BAC Information

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BAC

Clone NameB6Ng01-283M12
Chromosome4 (Build37)
Map Location 103,894,770 - 103,895,903
singlet/doubletsinglet
Overlap genenone
Upstream gene4921539E11Rik, 4930456L15Rik, Oma1, LOC665451, LOC100039940, EG665460, LOC622315
Downstream geneDab1, C8b, C8a, 1700024P16Rik, Prkaa2, LOC100039513, Ppap2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283M12.bB6Ng01-283M12.g
ACCGA082653GA082654
length1,1201,009
definitionB6Ng01-283M12.b B6Ng01-283M12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctggcctcgaactcagaaatccacctgcc
tctgcctcctgagtgctgggattaaaggcttgagccaccactgcctggag
ggaactgtttttatagttgtcctggctaaaatttttcctgaactttctat
gagagagcttgagcttttcattttctttattagaaagaaggtctttaagt
atcaaacacaccctttatatcttaaaaataacaaacaaatatgctttctg
agtatattgtaagtattttccctaggctactatatgtcatttagtttcat
ttatattgtatcaaatctgttgatttctttcattctagtttgccctttta
aaatggtacatttgatgtcctagaaaaggcaagacgtgtactttgacgca
gttttatttgaaatctatttgagaataaaactacaagtacttaacatccc
agtaactctattagtcatccattgttcctgccactttaaaaaagtcctat
ttgtcatatcctaagatgttataaggtctggcctctcagttctgcttcgt
tgctatgtctttgtgacatgagaggtattggttttcctcctaggcagtat
ccattgcttccaaaagttacatgtatgcgaaaatgaggccgtagactgta
gtaattgtcaagccagaaaggactccctgaatgtgcactgtctcattccc
taatgtaagcagataagaagtgttcacttctccttgatgcaacttaatga
tgataagactttcatcttctttgtattcatgatactgattctccagtatt
tactgaaatatcattaatcattttaatcacaataaactcatgctcataac
gtggatgtcctaagagtttagatagcagtttcattttcatttcccaataa
ttaactttaccttatttttatatcattatcaggctgagaataaaaccttg
cagagacctaaagaacacagattcctttgtagagagcctgtgggcagaga
gcagactgctgatcagatgtttcctaagtctgatgcagctgtggctgctc
tgtcatgaaagctggcgctgcgccacggatgggcactaaaataactggaa
aggcctcacaatgtggcagc
gaattcaaacacagcaagaattggtagtggattttgtccaaaagccaagc
aaagggagcatcaaagacaatgtcctttaaggatccttgatctttagagg
aatctagttgataaatctgggacaggcaggtgaagtcatcttgaagtggg
gtgctgggtcccacactcaagaggcctggggaagagaaatacaccttgaa
agtagcagggtaaatgggtaccaggatgagatcaggactaagccgtacga
cctttgatgctcaagagagaccaatgagagcgcagacccctgtaccctgt
tcacagtctcgcttcctccagccatgctgacttatggctactcaaacaaa
tcaaaaccttattctccacagagacacatagggcagtcagtgtgcacggg
gtcctttctggcctcgtgtgaccccacacacaacaaacagaaaatatacg
gagctatttgttgggttaaccaagtggtcagagtgtcttttctttaagct
tgtgttatatgtgacagactccttcctatctgcacctactgttttcattc
cagagacatcaagcatcagctgataataagatgggggggggggagcaagg
agaaaggaggggattgccctctgctggctgaacactcaaaaaatctagaa
tgggaaacagagggtttaggttcgggggaccttaattcaattgaatatgc
atgaaatctcctactagagttgcttgctcacagcaggattttttgtgatt
tgtcaatcgtgtctctataacatcacaatcttaaatgcatatcccgaaat
aggaaaaacaactccctttgcgctgctctgtttcaaattagaaatgagga
cattaagtttagagtgcactctctaaacaacatgctcgtcctttaccagt
gggaatgatcgagatgaatccttcagcacccagtgtaaggtgggtaagaa
tactcaaattttctgcattatatatttaggctgtgtgtggagtaacgctc
gtatcccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_103894770_103895903
seq2: B6Ng01-283M12.b_45_1164

