggtgttcaactcagcca
taaatacgttgagaatagattaattctatgaatatgagtatttcagacat
ggacctcctctacaaactttataagctagtacttgataaaaattattaaa
caatggctttttttactcccctttgtactgagaaagacaaagaaaattgt
atactatagtacatactttccccatgagcacatagaaaaggaaaggtctt
ctatggagaatgctaaatagtcaaactctatgtcaatattttagtaagaa
aatatattgtgcaataaacaccaaatataacatattgataaattagtcaa
ttagttttattacatggatggtattttgttggcagcttcttactgtcatc
cttcacagaaaatatataaggaatagcaaacaactccagtatgctacatg
tgaaaatttgatataactcaatctaatgttatgatgcaaaagattatttt
tgatatctgtaaacaaaggagtacaaaagtgtatatgaacacatggttag
aatctatgttgacctttaattttgttataaataatagaatattaatttta
aggacataggtgaataaaataggaaattattgttttaagtgatatactgc
caaaacatatatcatgtttttccactttgaggagtagagtgtttgcataa
tcaggttaaaatatagttaaagagttgtttttagaaacaaaaatataaga
taattctaatctggctctgaacttctatagttttgccctgaaccatgtaa
tgaagtgaactttggagaggtcgaaaagctttgatatattatgattgttc
tacatgttatttaggtggattcttaataaagtcataaaatgagatgagat
ataatagaaggatcaaaaaatacaaaatgaatggctagttcaaccaagat
gatgtgacaacttgccatgatagga

gaattcagccctgcgtttgattatttcttgccattttctttttattctag
agttttcagttgtacagttaagtttctagcataagatctctgtatatttc
atataagaacttaatactatgaactttcctcagcaagactttccttgtgt
cccaaatgtttgggtgggctgtatattcattttcattgattctagaaagt
ccttaacatttttttttatttctgttttgacacagttttcattcagtaga
aagttgcttcgtttccttgcaatagtagactttctgttgtttctcctctt
gtgaacaactagtgttaattgtggttgtctgatatgatgcaagtggatat
ttcaatcttatctatttaggcatactttgtgagcaagtatatggcaaatt
ttggagaaagttccatgaggtgctaagaagaaattatatttgttggggtt
gaagaatttccacaaaaccatacaaacacttatctcagttatgtaagagt
cgtttattgaatgcacaccccaagagtgatgaatcaggaccacaaaaaaa
ggactcaggagcctaactgtggttccagtcttttcttagggccagctttt
taaagtaaaaaacaggttcataagttgaaaaggtaaggatagtggcagta
ctacattttgagtaagtgaacaaagtattatcagctgaattttaagatga
ttggtcccaagtgagttaagaggggtaacagacagctggtgaacagggga
gtttcagagaatttagataacagagcataaatagttcaatgatagtgtta
tgggcattttggcaatatttaagtgtcagctatggataattacttctggg
aattggagtctgagatcgggaacttaatttcacctttgaggcaaaaggag
actaaatacaaaatagcttgatttatgttaaaaggaacagatttcaaaat
attctttttgtttggggtggaatgtattatagaaattgttagagtatttg
attacagatctgtgagctcctgattttatgttagtttttttctgggatga
cctgtccatggtgggaacttggtattaaggcaacgactgtccatggcaaa
attaagcttagtagttgtaattgtatgcgaccttaacttggagagattaa
ctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_113177475_113178650
seq2: B6Ng01-276F04.b_46_1220 (reverse)

seq1  TCCTATCAT-GCCAGTTGTCACATTCATCTTTGGTTGAACCTAGCAATCA  49
      ||||||||| || |||||||||| ||||| ||||||||| ||||| ||  
seq2  TCCTATCATGGCAAGTTGTCACA-TCATC-TTGGTTGAA-CTAGCCATTC  47

seq1  ATTTTGTATTTTTTG-TCC-TCTA-TATATCTCATCTTCATTTTATGAAC  96
      ||||||||||||||| ||| |||| ||||||||||| |||||||||| ||
seq2  ATTTTGTATTTTTTGATCCTTCTATTATATCTCATC-TCATTTTATG-AC  95

seq1  TTTA-TAAGAATTCCACCTAAATAACAATGTAG-ACATTCAT-ATATATC  143
      |||| |||||| |||||||||||||| |||||| ||| |||| |||||||
seq2  TTTATTAAGAA-TCCACCTAAATAAC-ATGTAGAACAATCATAATATATC  143

