BAC Information

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BAC

Clone NameB6Ng01-284L09
Chromosome4 (Build37)
Map Location 85,875,956 - 86,011,507
singlet/doubletdoublet
Overlap geneAdamtsl1
Upstream geneSh3gl2, A930009N24, LOC668052
Downstream gene4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284L09.bB6Ng01-284L09.g
ACCGA083345GA083346
length8281,076
definitionB6Ng01-284L09.b B6Ng01-284L09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,875,956 - 85,876,782)(86,010,426 - 86,011,507)
sequence
gaattcctagagcagactggctatctaggctgacaaatcaccaagctctg
gagttgattgacaccttgagaaggatgtgatacaggagcaattgaggatg
gttctaggtatcaatatggagcctccacatgcaagtatacacacacacag
acacacacacacagacacacacacacagacacacacacacacacacacac
acacacacaccacaagaaagggagagaggaaaggaaggaggaagagagag
agagggagaaagagagagagagagagagagagagagagagagagagagag
agagagagagagctggggaaaaggaaagaaagctcccaattataatattg
ttttatgagaataaatttctatagattcatgagtcatgcagaaaacaaaa
caaacttcaatgaaaggtcatctaatgtaatatttttttctttttaaaat
gtaaaccatacctttcataaaacagcaattcaactgcatgtaccctatta
tccttttcacacagaattgctatgacagtataatttcagtaaccttgaca
atgacttactatttaaataaagcaattagtgtttcattctatttcgtacc
acactgggccttatttttctcacatgtaagagtacagctatccgtggttt
tccagtgtcaagcctctgttcataggaagtcttcgcaggaagcctgagta
taagcaaaagtccccttgttgtgtgtaaaggggtgtagggtcttttcttt
cactccatggaccactcttatgatctctgagaaataagctgtcacacaca
cacacgcaccacacacatacacacacac
gaattcctggaagcaggcgtgggaatcacccaagctttagaaaggacacc
aaggataaagttgcttagaaattttggacccaaatttagtggttggcaga
attttacaaggatactggtcagattaggatttctgggttatattcataag
taaggaagagtaaaaatgaatgataatttattatcactggcacccacagt
ggcataggcatgaggaaggacaggttatgagcagagtgaatatctgggtt
ctatcattacatagtcacacaaactttgttcagttatacaattgctgtat
atctctattttctacgtaggtagttgctgaaagtgttaggtaagaaacag
gccttagatcaagaatgtccttgtattttgtgaggtttctataagggcta
aagttaactggtaagcaccgcgtgcccaaggacagataacttcctggaat
gatcaggaccactcttcatgtaagataacaagtctcatgttgttcttact
tcagtaaacaaggtttacttactccctgacgcagattgtttctagctgaa
cattgagaatctaaactcaaacaaggttggttgctccaactgcacaggat
gtacttggtcacacataggcaggatgaatgcttacacccgattggacgaa
ggcaggaagtactgtagactgtagcctttatgagtacctgattaaccgaa
ttcagtgccattctctgggaattctgggcatggacttgatcagggtccaa
ctcccttgccagtacttaataaagcttgccttgatgggatgattacggat
ttggcctttctcctcagcattttcaggtttaacagtttcaacactaataa
ccaccctcagcagaatctctggcacaatacagatggtgccctgtgagaag
gaggtgctggagacttttgggtacacacatagaggggcacaaaagcttaa
caggttgaaggaataaagaggagaaaaggcgaaagaggcgagagagggta
tgagaggagaggaacacagtcgtagtagtataaagagaagggagtactct
tgtactgaagagatgaaactgcttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_85875956_85876782
seq2: B6Ng01-284L09.b_47_874

seq1  GAATTCCTAGAGCAGACTGGCTATCTAGGCTGACAAATCACCAAGCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGAGCAGACTGGCTATCTAGGCTGACAAATCACCAAGCTCTG  50

seq1  GAGTTGATTGACACCTTGAGAAGGATGTGATACAGGAGCAATTGAGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGATTGACACCTTGAGAAGGATGTGATACAGGAGCAATTGAGGATG  100

seq1  GTTCTAGGTATCAATATGGAGCCTCCACATGCAAGTATACACACACACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGGTATCAATATGGAGCCTCCACATGCAAGTATACACACACACAG  150

