BAC Information

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BAC

Clone NameB6Ng01-280G19
Chromosome4 (Build37)
Map Location 73,657,603 - 73,658,746
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667713, LOC100039698, OTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik
Downstream geneFrmd3, LOC100039774, Jmjd2c, LOC100040258, LOC100039814
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280G19.bB6Ng01-280G19.g
ACCGA080154GA080155
length1,1781,151
definitionB6Ng01-280G19.b B6Ng01-280G19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaacaaata
ttccacatccttaatcatcagggaaatgcaaatctaaacaaccctgggat
tccacttcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
caatgctggcaaggatgtggagttagaggaacactcctccattgttggtg
ggattgcaagcttttacaaccactctggaaatcagcctgtcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctccggggc
atctatccagaagatgttccaatcggtaataaggacacatgttccaccat
gttcatattatttataatagccagaagctggaaagaaccaagatgcccct
cagtagaggaatggatacagaaaatgtggtacatttatacaatggagtac
tactcagctattaaaaagaatgaatttacgaaattcctaggcaaatggat
ggacctggagggcatcatcctgagagaggtaacccaaccacaaaagaact
cacacgatatgtactcacagataagtggatattagcccagaaacttagaa
tacccaagatataagatacaactttcaaaacacatgaaactcaagaagaa
tgacgaccaaagtgtagacactttgccccttcttagaattggaaacaaaa
cagccatggaaggagttacagagacaaagtttggagctgagacaaaagga
gggaccatctagagactgccatatccggggatccatcccacaatcagcct
ccaaatgctgacaccattgcatacactggcaagattttgccgaaaggacc
aagatatagctgtctcttgtgagagtatgccggggcctagcaaacacaga
agtgcatgctcagtcacctattggaaggtacacagggcccccaatggagg
agctagagaaagtacccaaggagccaaagggatctgcaatcctataggtg
gaacacaatatgaactaccagtaccccccccccgagctcttgtcttctag
ctgcatatgaatcagaaaatggcctagtggtcatcagtgaaagagagagg
ttcattagtcatgcaactttatgtactcagtacagagaaacaagagggca
aggtgtggcagtggggtggggtgggcag
gaattctctgttgctctccaggaattcattgtcatcccaatgagcccctg
tccctgtgtgaaatgctctaggttcaaggggtgacggagatgttgcagca
gttacaggtaggtagaacttcgagatggagggagaaatgttagaaaatag
gaattaaatgaaagctgctttgctctgttgtttctttttcagtgaggaat
gattgctaccagaaaggcttgttagctgtcagttctttaacgtttgctac
atatgcagtcccttcatccagagggataccctgtgctgtggagggaaaaa
ggctgggaagggattggctgtggctagcagtgcacttggcgttcttcctg
tcctgtgtattccctgcttcctctgcaattccagcactagtaatcaccct
acagtcaggcatctatttctcaatcctctaaactgcaagagcgatcaacc
tactactgccccttgtctgaaacctcagcactagcaatgatgaagctgga
ggagagagtgtgaggccagcctggattgcttagtgagactgtatcaaata
acaaaaggaaaagagagagagagagagagagagagagagagagagaattt
agtataacattgtatcttagtcactcttctattgttaggaagagacagca
tgagaacggcaactcttataaaaggaagcagttaattgtgggtttgcttg
cagtttcagagggtagttgtgatcatcgtgggagcatggagggagcattt
gacagcatgcatggtgcaggagcagtggcaaactacatccctgatctgta
agtagcagagagaaagacagagagagacagagacagagagagacagagac
agatgctgtgcctccctgtcatgctgtggtgaatgagcattcaatgaccc
tatagaaaccattcttaataaactcaacacagttatcatagctgaattag
agattggacatatttatgtattgtttatgttatcccatagaaatagaatc
ctgaatagatcaggatttgagggtcatgggggggaatataatttgtagat
gtcagtgcaattggatatggagcctcagagaccacattctacatctgctc
aggtaagatgggtgtaatagtaccttttcaattactgtggatataacgct
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_73657603_73658746
seq2: B6Ng01-280G19.g_69_1219 (reverse)

seq1  CAGCGTTTTAT-CACAGTAATTGAAAAGTAACTATTACA-CCATCTATAC  48
      ||||||| ||| ||||||||||||||||  ||||||||| |||||| |||
seq2  CAGCGTTATATCCACAGTAATTGAAAAGGTACTATTACACCCATCT-TAC  49

seq1  CTGAGCAGATGTAGGAATGTG---TCTTGGGCT-CATATCCCATTGCACT  94
      ||||||||||||| |||||||   |||  |||| ||||||| ||||||||
seq2  CTGAGCAGATGTA-GAATGTGGTCTCTGAGGCTCCATATCCAATTGCACT  98