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCC  50

seq1  TCTGCCTCCTGAGTGCTGGGATTAAAGGCTTGAGCCACCACTGCCTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCTGAGTGCTGGGATTAAAGGCTTGAGCCACCACTGCCTGGAG  100

seq1  GGAACTGTTTTTATAGTTGTCCTGGCTAAAATTTTTCCTGAACTTTCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGTTTTTATAGTTGTCCTGGCTAAAATTTTTCCTGAACTTTCTAT  150

seq1  GAGAGAGCTTGAGCTTTTCATTTTCTTTATTAGAAAGAAGGTCTTTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGCTTGAGCTTTTCATTTTCTTTATTAGAAAGAAGGTCTTTAAGT  200

seq1  ATCAAACACACCCTTTATATCTTAAAAATAACAAACAAATATGCTTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACACACCCTTTATATCTTAAAAATAACAAACAAATATGCTTTCTG  250

seq1  AGTATATTGTAAGTATTTTCCCTAGGCTACTATATGTCATTTAGTTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATTGTAAGTATTTTCCCTAGGCTACTATATGTCATTTAGTTTCAT  300

seq1  TTATATTGTATCAAATCTGTTGATTTCTTTCATTCTAGTTTGCCCTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTGTATCAAATCTGTTGATTTCTTTCATTCTAGTTTGCCCTTTTA  350

seq1  AAATGGTACATTTGATGTCCTAGAAAAGGCAAGACGTGTACTTTGACGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTACATTTGATGTCCTAGAAAAGGCAAGACGTGTACTTTGACGCA  400

seq1  GTTTTATTTGAAATCTATTTGAGAATAAAACTACAAGTACTTAACATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTTGAAATCTATTTGAGAATAAAACTACAAGTACTTAACATCCC  450

seq1  AGTAACTCTATTAGTCATCCATTGTTCCTGCCACTTTAAAAAAGTCCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTCTATTAGTCATCCATTGTTCCTGCCACTTTAAAAAAGTCCTAT  500

seq1  TTGTCATATCCTAAGATGTTATAAGGTCTGGCCTCTCAGTTCTGCTTCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATATCCTAAGATGTTATAAGGTCTGGCCTCTCAGTTCTGCTTCGT  550

seq1  TGCTATGTCTTTGTGACATGAGAGGTATTGGTTTTCCTCCTAGGCAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGTCTTTGTGACATGAGAGGTATTGGTTTTCCTCCTAGGCAGTAT  600

seq1  CCATTGCTTCCAAAAGTTACATGTATGCGAAAATGAGGCCGTAGACTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCTTCCAAAAGTTACATGTATGCGAAAATGAGGCCGTAGACTGTA  650

seq1  GTAATTGTCAAGCCAGAAAGGACTCCCTGAATGTGCACTGTCTCATTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGTCAAGCCAGAAAGGACTCCCTGAATGTGCACTGTCTCATTCCC  700

seq1  TAATGTAAGCAGATAAGAAGTGTTCACTTCTCCTTGATGCAACTTAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTAAGCAGATAAGAAGTGTTCACTTCTCCTTGATGCAACTTAATGA  750

seq1  TGATAAGACTTTCATCTTCTTTGTATTCATGATACTGATTCTCCAGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGACTTTCATCTTCTTTGTATTCATGATACTGATTCTCCAGTATT  800

seq1  TACTGAAATATCATTAATCATTTTAATCACAATAAACTCATGCTCATAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAATATCATTAATCATTTTAATCACAATAAACTCATGCTCATAAC  850

seq1  GTGGATGTCCTAAGAGTTTAGATAGCAGTTTCATTTTCATTTCCCAATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGTCCTAAGAGTTTAGATAGCAGTTTCATTTTCATTTCCCAATAA  900

seq1  TTAACTTTACCTTATTTTTATATCATTATCAGGGCTGAGAATAAAACCTT  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTAACTTTACCTTATTTTTATATCATTATCA-GGCTGAGAATAAAACCTT  949

seq1  GCAGAGGAACCTAAAGAACACAGGATTCCTTTGTAAGGAGAGGCCTGTGG  1000
      ||||||  |||||||||||||| ||||||||||||  |||| ||||||||
seq2  GCAGAG--ACCTAAAGAACACA-GATTCCTTTGTA--GAGA-GCCTGTGG  993

seq1  GCAGAGGAGCAGACTGGCTGAATCCAGATGTTTCCTAAGGTCTGATGCAG  1050
      ||||| ||||||||| |||||   |||||||||||||| |||||||||||
seq2  GCAGA-GAGCAGACT-GCTGA--TCAGATGTTTCCTAA-GTCTGATGCAG  1038

seq1  CTGTGGGCTGCTCTGTCCATGGAAAGCTGGCGCTGCG-CACAGATGGGCA  1099
      |||| ||||||||||| ||| |||||||||||||||| ||| ||||||| 
seq2  CTGT-GGCTGCTCTGT-CAT-GAAAGCTGGCGCTGCGCCACGGATGGGC-  1084

seq1  AACTAAAATAACCTGAAA-GCCTCAC-ATGTGGCAGC  1134
       |||||||||||  |||| ||||||| ||||||||||
seq2  -ACTAAAATAACTGGAAAGGCCTCACAATGTGGCAGC  1120