seq1  AAAGCCTTTTCGACCTCT-CAAAGTTCACTTCATTACATGGTTCAGGGCA  192
      |||| ||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAG-CTTTTCGACCTCTCCAAAGTTCACTTCATTACATGGTTCAGGGCA  192

seq1  AAACTATAGAAGTTCAGAGCCAGATTAGAATTATCTTTATATTTTTGTTT  242
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAACTATAGAAGTTCAGAGCCAGATTAGAATTATC-TTATATTTTTGTTT  241

seq1  CTAAAAACAACTCTTTAACTATATTTTAACCTGATTATGCAAACACTCTA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAACAACTCTTTAACTATATTTTAACCTGATTATGCAAACACTCTA  291

seq1  CTCCTCAAAGTGGAAAAACATGATATATGTTTTGGCAGTATATCACTTAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAAAGTGGAAAAACATGATATATGTTTTGGCAGTATATCACTTAA  341

seq1  AACAATAATTTCCTATTTTATTCACCTATGTCCTTAAAATTAATATTCTA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAATTTCCTATTTTATTCACCTATGTCCTTAAAATTAATATTCTA  391

seq1  TTATTTATAACAAAATTAAAGGTCAACATAGATTCTAACCATGTGTTCAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATAACAAAATTAAAGGTCAACATAGATTCTAACCATGTGTTCAT  441

seq1  ATACACTTTTGTACTCCTTTGTTTACAGATATCAAAAATAATCTTTTGCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTTTTGTACTCCTTTGTTTACAGATATCAAAAATAATCTTTTGCA  491

seq1  TCATAACATTAGATTGAGTTATATCAAATTTTCACATGTAGCATACTGGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAACATTAGATTGAGTTATATCAAATTTTCACATGTAGCATACTGGA  541

seq1  GTTGTTTGCTATTCCTTATATATTTTCTGTGAAGGATGACAGTAAGAAGC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGCTATTCCTTATATATTTTCTGTGAAGGATGACAGTAAGAAGC  591

seq1  TGCCAACAAAATACCATCCATGTAATAAAACTAATTGACTAATTTATCAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACAAAATACCATCCATGTAATAAAACTAATTGACTAATTTATCAA  641

seq1  TATGTTATATTTGGTGTTTATTGCACAATATATTTTCTTACTAAAATATT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTATATTTGGTGTTTATTGCACAATATATTTTCTTACTAAAATATT  691

seq1  GACATAGAGTTTGACTATTTAGCATTCTCCATAGAAGACCTTTCCTTTTC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGAGTTTGACTATTTAGCATTCTCCATAGAAGACCTTTCCTTTTC  741

seq1  TATGTGCTCATGGGGAAAGTATGTACTATAGTATACAATTTTCTTTGTCT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCTCATGGGGAAAGTATGTACTATAGTATACAATTTTCTTTGTCT  791

seq1  TTCTCAGTACAAAGGGGAGTAAAAAAAGCCATTGTTTAATAATTTTTATC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGTACAAAGGGGAGTAAAAAAAGCCATTGTTTAATAATTTTTATC  841

seq1  AAGTACTAGCTTATAAAGTTTGTAGAGGAGGTCCATGTCTGAAATACTCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTAGCTTATAAAGTTTGTAGAGGAGGTCCATGTCTGAAATACTCA  891

seq1  TATTCATAGAATTAATCTATTCTCAACGTATTTATGGCTGAGTTGAACAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATAGAATTAATCTATTCTCAACGTATTTATGGCTGAGTTGAACAC  941

seq1  CACCAAACAACCATGCAATATGTTGATACACAATTTTCCACTCCTCTGTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAACAACCATGCAATATGTTGATACACAATTTTCCACTCCTCTGTT  991

seq1  TACAGATATCAAATATAATCTACATGTCCACATTATATTAAATTATATAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATATCAAATATAATCTACATGTCCACATTATATTAAATTATATAA  1041

seq1  AATTTTCATATCAAGAATACTGGTTATATTTGTGATTCCTTAAAGAATTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCATATCAAGAATACTGGTTATATTTGTGATTCCTTAAAGAATTT  1091

seq1  TTCTTTTCCTTTATTTTTTGGTTTGTTTTTTTGTTTGTTTTCAAGACAGG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCCTTTATTTTTTGGTTTGTTTTTTTGTTTGTTTTCAAGACAGG  1141

seq1  GTGTCTCTGTGTAGTCCTGGCTGTCCTGGAATTC  1176
      ||||||||||||||||||||||||||||||||||
seq2  GTGTCTCTGTGTAGTCCTGGCTGTCCTGGAATTC  1175


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