BAC Information

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BAC

Clone NameB6Ng01-277G17
Chromosome4 (Build37)
Map Location 55,971,603 - 56,090,663
singlet/doubletdoublet
Overlap genenone
Upstream geneZfp462, LOC670211, Rad23b, LOC666953, LOC100041348, Klf4
Downstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1, D730040F13Rik, 6430704M03Rik, Epb4.1l4b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277G17.bB6Ng01-277G17.g
ACCGA077946GA077947
length507875
definitionB6Ng01-277G17.b B6Ng01-277G17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,090,152 - 56,090,663)(55,971,603 - 55,972,478)
sequence
aggcaatgttaatcctatactggcaaagtgggtataaggttttccagggg
ccacacagggctgtcatagtagaagttctgccagcttctgctaagcacct
cagttaccttccattttctgtcttcctccctagagtggtagtcacactgt
ttgctcagtaaaaaaaaaaaaaaaaaaaaaatatatatatatatatatat
atatatatatatatatatatatatatatatataatgtggaaaatatatat
atatatatatataaatatatatatatatctgttgatacccatcaagtgac
atatatatatatatatacaaagatggatgtatctccagaattataattat
tgggataaaagcctttcacttgcctagagggggcaagtataactctgaat
ctttctctacagaaataagaatctcagttgaggctactctttgtgaaata
gtgtctgagtcagcagtctgatatattgacctatattctatttttcccag
gatttca
gaattccagcctattgagtatatatgtgtggcttactgcttaggggctga
acaaaaaaccccagtcttttcccaagatgagcagttcaatttgagcaaaa
ggatagtctaatgacaggactgaggagcacagggttgaggaccaaagagt
attattttgcacaacttcagaagactttaatagcaaacacattgaagaat
ccaatgggctttagagtcggagtgagctgcctgggcatctttgccttgtc
ccactaactatatgataggttgcaatttacccaatctttttgaggctaaa
tttccttatttgtgaagcagaggtattgttaggtatatttatctgaaact
gatcttataaacaatagaggaaatttcatatgtggaaagtactcattaaa
aaccaaagcaatagccacatgttagtgattattgattattttcattatta
ttgagtaatcgctaacaacaacatgggctgccatgtggtgcccgtggggc
tgctgttctgggctgagggattgcagcagcaacattagcacatctcaggc
tccaaagtgacatccgatcactggaaggctttgtaaataagtccctgacc
taattaagagcagatccacggatatggactttcttttacataatagtagc
agagaccacgacacagaaaaagcctgtggaggcacttcctcaagttccca
tgaacattgctggtacatgcatcttagcagtatggctccaacttaatttc
tctctcagtgggtaacctctctgccttttagggaatgagaaaatgtttaa
ggagcgagcacagctatccattattctcagaacatgtcctctttattagt
ccaccaactgcaacccctttaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_56090152_56090663
seq2: B6Ng01-277G17.b_49_561 (reverse)

seq1  TGAAATCCTGGGAAATATAGAATCTAGGCCAATGCTGCAGACTGCTGACT  50
      ||||||||||||||| ||||||| |||| ||||    |||||||||||||
seq2  TGAAATCCTGGGAAAAATAGAATATAGGTCAATATATCAGACTGCTGACT  50

seq1  CAGCCACTATTTCCCTAGGGGTAGCCTCAGCTGTGATTCTTGCTCCCGTA  100
      ||| ||||||||| | | | ||||||||| ||| |||||||  | | |||
seq2  CAGACACTATTTCACAAAGAGTAGCCTCAACTGAGATTCTTATTTCTGTA  100

seq1  GGGAAAGACTCAGGGTTAAACTGGCCCCCTCTAGGCACGTGAAAGGCTCT  150
      | |||||| |||| |||| ||| |||||||||||||| |||||||||| |
seq2  GAGAAAGATTCAGAGTTATACTTGCCCCCTCTAGGCAAGTGAAAGGCTTT  150

seq1  TCTCCCATGAATTTGAATTCTGGAGGAACAACCAACCTTGTATAAATGAA  200
      | |||||  ||||  ||||||||||  ||| ||| | ||||||| ||  |
seq2  TATCCCAATAATTATAATTCTGGAGATACATCCATCTTTGTATATATATA  200

seq1  TACAACTGACACATGGGGGGTTGCAACAGGGCGTGCTAGCAGCTCCCCCC  250
      || |  || ||| ||  ||||  ||||||       ||     |      
seq2  TATATATGTCACTTGATGGGTATCAACAGATATATATATATATTTATATA  250

seq1  GCCCCAGA-GTTGGTTTTCCACATTATATATATATATATATATATATATA  299
           | |  |   ||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATTTTCCACATTATATATATATATATATATATATATA  300

