BAC Information

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BAC

Clone NameB6Ng01-279D12
Chromosome4 (Build37)
Map Location 50,316,168 - 50,317,355
singlet/doubletsinglet
Overlap genenone
Upstream geneE130309F12Rik, LOC666602, Rbpsuh-ps1, C730036D15Rik, LOC100040919, LOC666617, Rbpsuh-ps2, LOC230161, Baat, Mrpl50, Zfp189, Aldob, 2810432L12Rik, LOC100040742, Rnf20, Ppp3r2, LOC666663
Downstream geneLOC100040979, LOC666681, LOC100040814
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279D12.bB6Ng01-279D12.g
ACCGA079254GA079255
length5851,181
definitionB6Ng01-279D12.b B6Ng01-279D12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattccaggacagccaggactacacagagaaaccctgtctcaaaaaaa
aagtaacaaaattaatttctactgattgtgtttttaagctggtgcctagg
cattttggtttaggaagattgtcattttaggtgctgatatctggtcttgt
tttcattgattgggggttttgttccttggtttctgtcctttctttgtgtc
ttagaagaaattctaagcgatcctaataggtgtagacagtggggttccag
gtaaaatgtgtttctaggtattcagggttaactttaggaatgagaatgga
caagaagaagggtggtgctgatagggtccacaggagggtgaaaagaaggg
aattctatcagtatctgctgatttccctgggattggggctagagagttag
gaagtgctctgctgcagaggtgggcatgaggctaggggattggatttgga
ggagaagagggataggtaaagatctgcaggtggcctacccatttccctgg
ccagagtaccctgtgagtttcccagagagagcttgcttgagtcaggactt
ggataaagcaatgaggcagtgagggaaattaggag
gaattcttgtcacctctattccaggcatgaaatgattgtgttaatatgtc
accttttgttagttagcacttctgcttcatcagtcaaactgccagacatg
ttagcaaactaagtaaaaacacaagataaaatctgtacaatgcctaaaca
agcctttaaactgatatcatgttttgctgggtggaagttgccttcagttc
cagcactcagaaggcagagacaggtgaatctctgattttgaggccagcct
agtctcatgtttatatcactataaattacatacacaactggatgagaagg
gtaaaaaggtctggatcaataaaaaattttctcccattttgatgtttttt
tcatcattcatcactgtcatattatatatggaacatactggtgtgtgctg
agatattaattcatgtagcaaagaatattatatctatgttcaattactga
ctgaacagattattattgatgggctcacaaatgccatttaataaactttt
tattagttctgccactaaagtcaaacatgctttgctttcactataaaggc
aaaatataaaaacttagataataagttgtatgaatgaacaggtcacataa
aaatcacaattttataatgataatgaattgagctagaagtgttatcctga
ggggcattaataaaaaatgaaaataaaagaacccaaatactaagtctgca
caggtcagctcaggaactgcagagggtaagcaagcagactgcagaagtgg
cacagcttctgggacagaaccctatttgggctccagacatccaggcacct
tccccaccagaggagaggtggctgcctgggagggctctgacctccagagc
aagtgaaggagccatcttgtgtcccaggtccctctgagaccagtctgcac
agatcagctcacagactgcggagggtgagcaagaggaatgcagagcaaac
agcttctgggacaggcagagctacacagcttctgggacagaccccatttc
gtgctcagacatcagcacttctctgccagagcagaggtgaccacctgaaa
gggctctgaccacagagcaggtgagggagcatcttggtgttctgggtcac
tggagacagtcttgtgcagctggaaaccacgactggctaggaaacacatc
ttctggacaggtcccttgttcaggggccttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_50316168_50317355
seq2: B6Ng01-279D12.g_63_1243 (reverse)

seq1  GAAGG--CCTGAAACAGGG-CCTGTCCCAGAAGATGTGTTTCCTCTGCAG  47
      |||||  ||||||  |||| ||||| ||||||||||||||||||   |||
seq2  GAAGGCCCCTGAACAAGGGACCTGT-CCAGAAGATGTGTTTCCTAGCCAG  49

seq1  TCTGTGTGCTCAGCTGCAC-AGACTGGTCTCCAAGTGACCCAGGACA-CA  95
      ||   ||   ||||||||| ||||| |||||| |||||||||| ||| ||
seq2  TCGTGGTTTCCAGCTGCACAAGACT-GTCTCC-AGTGACCCAGAACACCA  97

seq1  AGATGGCTCCCTCACCTGCTCTGGTGGTCAGAGCCCTTTCAGGTGGTCAC  145
      |||| ||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGAT-GCTCCCTCACCTGCTCT-GTGGTCAGAGCCCTTTCAGGTGGTCAC  145

