BAC Information

Click to search

BAC

Clone NameB6Ng01-277B19
Chromosome4 (Build37)
Map Location 95,426,364 - 95,427,485
singlet/doubletsinglet
Overlap gene2310009E04Rik
Upstream geneTek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411
Downstream geneHook1, Cyp2j13, LOC242546, LOC546837, Cyp2j11, LOC665095, Cyp2j6, Cyp2j9, Cyp2j5, LOC100039415, LOC620779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277B19.bB6Ng01-277B19.g
ACCGA077718GA077719
length1,2171,111
definitionB6Ng01-277B19.b B6Ng01-277B19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagaccttcaaagaagaggtaataccaataattctcaaacg
attccacaacatagaaacagaaggaacagtacctgattattccatgaagc
cactgttattctaatacctaaaccacacaaagagccaacaaagtaagaga
acttcaggccaatttccctcctgaatatagatgcaaaaatactcaataaa
attctcaaaaaccaaatccaagaaaacatcaaaaccatcattcactacaa
tcaagtaggcctcatcccagagacacagagatggttcaatgtgtgaaaat
caatgtactccactaaataaacaaactcaaagaaaaagattgcattatct
cattagatgctgaaaaagcctgtgacaaaatatgacactccttcatttta
aaagtattggagaccaggaattcatggcaaatacctaaacatgataaaag
caatatacagcaaaccaacagccaatatcaaattcaaatgagagaaactt
gaagcaatcccactaaaatcagggactagacaaggctgcccactttctcc
ctacctattcaatatacttgaagtcccagccagagcaattcgacaacaag
aggagatcaaggggatacaaattagaaaggaagaagtcaaaatatcacta
tttgcagatgatatgatagtatatataagtgaccctaaaatttccaccag
agaactcctgctcatgaattggcagaattaacatagtaaaaaatgccatc
ctaccaaaggcaaactagagattcaatgcaatccccatcaaaattccaac
acaattcttcaaagacatggaaagagtaattctcaacttcatatggaaaa
acaaaaaaacccaggataaaacaaaaaaattctcaacagtaaaagaaccc
tctggaagaatcaccaaattcctgacctcaagctgtactagtaatagtga
caaaacccaagtagtattgttacagagacagataatgcatagaactgaga
cccagaataaacccacaccaccttatggactcttgatctttgacaaagaa
gcccaaaaccataaagtggaaaatgaaagcattcttcaataaattggtgc
ttggtcaactgggcagttctggcatgtagaaaaatgccaattggaatcca
tattatcacctggtacaagcctccaagttcagtgtgaactccaaggaaac
ctcctctaaattagaac
gaattccaagctttggtctgtcaatgttcaactaaccccacaaaacctcc
agaagcttccaaaggactgaaatccatactaaaggaggaggtacagtcag
aagtcagagagagaactagccagcaaattaaggtccttttctttgacatt
tcagccctcttcccttcttagctaagcctccccatgtctacttggggtct
cctgaagtgtcttagggaacttcatcaggactgctggttccttattccac
ctccaggaagacaattgtcagataatcctataaatgaaaccattcctcca
ccaacaagagaaatttgctaatgaaaaccaatgtttgctttcctcagaag
aaaacactaatagttcctatgtctcagatgtagactgtgtgcctcacaca
tagcgatagggtttgcccaggactgaggcaggtcacataaagtttcagaa
agaagaaaatatcttttcctcactactaccttgggcttgtgtcagatgcc
tctgtagcacaaaacagataacaaaaaatgcagtggtttactgtaagttt
cgtgtgacctgagagccctcctaaggccatgaagacccaaagaaacagtt
tcttgagtgctttaggcgaggttggacagagaatacagtgaagtttgagc
ccagcagttctgaaatagaggcagcttagtgaggcctctgttcagatggt
tctcagagagtctttctccctagacaaaaggatgtggctgacctcttgaa
gggaacttagcacatgaaggtcttacaacctgcttcaaggtcagggtcag
aaaacccaaaggctttttccctgcttcagaggagatgaaagtagcttctt
gctcctgtgggttttctccagtaccttcagcacaaaatattcaggacttc
agtgcaccatatacggagacagcatttcctattccataccaaccaaaata
ttggagatgatgacctaataagtaagacagtattcctatcctatatctga
gaaacctggggctcaagaggtgactctgtataggagttacttagcaacag
agagtaaagctggatcaaggttcaatcttgatgacatcggatcacacaca
agttctgcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_95426364_95427485
seq2: B6Ng01-277B19.g_64_1174

seq1  GAATTCCAAGCTTTGGTCTGTCAATGTTCAACTAACCCCACAAAACCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCTTTGGTCTGTCAATGTTCAACTAACCCCACAAAACCTCC  50

seq1  AGAAGCTTCCAAAGGACTGAAATCCATACTAAAGGAGGAGGTACAGTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTTCCAAAGGACTGAAATCCATACTAAAGGAGGAGGTACAGTCAG  100

