BAC Information

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BAC

Clone NameB6Ng01-277G04
Chromosome4 (Build37)
Map Location 89,698,023 - 89,699,131
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040617, Mtap, LOC625574, Cdkn2a, Cdkn2b, LOC664785, Dmrta1
Downstream geneZfp352, LOC619842, LOC435792, Ppia-ps4_804.1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277G04.bB6Ng01-277G04.g
ACCGA077920GA077921
length1,1001,174
definitionB6Ng01-277G04.b B6Ng01-277G04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaacggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttagaataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgatggtgtcttttgccttgcagacgctttgcaatttta
tgaggtcccttttgttgattcttgatcttgcagcacaagccattgctgtt
ctattcaggaattttccccctgtacccatatctttgaaccttttccctac
tttctcctctgtaagtttcagtgtctctggttttatgtggagttccttaa
cccacttagatttgaccttagtacaaggagataggtttctgactctagtt
tcagaatagtatgctaccgatttgaaaaaacttcctcctttacttataaa
gagtagtgagcgtagcagcatgtcttctggagcctaacagaccagtcatt
attagcataatttttttcaacattgcagcactcaagttgctagaggaatg
attttccaaaggatgtctgcacaagccaaatacagctctgaaaagtaggt
catgaaaagtcaatgatccgggactccccggaacttaggaaattagtctg
aaaaggtgagagggtgcacctgagaactggacagggagccgctgaggcag
caccccttgcgggccgcagacagcaggccaccgtcaggaccagaggacag
gtgtccgcctggcttgggaggcggcctcagcctcagcagcagcagtcgcc
atcttggttccgggactccacagaacttaggaaattagtctgaacaggtg
agagggtgcgccagagaaccggacagctttctgggacaggctgaagcaca
gagccgctgagcaacaccctttgtgagccacagacagccggccaacatcc
tgaccagaggacagtgtccgcctggctcagagcgctcagcctcagcagca
gagttgccatcttgttctggactccgcctaagtaggaatttagtctgcac
aggtgagagtctgcaccaccagagctgacaggccttctggactgccgaag


gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaagtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttgatg
ggattgcaagcttttacaaccactctggaaatcagtctggaggttcctca
gaaaactggatatggtactaacagaggatcctgcaatacctctcctggag
aagaagaagatgttccaactggtaagaaggacacatgctccactatgttc
atagcagccttatttataatagccagaagctggaaagaacccagatgccc
ctcaacagaggaatggatacagaaaatgtggtacatttacacaatggagt
actactcagctattaaaaggaatgaatttatgaaattcctagccaaatgg
atggacctggagggtatcatcctgagtgaggtaacccaatcacaaaagaa
ctcacacaatatgtactcactgataagtggatattagcccagaaacttag
gatacccaagatataagatacaatttgctaaacgcatgaaactcaagaag
aacgaagaccaaagtgtggacactttgccccttcttagaagtgggaacaa
aacacccatggaaggagttacagagacaaagtttggagctgtgtcaaaag
gatggaccatctagagcctgccatatccagggttccatcccataatcagc
ttccaaacgctgacaccattgcatatactagcaagattttgctgaaagga
cccaaatatagctgtctcttgtgagactagtccggggcctagcaaacaca
taaatgggatgctcacagtcagctattggatggatcacagggccccaatg
gagagctagagaaagtaccccagaagctaaaggatctgcacctataggta
gacacattatgactaaccagtactcagagcttctgacttcttagctgcat
atgtatcaaagaatggactagtcgccatcccactggagagagtctcaatt
gtatttgcacctttatatggaacctagttacaggtaactacaaggccaaa
aagttgcgaagtgggtttgcctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_89698023_89699131
seq2: B6Ng01-277G04.b_44_1143