seq1  TATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTAC  350

seq1  TGAGCAAACAGTGTGACTACCACTCTAGGGAGGAAGACAGAAAATGGAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAACAGTGTGACTACCACTCTAGGGAGGAAGACAGAAAATGGAAG  400

seq1  GTAACTGAGGTGCTTAGCAGAAGCTGGCAGAACTTCTACTATGACAGCCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGAGGTGCTTAGCAGAAGCTGGCAGAACTTCTACTATGACAGCCC  450

seq1  TGTGTGGCCCCTGGAAAACCTTATACCCACTTTGCCAGTATAGGATTAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGCCCCTGGAAAACCTTATACCCACTTTGCCAGTATAGGATTAAC  500

seq1  ATTGCCTGAATTC  512
      |||||||||||||
seq2  ATTGCCTGAATTC  513

seq1: chr4_55971603_55972478
seq2: B6Ng01-277G17.g_66_940

seq1  GAATTCCAGCCTATTGAGTATATATGTGTGGCTTACTGCTTAGGGGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCTATTGAGTATATATGTGTGGCTTACTGCTTAGGGGCTGA  50

seq1  ACAAAAAACCCCAGTCTTTTCCCAAGATGAGCAGTTCAATTTGAGCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAACCCCAGTCTTTTCCCAAGATGAGCAGTTCAATTTGAGCAAAA  100

seq1  GGATAGTCTAATGACAGGACTGAGGAGCACAGGGTTGAGGACCAAAGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGTCTAATGACAGGACTGAGGAGCACAGGGTTGAGGACCAAAGAGT  150

seq1  ATTATTTTGCACAACTTCAGAAGACTTTAATAGCAAACACATTGAAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTGCACAACTTCAGAAGACTTTAATAGCAAACACATTGAAGAAT  200

seq1  CCAATGGGCTTTAGAGTCGGAGTGAGCTGCCTGGGCATCTTTGCCTTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGGCTTTAGAGTCGGAGTGAGCTGCCTGGGCATCTTTGCCTTGTC  250

seq1  CCACTAACTATATGATAGGTTGCAATTTACCCAATCTTTTTGAGGCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAACTATATGATAGGTTGCAATTTACCCAATCTTTTTGAGGCTAAA  300

seq1  TTTCCTTATTTGTGAAGCAGAGGTATTGTTAGGTATATTTATCTGAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTATTTGTGAAGCAGAGGTATTGTTAGGTATATTTATCTGAAACT  350

seq1  GATCTTATAAACAATAGAGGAAATTTCATATGTGGAAAGTACTCATTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTATAAACAATAGAGGAAATTTCATATGTGGAAAGTACTCATTAAA  400

seq1  AACCAAAGCAATAGCCACATGTTAGTGATTATTGATTATTTTCATTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAGCAATAGCCACATGTTAGTGATTATTGATTATTTTCATTATTA  450

seq1  TTGAGTAATCGCTAACAACAACATGGGCTGCCATGTGGTGCCCGTGGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTAATCGCTAACAACAACATGGGCTGCCATGTGGTGCCCGTGGGGC  500

seq1  TGCTGTTCTGGGCTGAGGGATTGCAGCAGCAACATTAGCACATCTCAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTCTGGGCTGAGGGATTGCAGCAGCAACATTAGCACATCTCAGGC  550

seq1  TCCAAAGTGACATCCGATCACTGGAAGGCTTTGTAAATAAGTCCCTGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGTGACATCCGATCACTGGAAGGCTTTGTAAATAAGTCCCTGACC  600

seq1  TAATTAAGAGCAGATCCACGGATATGGACTTTCTTTTACATAATAGTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAGAGCAGATCCACGGATATGGACTTTCTTTTACATAATAGTAGC  650

seq1  AGAGACCACGACACAGAAAAAGCCTGGGGAGGCACTTCCTCAAGTTCCCA  700
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGAGACCACGACACAGAAAAAGCCTGTGGAGGCACTTCCTCAAGTTCCCA  700

seq1  TGAACATTGCTGGTACATGCATCTTAGGCAGTATGGCTCCAACTTAATTT  750
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGAACATTGCTGGTACATGCATCTTA-GCAGTATGGCTCCAACTTAATTT  749

seq1  CTCTCTCAGGTGACTTAACCTCTCTGCCTTTTAGGGAATGAGAAAATGTT  800
      |||||||||  |   |||||||||||||||||||||||||||||||||||
seq2  CTCTCTCAGTGG--GTAACCTCTCTGCCTTTTAGGGAATGAGAAAATGTT  797

seq1  TAAGGAGCGAGCACAGCTATCCATTATTCTCAGAACATGTCCTCTTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGCGAGCACAGCTATCCATTATTCTCAGAACATGTCCTCTTTATT  847

seq1  AGT-CACCAACTGCAA-CCCTTTAAGAA  876
      ||| |||||||||||| |||||||||||
seq2  AGTCCACCAACTGCAACCCCTTTAAGAA  875