seq1  ACACACACACACAGACACACACACACAGACACACACACACACACACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACAGACACACACACACAGACACACACACACACACACACAC  200

seq1  ACACACACACCACAAGAAAGGGAGAGAGGAAAGGAAGGAGGAAGAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACCACAAGAAAGGGAGAGAGGAAAGGAAGGAGGAAGAGAGAG  250

seq1  AGAGGGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  300

seq1  AGAGAGAGAGAGCTGGGGAAAAGGAAAGAAAGCTCCCAATTATAATATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGCTGGGGAAAAGGAAAGAAAGCTCCCAATTATAATATTG  350

seq1  TTTTATGAGAATAAATTTCTATAGATTCATGAGTCATGCAGAAAACAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGAGAATAAATTTCTATAGATTCATGAGTCATGCAGAAAACAAAA  400

seq1  CAAACTTCAATGAAAGGTCATCTAATGTAATATTTTTTTCTTTTTAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTCAATGAAAGGTCATCTAATGTAATATTTTTTTCTTTTTAAAAT  450

seq1  GTAAACCATACCTTTCATAAAACAGCAATTCAACTGCATGTACCCTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCATACCTTTCATAAAACAGCAATTCAACTGCATGTACCCTATTA  500

seq1  TCCTTTTCACACAGAATTGCTATGACAGTATAATTTCAGTAACCTTGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCACACAGAATTGCTATGACAGTATAATTTCAGTAACCTTGACA  550

seq1  ATGACTTACTATTTAAATAAAGCAATTAGTGTTTCATTCTATTTCGTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTACTATTTAAATAAAGCAATTAGTGTTTCATTCTATTTCGTACC  600

seq1  ACACTGGGCCTTATTTTTCTCACATGTAAGAGTACAGCTATCCGTGGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGGCCTTATTTTTCTCACATGTAAGAGTACAGCTATCCGTGGTTT  650

seq1  TCCAGTGTCAAGCCTCTGTTCATAGGAAGTCTTCGCAGGAAGCCTGAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGTCAAGCCTCTGTTCATAGGAAGTCTTCGCAGGAAGCCTGAGTA  700

seq1  TAAGCAAAAGTCCCCTTGTTGTGTGT-AAGGGGTGTAGGGTC-TTTCTTT  748
      |||||||||||||||||||||||||| ||||||||||||||| |||||||
seq2  TAAGCAAAAGTCCCCTTGTTGTGTGTAAAGGGGTGTAGGGTCTTTTCTTT  750

seq1  CACTCCATGGACCACTCTTATGATCTCTGAGAAATAAGCTGTCACACACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCATGGACCACTCTTATGATCTCTGAGAAATAAGCTGTCACACACA  800

seq1  CACACGCACACACACACACACACACACAC  827
      ||||||||| |||||||| ||||||||||
seq2  CACACGCAC-CACACACATACACACACAC  828

seq1: chr4_86010426_86011507
seq2: B6Ng01-284L09.g_68_1143 (reverse)

seq1  AGAAGCAGTTTCATCTCTTCAGTAACAGAGTTCTCCCTTCTC-TTATACT  49
      ||||||||||||||||||||||||  ||||| |||||||||| |||||||
seq2  AGAAGCAGTTTCATCTCTTCAGTACAAGAGTACTCCCTTCTCTTTATACT  50

seq1  ACTACGACTGTTGCTCCTTCTTCCTCCTCATTCCCCTCCTCCTCCGCCTC  99
      |||||||||| || ||||   |||| ||||| |    ||||   ||||||
seq2  ACTACGACTG-TGTTCCT--CTCCT-CTCATAC----CCTCTCTCGCCTC  92

seq1  TTTCGCCTTTTTCTCCTCTTTATTCC-TCACCCTGTTAAGCTTTTGTGCC  148
      ||||||| |||||||||||||||||| ||| |||||||||||||||||||
seq2  TTTCGCC-TTTTCTCCTCTTTATTCCTTCAACCTGTTAAGCTTTTGTGCC  141

