BAC Information

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BAC

Clone NameB6Ng01-284M14
Chromosome4 (Build37)
Map Location 78,660,560 - 78,661,703
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039974, LOC100039996
Downstream geneLOC100040026, LOC100040036, LOC667922
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284M14.bB6Ng01-284M14.g
ACCGA083403GA083404
length1,1591,143
definitionB6Ng01-284M14.b B6Ng01-284M14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgcttggcttatatttgtaattctcactaaagaatactccca
gtttaaatcaagacaggctgttttgactgtttataatgttttgttttgca
gttttacctggacatgtggctctctttctttcattgttagtcactcatga
taatttggcttttcttttatttaggcagtgcaaaggataaatgacccgaa
tgataccagttaaaactatttgaggaactgtttcattggagcagggaaag
aaagctccctaactgtgggtattgagtttgtcaagtgtttgctgctgtgg
catacagtggtggcaagaagtagagtgaaaaggaccaactcacccattaa
aggtagcactggaagaaagtaggtttcagggccatgtatctgagtaaggc
ctctgggtacagatagttgaggaatagttgagaatgcttagtgtgatggg
gagggtttaataagactaacccagcatgggtgtctcagggagaaagcaga
ttctatggatgtagtctgggaacaggcttggggcatttcaagcaatggat
atgggtggcaaagggaagaagtgtcttctagcaaaagggcttcacaaatt
aagagggttcttggctataggtctgaaattagtcttgcagatttttacat
ggaggtgagttgatgaaagaggaggcaaaggaaagaaataactgacccag
gaaagttggcttgcacacaaggtgggttcctgggtgattgtttctggatc
tagttcaggatatgtgacttgcacacagagtagttccacaggctttgaga
ctaaaattaggcttcttggttaccactgaccctttctgtcccttcttccc
tacctttcttgcttcctttcttactcattttattctttcccttttccttt
ttaaaatttgaaacagctataggaagacattaaaatttatgcagtgttta
gcatatgaaagtgtttgaacttctagtcttccttaaaaaaatacagatct
gagagtaaagtagtaaaaattcataataaaatattattgtaaaagatatt
gtaatgcagtattcttttaaattaatttttaaagcaacaattgggttgat
ccaattattctgtttcatagtgaagtttttattattaaagatctcagtta
tataaaata

gaattctattggaatttccaaaattaaattcatcatgtgaaatcaacttc
aaaaagttgaagagaattgagttctattaaattccttggtagaggaagga
ggcatcttatgacattcaagagacctaggatgggggaggctcctgagagc
ttatggaagtgactctagttgacatttctagcagtggcagataaggatat
tggaggggccacctcttgtagtcactggagagataaagacgccaacccat
ccacaaaaccttcaatacaaaatgtgttctgcatacaaaaagtacaggga
caaagatggagcatagacagaagaaatgaccaaccaaaggccagcccaac
ttgaaacccaccctttaggcaagtactgacacgattagtgttaatctgta
gtggttacagattggaacctagcataactatcctctaagaagattcaccc
agctgccagtggaaacagatccagagatacacaatcaaacattacaagga
gctgagagaatttgaaggaagagttgggggaaggattaaggaacacagag
ggaataggaactacacaggaagacggagagtgtccctatcccattgagga
tcccagagtcttaaccagcaaagagcatatataagcttgtcctacaaccc
cacactctatacctccatccttcatgctgcaaatacatagcagatgccca
gctttttcttcataccggtactccaacaactgaggcaggagctgaacatg
aatctgttgcctgcttgtaaatcctgctgccataaatgtgctgcattcct
tgacatcactgggagaggatgtgcctggttctagagtgacttgatgtgcc
agggtgggtctgtaaccaggggagccctccctcttctcagaggagagaag
aaggggagttacggggaggggcttatgcaagttggggtttaggaggagga
gggggcagctatgtcaggatgtaaatgaatgaactgaactaaataataat
aataatcaattaactgaattcagagacagtatttatctgaagttcgcact
gtctagatttggtcgagtcacctggatctattaggcagatcaggatacag
tcagtggctaatcatagaggaagatcttgtcctgtggccacga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_78660560_78661703
seq2: B6Ng01-284M14.b_47_1205

seq1  GAATTCTATGCTTGGCTTATATTTGTAATTCTCACTAAAGAATACTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGCTTGGCTTATATTTGTAATTCTCACTAAAGAATACTCCCA  50

seq1  GTTTAAATCAAGACAGGCTGTTTTGACTGTTTATAATGTTTTGTTTTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAATCAAGACAGGCTGTTTTGACTGTTTATAATGTTTTGTTTTGCA  100

seq1  GTTTTACCTGGACATGTGGCTCTCTTTCTTTCATTGTTAGTCACTCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACCTGGACATGTGGCTCTCTTTCTTTCATTGTTAGTCACTCATGA  150