seq1  CTCTGCTCTGGCAGGGAAGGTGCCTGATTGTCTGGAGCACGAAATGGGGT  195
      |||||||||||||| ||| ||| |||| ||||| ||||||||||||||||
seq2  CTCTGCTCTGGCAGAGAA-GTG-CTGA-TGTCT-GAGCACGAAATGGGGT  191

seq1  CTGTCCCAGAAGCTGTGTAGCTTCTGCCTGTCCCAGAAGCTGTTTTGCTT  245
      ||||||||||||||||||||| |||||||||||||||||||| ||||| |
seq2  CTGTCCCAGAAGCTGTGTAGC-TCTGCCTGTCCCAGAAGCTG-TTTGC-T  238

seq1  CTGCATTCCTCTTGCTCACCCTCCGCAGTCTGTGAGCTGATCTGTGCAGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTCCTCTTGCTCACCCTCCGCAGTCTGTGAGCTGATCTGTGCAGA  288

seq1  CTGGTCTCAGAGGGACCTGGGACACAAGATGGCTCCTTCACTTGCTCTGG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTCAGAGGGACCTGGGACACAAGATGGCTCCTTCACTTGCTCTGG  338

seq1  AGGTCAGAGCCCTCCCAGGCAGCCACCTCTCCTCTGGTGGGGAAGGTGCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGAGCCCTCCCAGGCAGCCACCTCTCCTCTGGTGGGGAAGGTGCC  388

seq1  TGGATGTCTGGAGCCCAAATAGGGTTCTGTCCCAGAAGCTGTGCCACTTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTCTGGAGCCCAAATAGGGTTCTGTCCCAGAAGCTGTGCCACTTC  438

seq1  TGCAGTCTGCTTGCTTACCCTCTGCAGTTCCTGAGCTGACCTGTGCAGAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCTGCTTGCTTACCCTCTGCAGTTCCTGAGCTGACCTGTGCAGAC  488

seq1  TTAGTATTTGGGTTCTTTTATTTTCATTTTTTATTAATGCCCCTCAGGAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATTTGGGTTCTTTTATTTTCATTTTTTATTAATGCCCCTCAGGAT  538

seq1  AACACTTCTAGCTCAATTCATTATCATTATAAAATTGTGATTTTTATGTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTCTAGCTCAATTCATTATCATTATAAAATTGTGATTTTTATGTG  588

seq1  ACCTGTTCATTCATACAACTTATTATCTAAGTTTTTATATTTTGCCTTTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTCATTCATACAACTTATTATCTAAGTTTTTATATTTTGCCTTTA  638

seq1  TAGTGAAAGCAAAGCATGTTTGACTTTAGTGGCAGAACTAATAAAAAGTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAAGCAAAGCATGTTTGACTTTAGTGGCAGAACTAATAAAAAGTT  688

seq1  TATTAAATGGCATTTGTGAGCCCATCAATAATAATCTGTTCAGTCAGTAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATGGCATTTGTGAGCCCATCAATAATAATCTGTTCAGTCAGTAA  738

seq1  TTGAACATAGATATAATATTCTTTGCTACATGAATTAATATCTCAGCACA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACATAGATATAATATTCTTTGCTACATGAATTAATATCTCAGCACA  788

seq1  CACCAGTATGTTCCATATATAATATGACAGTGATGAATGATGAAAAAAAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTATGTTCCATATATAATATGACAGTGATGAATGATGAAAAAAAC  838

seq1  ATCAAAATGGGAGAAAATTTTTTATTGATCCAGACCTTTTTACCCTTCTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATGGGAGAAAATTTTTTATTGATCCAGACCTTTTTACCCTTCTC  888

seq1  ATCCAGTTGTGTATGTAATTTATAGTGATATAAACATGAGACTAGGCTGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTTGTGTATGTAATTTATAGTGATATAAACATGAGACTAGGCTGG  938

seq1  CCTCAAAATCAGAGATTCACCTGTCTCTGCCTTCTGAGTGCTGGAACTGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAATCAGAGATTCACCTGTCTCTGCCTTCTGAGTGCTGGAACTGA  988

seq1  AGGCAACTTCCACCCAGCAAAACATGATATCAGTTTAAAGGCTTGTTTAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTTCCACCCAGCAAAACATGATATCAGTTTAAAGGCTTGTTTAG  1038

seq1  GCATTGTACAGATTTTATCTTGTGTTTTTACTTAGTTTGCTAACATGTCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTACAGATTTTATCTTGTGTTTTTACTTAGTTTGCTAACATGTCT  1088

seq1  GGCAGTTTGACTGATGAAGCAGAAGTGCTAACTAACAAAAGGTGACATAT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTTGACTGATGAAGCAGAAGTGCTAACTAACAAAAGGTGACATAT  1138

seq1  TAACACAATCATTTCATGCCTGGAATAGAGGTGACAAGAATTC  1188
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAATCATTTCATGCCTGGAATAGAGGTGACAAGAATTC  1181