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAACGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAACGGGGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGAATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGAATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150

seq1  TTTTGTCTTATTGATGGTGTCTTTTGCCTTGCAGACGCTTTGCAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGATGGTGTCTTTTGCCTTGCAGACGCTTTGCAATTTTA  200

seq1  TGAGGTCCCTTTTGTTGATTCTTGATCTTGCAGCACAAGCCATTGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCCCTTTTGTTGATTCTTGATCTTGCAGCACAAGCCATTGCTGTT  250

seq1  CTATTCAGGAATTTTCCCCCTGTACCCATATCTTTGAACCTTTTCCCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAGGAATTTTCCCCCTGTACCCATATCTTTGAACCTTTTCCCTAC  300

seq1  TTTCTCCTCTGTAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCTGTAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAA  350

seq1  CCCACTTAGATTTGACCTTAGTACAAGGAGATAGGTTTCTGACTCTAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTAGATTTGACCTTAGTACAAGGAGATAGGTTTCTGACTCTAGTT  400

seq1  TCAGAATAGTATGCTACCGATTTGAAAAAACTTCCTCCTTTACTTATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATAGTATGCTACCGATTTGAAAAAACTTCCTCCTTTACTTATAAA  450

seq1  GAGTAGTGAGCGTAGCAGCATGTCTTCTGGAGCCTAACAGACCAGTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTGAGCGTAGCAGCATGTCTTCTGGAGCCTAACAGACCAGTCATT  500

seq1  ATTAGCATAATTTTTTTCAACATTGCAGCACTCAAGTTGCTAGAGGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCATAATTTTTTTCAACATTGCAGCACTCAAGTTGCTAGAGGAATG  550

seq1  ATTTTCCAAAGGATGTCTGCACAAGCCAAATACAGCTCTGAAAAGTAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCAAAGGATGTCTGCACAAGCCAAATACAGCTCTGAAAAGTAGGT  600

seq1  CATGAAAAGTCAATGATCCGGGACTCCCCGGAACTTAGGAAATTAGTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAAGTCAATGATCCGGGACTCCCCGGAACTTAGGAAATTAGTCTG  650

seq1  AAAAGGTGAGAGGGTGCACCTGAGAACTGGACAGGGAGCCGCTGAGGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTGAGAGGGTGCACCTGAGAACTGGACAGGGAGCCGCTGAGGCAG  700

seq1  CACCCCTTGCGGGCCGCAGACAGCAGGCCACCGTCAGGACCAGAGGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTTGCGGGCCGCAGACAGCAGGCCACCGTCAGGACCAGAGGACAG  750

seq1  GTGTCCGCCTGGCTTGGGAGGCGGCCTCAGCCTCAGCAGCAGCAGTCGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCGCCTGGCTTGGGAGGCGGCCTCAGCCTCAGCAGCAGCAGTCGCC  800

seq1  ATCTTGGTTCCGGGACTCCACAGAACTTAGGAAATTAGTCTGAACAGGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGTTCCGGGACTCCACAGAACTTAGGAAATTAGTCTGAACAGGTG  850

seq1  AGAGGGTGCGCCAGAGAACCGGACAGC-TTCTGGGACAGGCTGAAGCACA  899
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGAGGGTGCGCCAGAGAACCGGACAGCTTTCTGGGACAGGCTGAAGCACA  900

seq1  GAGCCGCTGAGGCAACACCCTTTGTGAGCCACAGACAGCCGGCCAACATC  949
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGCTGA-GCAACACCCTTTGTGAGCCACAGACAGCCGGCCAACATC  949

seq1  CTGACCAGAGGACAGGTGTCCGCCTGGCTCAGGAGGCGGCCTCAGCCTCA  999
      |||||||||||||| |||||||||||||||||   |||  ||||||||||
seq2  CTGACCAGAGGACA-GTGTCCGCCTGGCTCAG--AGCG--CTCAGCCTCA  994

seq1  GCAGCAGAGGTTGCCATCTTGGTTCCGGGACTCCGCTAAAGTTAGGAATT  1049
      |||||||| ||||||||||||  | | |||||||||  ||| ||||||||
seq2  GCAGCAGA-GTTGCCATCTTG--TTCTGGACTCCGCCTAAG-TAGGAATT  1040

seq1  TAGTCTGCACAGGTGAGAGTCTGCACCACAGAAGCTGACAG--CTTCTGG  1097
      |||||||||||||||||||||||||||||   |||||||||  |||||||
seq2  TAGTCTGCACAGGTGAGAGTCTGCACCACCAGAGCTGACAGGCCTTCTGG  1090

seq1  GAACTGCCAAAG  1109
        |||||| |||
seq2  --ACTGCCGAAG  1100


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