seq1  TAATTTGGCTTTTCTTTTATTTAGGCAGTGCAAAGGATAAATGACCCGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGGCTTTTCTTTTATTTAGGCAGTGCAAAGGATAAATGACCCGAA  200

seq1  TGATACCAGTTAAAACTATTTGAGGAACTGTTTCATTGGAGCAGGGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCAGTTAAAACTATTTGAGGAACTGTTTCATTGGAGCAGGGAAAG  250

seq1  AAAGCTCCCTAACTGTGGGTATTGAGTTTGTCAAGTGTTTGCTGCTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCCCTAACTGTGGGTATTGAGTTTGTCAAGTGTTTGCTGCTGTGG  300

seq1  CATACAGTGGTGGCAAGAAGTAGAGTGAAAAGGACCAACTCACCCATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGTGGTGGCAAGAAGTAGAGTGAAAAGGACCAACTCACCCATTAA  350

seq1  AGGTAGCACTGGAAGAAAGTAGGTTTCAGGGCCATGTATCTGAGTAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGCACTGGAAGAAAGTAGGTTTCAGGGCCATGTATCTGAGTAAGGC  400

seq1  CTCTGGGTACAGATAGTTGAGGAATAGTTGAGAATGCTTAGTGTGATGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGTACAGATAGTTGAGGAATAGTTGAGAATGCTTAGTGTGATGGG  450

seq1  GAGGGTTTAATAAGACTAACCCAGCATGGGTGTCTCAGGGAGAAAGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTTAATAAGACTAACCCAGCATGGGTGTCTCAGGGAGAAAGCAGA  500

seq1  TTCTATGGATGTAGTCTGGGAACAGGCTTGGGGCATTTCAAGCAATGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGGATGTAGTCTGGGAACAGGCTTGGGGCATTTCAAGCAATGGAT  550

seq1  ATGGGTGGCAAAGGGAAGAAGTGTCTTCTAGCAAAAGGGCTTCACAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGGCAAAGGGAAGAAGTGTCTTCTAGCAAAAGGGCTTCACAAATT  600

seq1  AAGAGGGTTCTTGGCTATAGGTCTGAAATTAGTCTTGCAGATTTTTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGTTCTTGGCTATAGGTCTGAAATTAGTCTTGCAGATTTTTACAT  650

seq1  GGAGGTGAGTTGATGAAAGAGGAGGCAAAGGAAAGAAATAACTGACCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGAGTTGATGAAAGAGGAGGCAAAGGAAAGAAATAACTGACCCAG  700

seq1  GAAAGTTGGCTTGCACACAAGGTGGGTTCCTGGGTGATTGTTTCTGGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTGGCTTGCACACAAGGTGGGTTCCTGGGTGATTGTTTCTGGATC  750

seq1  TAGTTCAGGATATGTGACTTGCACACAGAGTAGTTCCACAGGCTTTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCAGGATATGTGACTTGCACACAGAGTAGTTCCACAGGCTTTGAGA  800

seq1  CTAAAATTAGGCTTCTTGGTTACCACTGACCCTTTCTGTCCCTTCTTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATTAGGCTTCTTGGTTACCACTGACCCTTTCTGTCCCTTCTTCCC  850

seq1  TACCTTTCTTGCTTCCTTTCTTACTCATTTTATTCTTTCCCTTTTCCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTCTTGCTTCCTTTCTTACTCATTTTATTCTTTCCCTTTTCCTTT  900

seq1  TTAAAATTTGAAACAGCTATAGGAAGACATTAAAATTTATGCAGTGTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTTGAAACAGCTATAGGAAGACATTAAAATTTATGCAGTGTTTA  950

seq1  GCATATGAAAGTGTTTGAACTTCTAGTCTTCC-TAAAAAAATACAGATCT  999
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCATATGAAAGTGTTTGAACTTCTAGTCTTCCTTAAAAAAATACAGATCT  1000

seq1  GAGAGTAAAGTAGTAAAAATTCATA--TAAATA-TATTGTAAAAGATATT  1046
      |||||||||||||||||||||||||   ||||| ||||||||||||||||
seq2  GAGAGTAAAGTAGTAAAAATTCATAATAAAATATTATTGTAAAAGATATT  1050

seq1  GTAATGCAGTA-TCTTT--AATTA--TTTTAAAGCAACAATT-GGTTGAT  1090
      ||||||||||| |||||  |||||  |||||||||||||||| |||||||
seq2  GTAATGCAGTATTCTTTTAAATTAATTTTTAAAGCAACAATTGGGTTGAT  1100

seq1  C--AATATTCTG-TTCATAGTGAAAGGTTTTATTAT--AAAATCTCA-TT  1134
      |  | ||||||| ||||||||| ||| |||||||||  || |||||| ||
seq2  CCAATTATTCTGTTTCATAGTG-AAGTTTTTATTATTAAAGATCTCAGTT  1149

seq1  ATATAAAATA  1144
      ||||||||||
seq2  ATATAAAATA  1159


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