seq1  CCTCTATGTGTTGTA-CCAAAAGTCTCCAGCACCT-CTTCTCACAGGGCA  196
      |||||||||| |||| ||||||||||||||||||| ||||||||||||||
seq2  CCTCTATGTG-TGTACCCAAAAGTCTCCAGCACCTCCTTCTCACAGGGCA  190

seq1  CCATCTGTATTGTGCCAGAGATTCTGCTGAGGGTGGTTATTAGTGTTGAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGTATTGTGCCAGAGATTCTGCTGAGGGTGGTTATTAGTGTTGAA  240

seq1  ACTGTTAAACCTGAAAATGCTGAGGAGAAAGGCCAAATCCGTAATCATCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAAACCTGAAAATGCTGAGGAGAAAGGCCAAATCCGTAATCATCC  290

seq1  CATCAAGGCAAGCTTTATTAAGTACTGGCAAGGGAGTTGGACCCTGATCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGGCAAGCTTTATTAAGTACTGGCAAGGGAGTTGGACCCTGATCA  340

seq1  AGTCCATGCCCAGAATTCCCAGAGAATGGCACTGAATTCGGTTAATCAGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATGCCCAGAATTCCCAGAGAATGGCACTGAATTCGGTTAATCAGG  390

seq1  TACTCATAAAGGCTACAGTCTACAGTACTTCCTGCCTTCGTCCAATCGGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATAAAGGCTACAGTCTACAGTACTTCCTGCCTTCGTCCAATCGGG  440

seq1  TGTAAGCATTCATCCTGCCTATGTGTGACCAAGTACATCCTGTGCAGTTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCATTCATCCTGCCTATGTGTGACCAAGTACATCCTGTGCAGTTG  490

seq1  GAGCAACCAACCTTGTTTGAGTTTAGATTCTCAATGTTCAGCTAGAAACA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACCAACCTTGTTTGAGTTTAGATTCTCAATGTTCAGCTAGAAACA  540

seq1  ATCTGCGTCAGGGAGTAAGTAAACCTTGTTTACTGAAGTAAGAACAACAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCGTCAGGGAGTAAGTAAACCTTGTTTACTGAAGTAAGAACAACAT  590

seq1  GAGACTTGTTATCTTACATGAAGAGTGGTCCTGATCATTCCAGGAAGTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTGTTATCTTACATGAAGAGTGGTCCTGATCATTCCAGGAAGTTA  640

seq1  TCTGTCCTTGGGCACGCGGTGCTTACCAGTTAACTTTAGCCCTTATAGAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTTGGGCACGCGGTGCTTACCAGTTAACTTTAGCCCTTATAGAA  690

seq1  ACCTCACAAAATACAAGGACATTCTTGATCTAAGGCCTGTTTCTTACCTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACAAAATACAAGGACATTCTTGATCTAAGGCCTGTTTCTTACCTA  740

seq1  ACACTTTCAGCAACTACCTACGTAGAAAATAGAGATATACAGCAATTGTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTCAGCAACTACCTACGTAGAAAATAGAGATATACAGCAATTGTA  790

seq1  TAACTGAACAAAGTTTGTGTGACTATGTAATGATAGAACCCAGATATTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAACAAAGTTTGTGTGACTATGTAATGATAGAACCCAGATATTCA  840

seq1  CTCTGCTCATAACCTGTCCTTCCTCATGCCTATGCCACTGTGGGTGCCAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTCATAACCTGTCCTTCCTCATGCCTATGCCACTGTGGGTGCCAG  890

seq1  TGATAATAAATTATCATTCATTTTTACTCTTCCTTACTTATGAATATAAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATAAATTATCATTCATTTTTACTCTTCCTTACTTATGAATATAAC  940

seq1  CCAGAAATCCTAATCTGACCAGTATCCTTGTAAAATTCTGCCAACCACTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATCCTAATCTGACCAGTATCCTTGTAAAATTCTGCCAACCACTA  990

seq1  AATTTGGGTCCAAAATTTCTAAGCAACTTTATCCTTGGTGTCCTTTCTAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGGTCCAAAATTTCTAAGCAACTTTATCCTTGGTGTCCTTTCTAA  1040

seq1  AGCTTGGGTGATTCCCACGCCTGCTTCCAGGAATTC  1082
      ||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGGTGATTCCCACGCCTGCTTCCAGGAATTC  1076