seq1  GACATCTACAATTTATAT--CACCCCATGACCCTCAAAT-CTGATCTA-T  140
      ||||||||||| ||||||  | ||||||||||||||||| |||||||| |
seq2  GACATCTACAAATTATATTCCCCCCCATGACCCTCAAATCCTGATCTATT  148

seq1  CA-GATTCTA-TTCTATGGGATAACATAAACAATTACAT-AATATGTCAA  187
      || ||||||| |||||||||||||||||||||| ||||| |||||||| |
seq2  CAGGATTCTATTTCTATGGGATAACATAAACAA-TACATAAATATGTCCA  197

seq1  ATCTCTAATTCAGCTATGATAACTTGTGTTGAGTTTTTATTAAGAATGGT  237
      ||||||||||||||||||||||| |||||||||  |||||||||||||||
seq2  ATCTCTAATTCAGCTATGATAAC-TGTGTTGAG--TTTATTAAGAATGGT  244

seq1  TTCTATAGGGTCATTTGAATGCTCATTCACCACAGCATGACAGGGAGGCA  287
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCTATAGGGTCA-TTGAATGCTCATTCACCACAGCATGACAGGGAGGCA  293

seq1  CAGCATCTGTCTCTGTCTCTCTCTGTCTCTGTCTCTCTCTGTCTTTCTCT  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCTGTCTCTGTCTCTCTCTGTCTCTGTCTCTCTCTGTCTTTCTCT  343

seq1  CTGCTACTTACAGATCA-GGATGTAGTTTGCCACTGCTCCTGCACCATGC  386
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTGCTACTTACAGATCAGGGATGTAGTTTGCCACTGCTCCTGCACCATGC  393

seq1  ATGCTGTCAAATGCTCCCTCCATGCTCCCACGATGATCACAACTACCCTC  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTCAAATGCTCCCTCCATGCTCCCACGATGATCACAACTACCCTC  443

seq1  TGAAACTGCAAGCAAACCCACAATTAACTGCTTCCTTTTATAAGAGTTGC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTGCAAGCAAACCCACAATTAACTGCTTCCTTTTATAAGAGTTGC  493

seq1  CGTTCTCATGCTGTCTCTTCCTAACAATAGAAGAGTGACTAAGATACAAT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTCATGCTGTCTCTTCCTAACAATAGAAGAGTGACTAAGATACAAT  543

seq1  GTTATACTAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATACTAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTT  593

seq1  CCTTTTGTTATTTGATACAGTCTCACTAAGCAATCCAGGCTGGCCTCACA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGTTATTTGATACAGTCTCACTAAGCAATCCAGGCTGGCCTCACA  643

seq1  CTCTCTCCTCCAGCTTCATCATTGCTAGTGCTGAGGTTTCAGACAAGGGG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCTCCAGCTTCATCATTGCTAGTGCTGAGGTTTCAGACAAGGGG  693

seq1  CAGTAGTAGGTTGATCGCTCTTGCAGTTTAGAGGATTGAGAAATAGATGC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTAGGTTGATCGCTCTTGCAGTTTAGAGGATTGAGAAATAGATGC  743

seq1  CTGACTGTAGGGTGATTACTAGTGCTGGAATTGCAGAGGAAGCAGGGAAT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGTAGGGTGATTACTAGTGCTGGAATTGCAGAGGAAGCAGGGAAT  793

seq1  ACACAGGACAGGAAGAACGCCAAGTGCACTGCTAGCCACAGCCAATCCCT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGACAGGAAGAACGCCAAGTGCACTGCTAGCCACAGCCAATCCCT  843

seq1  TCCCAGCCTTTTTCCCTCCACAGCACAGGGTATCCCTCTGGATGAAGGGA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCCTTTTTCCCTCCACAGCACAGGGTATCCCTCTGGATGAAGGGA  893

seq1  CTGCATATGTAGCAAACGTTAAAGAACTGACAGCTAACAAGCCTTTCTGG  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATATGTAGCAAACGTTAAAGAACTGACAGCTAACAAGCCTTTCTGG  943

seq1  TAGCAATCATTCCTCACTGAAAAAGAAACAACAGAGCAAAGCAGCTTTCA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATCATTCCTCACTGAAAAAGAAACAACAGAGCAAAGCAGCTTTCA  993

seq1  TTTAATTCCTATTTTCTAACATTTCTCCCTCCATCTCGAAGTTCTACCTA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTCCTATTTTCTAACATTTCTCCCTCCATCTCGAAGTTCTACCTA  1043

seq1  CCTGTAACTGCTGCAACATCTCCGTCACCCCTTGAACCTAGAGCATTTCA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAACTGCTGCAACATCTCCGTCACCCCTTGAACCTAGAGCATTTCA  1093

seq1  CACAGGGACAGGGGCTCATTGGGATGACAATGAATTCCTGGAGAGCAACA  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGACAGGGGCTCATTGGGATGACAATGAATTCCTGGAGAGCAACA  1143

seq1  GAGAATTC  1144
      ||||||||
seq2  GAGAATTC  1151