BAC Information

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BAC

Clone NameB6Ng01-283M05
Chromosome4 (Build37)
Map Location 76,738,943 - 76,739,513
singlet/doubletsinglet
Overlap genenone
Upstream genePtprd, LOC667858, LOC667862
Downstream geneLOC100039974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283M05.bB6Ng01-283M05.g
ACCGA082639GA082640
length1,201567
definitionB6Ng01-283M05.b B6Ng01-283M05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggaaaatactttcggcattatgctggatgtggacatgtttcc
ctccaaaagatttgcaggatgtgtgaagaagatgttgtcagttggataga
taccaagtgaatgtggatagcgcagccaaaacttcacagcccaatccatt
taccttttgaagtatttcatattcaacatgtggtcatgccttatcatgga
gatgagttagggcctttccattgatcaatgctggctttaggcattgccat
ttttactgtagctcatcaataattctcaaatataacagtgttgacaacat
tacaacgctgctaaagtggaacagaccaacaaactgttggcatgacaatt
tttggtacaagtggagctttggaaagtgctttggagcttctactttgccc
aaccaagtcagtcatcatttgtcactatacaatcctcttgtcacttcaca
ttgcaatatgatcagcaaaggtttcattattgtgtagaataagaaagaac
tacaaatttatttaattatattttgattctttgtcatgaaagaagtttaa
gaggcactcactgtatagtttttttctcttttacaatttttttcaaatgg
caaattacatctgaatgtctacaatatttggatatttcatgtagttgtaa
gaggactgcatgtgaatgctctcagttgttcaatgtcatttcctgatagc
tggctactgtgcttttcatcttagatgcttttgtcttctctacaaaactt
ccatactcactctctgtttgtgtattgctaatattgcatgttgtccctaa
tactttacaacatataaaattgaatagaaaaattgcttaaatcagccttt
ttcttctagcatcattttcatggaataagacaaatataaaatgaatagca
aatagttgtttattagcaaaaattgactcatgtgcattaaaataatggat
atcctaacaatatttatataaaaatatattacagtactaaataccactag
ttgagctaaggaatcagaaaaaaaaaatgggtaataaaatgcagtatggg
atgtgctttgaatttttttggtcaatcataaaaatagctttgtcattttg
agggaggtttggttccaacttgcaggtaattaatttaggcaattcaggca
ggcttagaagaatccccatgccgttttctcagtgtggccaagtgccccta
g
cagggccaggaagcaggagtgggtgggttggggagcagggcgggaggagg
gtataggggactttcaggatagcatttgaaatgtaagtgaagaaaatatc
taataaaaaaagaaaaagaaagtcccagaaacataaagattaagtctgtg
agagaatttaagtcaaggttataaacttggagtttacttggagcttttgt
cagacttgataatcatatcagcacaatattcttcagagtctttcttcttc
tctaagtgtacagtatttttaaagtgacatattttctcttattctttcta
tcacaggcaatttaagtggcatgaaggtagggaaatagagacatgcatac
atagagacagagaaatatatagcctatgatgtctgaaagaaaactatttt
aagtttgcacaattataaaaatgtattgggataaattttggtatcctgct
acagctctcactctgaaatattatgttgttgatttgagcaacaagatgct
atataaacagaataatgagcattggcatgctgaatcattgaataatttac
aaataggaaagcaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_76738943_76739513
seq2: B6Ng01-283M05.g_68_640

seq1  GAATTCCAGGGCCAGGAAGCAGGAGTGGGTGGGTTGGGGAGCAGGGCGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCCAGGAAGCAGGAGTGGGTGGGTTGGGGAGCAGGGCGGG  50

seq1  AGGAGGGTATAGGGGACTTTCAGGATAGCATTTGAAATGTAAGTGAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGTATAGGGGACTTTCAGGATAGCATTTGAAATGTAAGTGAAGAA  100

seq1  AATATCTAATAAAAAAAGAAAAAGAAAGTCCCAGAAACATAAAGATTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTAATAAAAAAAGAAAAAGAAAGTCCCAGAAACATAAAGATTAAG  150

seq1  TCTGTGAGAGAATTTAAGTCAAGGTTATAAACTTGGAGTTTACTTGGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAGAGAATTTAAGTCAAGGTTATAAACTTGGAGTTTACTTGGAGC  200

seq1  TTTTGTCAGACTTGATAATCATATCAGCACAATATTCTTCAGAGTCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCAGACTTGATAATCATATCAGCACAATATTCTTCAGAGTCTTTC  250

seq1  TTCTTCTCTAAGTGTACAGTATTTTTAAAGTGACATATTTTCTCTTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCTAAGTGTACAGTATTTTTAAAGTGACATATTTTCTCTTATTC  300

seq1  TTTCTATCACAGGCAATTTAAGTGGCATGAAGGTAGGGAAATAGAGACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATCACAGGCAATTTAAGTGGCATGAAGGTAGGGAAATAGAGACAT  350

seq1  GCAAACATAGAGACAGAGAAATATATAGCCTATGATGTCTGAAAGAAAAC  400
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACATAGAGACAGAGAAATATATAGCCTATGATGTCTGAAAGAAAAC  400

seq1  TATTTTAAGTTTGCACAATTATAAAAATGTATTGGGATAAATTTTGGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAGTTTGCACAATTATAAAAATGTATTGGGATAAATTTTGGTAT  450

seq1  CCTGCTACAGCTCTCACTCTGAAATATTATGTTGTTGATTTGAGCAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTACAGCTCTCACTCTGAAATATTATGTTGTTGATTTGAGCAACAA  500

seq1  GATGCTATATAAACAGAATAATGAGCATTGGCATGCTGAATCATTGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTATATAAACAGAATAATGAGCATTGGCATGCTGAATCATTGAATA  550

seq1  A-TTACAAATAGG-AAGCAATCT  571
      | ||||||||||| |||||||||
seq2  ATTTACAAATAGGAAAGCAATCT  573