seq1  AAGTCAGAGAGAGAACTAGCCAGCAAATTAAGGTCCTTTTCTTTGACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGAGAGAGAACTAGCCAGCAAATTAAGGTCCTTTTCTTTGACATT  150

seq1  TCAGCCCTCTTCCCTTCTTAGCTAAGCCTCCCCATGTCTACTTGGGGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCTCTTCCCTTCTTAGCTAAGCCTCCCCATGTCTACTTGGGGTCT  200

seq1  CCTGAAGTGTCTTAGGGAACTTCATCAGGACTGCTGGTTCCTTATTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGTGTCTTAGGGAACTTCATCAGGACTGCTGGTTCCTTATTCCAC  250

seq1  CTCCAGGAAGACAATTGTCAGATAATCCTATAAATGAAACCATTCCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGAAGACAATTGTCAGATAATCCTATAAATGAAACCATTCCTCCA  300

seq1  CCAACAAGAGAAATTTGCTAATGAAAACCAATGTTTGCTTTCCTCAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAGAGAAATTTGCTAATGAAAACCAATGTTTGCTTTCCTCAGAAG  350

seq1  AAAACACTAATAGTTCCTATGTCTCAGATGTAGACTGTGTGCCTCACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTAATAGTTCCTATGTCTCAGATGTAGACTGTGTGCCTCACACA  400

seq1  TAGCGATAGGGTTTGCCCAGGACTGAGGCAGGTCACATAAAGTTTCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGATAGGGTTTGCCCAGGACTGAGGCAGGTCACATAAAGTTTCAGAA  450

seq1  AGAAGAAAATATCTTTTCCTCACTACTACCTTGGGCTTGTGTCAGATGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAATATCTTTTCCTCACTACTACCTTGGGCTTGTGTCAGATGCC  500

seq1  TCTGTAGCACAAAACAGATAACAAAAAATGCAGTGGTTTACTGTAAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGCACAAAACAGATAACAAAAAATGCAGTGGTTTACTGTAAGTTT  550

seq1  CGTGTGACCTGAGAGCCCTCCTAAGGCCATGAAGACCCAAAGAAACAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGACCTGAGAGCCCTCCTAAGGCCATGAAGACCCAAAGAAACAGTT  600

seq1  TCTTGAGTGCTTTAGGCGAGGTTGGACAGAGAATACAGTGAAGTTTGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGTGCTTTAGGCGAGGTTGGACAGAGAATACAGTGAAGTTTGAGC  650

seq1  CCAGCAGTTCTGAAATAGAGGCAGCTTAGTGAGGCCTCTGTTCAGATGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGTTCTGAAATAGAGGCAGCTTAGTGAGGCCTCTGTTCAGATGGT  700

seq1  TCTCAGAGAGTCTTTCTCCCTAGACAAAAGGATGTGGCTGACCTCTTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAGAGTCTTTCTCCCTAGACAAAAGGATGTGGCTGACCTCTTGAA  750

seq1  GGGAACTTAGCACATGAAGGTCTTACAACCTGCTTCAAGGTCAGGGTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTTAGCACATGAAGGTCTTACAACCTGCTTCAAGGTCAGGGTCAG  800

seq1  AAAACCC-AAGGCTTTTTCCCTGCTTCAGAGGAGATGAAAGTAGCTTCTT  849
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCAAAGGCTTTTTCCCTGCTTCAGAGGAGATGAAAGTAGCTTCTT  850

seq1  GCTCCTGTGGGTTTTCTCCAGTACCTTCAGCACAAAATATTCAGGACTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGTGGGTTTTCTCCAGTACCTTCAGCACAAAATATTCAGGACTTC  900

seq1  AGTGCACCATATACGGAGACAGCATTTCCTATTCCATACCAACCAAAAAT  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGTGCACCATATACGGAGACAGCATTTCCTATTCCATACCAACC-AAAAT  949

seq1  ATTGGAGATGATGACCTAATAAAGTAAAGACAGTATTCCTATCCTATATC  999
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  ATTGGAGATGATGACCTAAT-AAGT-AAGACAGTATTCCTATCCTATATC  997

seq1  TGAGAAACCTGGGGCTCAAAGAGGTGACTCTGTATAGGAGTTAACCTAGC  1049
      ||||||||||||||||| |||||||||||||||||||||||| || ||||
seq2  TGAGAAACCTGGGGCTC-AAGAGGTGACTCTGTATAGGAGTT-ACTTAGC  1045

seq1  AAACAGAGAGTAAAGCTGGGAATCAGGGTTCCATCTGAATGACATCAGAT  1099
       ||||||||||||||||||  |||| ||||| ||||  |||||||| |||
seq2  -AACAGAGAGTAAAGCTGG--ATCAAGGTTCAATCTTGATGACATCGGAT  1092

seq1  CAACACCAACCAAGTTCTGCAGA  1122
      ||    ||  |||||||||||||
seq2  CA----CACACAAGTTCTGCAGA  1111