BAC Information

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BAC

Clone NameB6Ng01-286H10
Chromosome2 (Build37)4 (Build37)
Map Location 82,126,435 - 82,127,64360,051,700 - 60,052,214
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040704, Zfp804a
Downstream geneLOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286H10.bB6Ng01-286H10.g
ACCGA084653GA084654
length1,2111,001
definitionB6Ng01-286H10.b B6Ng01-286H10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(82,126,435 - 82,127,643)(60,051,700 - 60,052,214)
sequence
gaattcctctttatgaatgggaagcattgctagtgcctcagcaccagcta
ataatgtacactctctgaaaacccctaacaacccccaaaagtttatatgg
cctttattcaccccaataaaagagacctatttcactgaaaactttatcaa
caaaggctgtttttcactggcattcctcaccatcttcagaacttacttgc
ctgtttaagcttcctgagtctagccaggtgcatagcagtgtatggataac
ccaaaaccagaagctaaaccaagctggcaaaggtgatggtcttttagtca
gctacaaatgatgggggagatggtatgttattttgaatatatttacttgt
ccattaatgccaactgtcaacaataagatctctagaagtcataatactgg
gacaagcaaccaagtaaaagccaagtaatttgttgacaacctaggactcg
catctatgtcaggttgtatttgtaacagctctaaacaataggtataagtt
gctccccatgaatgtgctgtgttagtatgcgtaaattatcaaagacttaa
taaaatcataaaaactgtgatgtaaaaacaaagtaaatacctacaaatga
attaaatgctgtgtcccagtatactcaggtgtatactccatccaggcacg
ttttcatcaagtttttagtacatgcattttatagcaaactgtgtgctctg
tgtgaacttccacaagaatcctttcattaaaaatttattcttctgcacat
ttaagcatgtatgtaattaaaatcagatacatcatgggaagaaacatgca
gtaagcaaagccttgtacaatctcaccctgtcaatcaaaacagagaacta
cctaaatgatgccacctaacaagcaaactacttctcttgagtactgcaaa
agtagccccaaacaacttccagaccccgagaatgctccctcatgtagccc
ttttgtcattcttgacttctcattttcctgtctactaacaagcacatggt
tgaaataagggtaatccataattaattatataataataaccttttgttaa
tctgtaaaccactgatgttatttcttgaaatgaaatgtaagagaacctgt
acacatctgccccaggttcatataccttaaaattaactagcgagtttcag
tatgcaactaataccatgtagtattaatacctgtaaatgaggtttttttt
ccacactaaaa
gaattctctgccctgccttaaccacttgttgacatgtgaaaaggaacaaa
aaggcttctaaaactggagaaagttcaaggccagacatacctcgtaaagc
tgtaatgtgtcccgcagttctggttccgcctcgcgaacgagggatctccc
ttgcgccagtgtgatggtagttccagggtttctcgatgccacttatcctg
agcttttgtccatgccggcaagaacacactcaggacaacaggaatcttct
gcggcaaaaggctttattgcttacttcttcaggaggaagagagcaaatgg
cgaaaccccgtcccttttatggagaattgtcctccaccttggacgtattg
attggctgcagcccattggccgagttgtcatcatggggaaggcaaaacac
atggagtggaaaactaccccggcacatgtgcagattatttgtttactact
tagaacacaggatgtcagcaccatcttgtaatggtgaatgtgagggcggc
tcctcacagactataactgagggttctttaagctggggatacggagccta
aagtggccacattctctagagataggcaggactaccagtggaaggataag
gacaccaacctacccacaaaaccttccaccaaaacaatgttttacctaca
agaagtacagggggaaagatagggcagagactgagggaatggtcaaccga
tgtctagcccaacttcagacctatcctattgtcaaacaccaatccctgcc
actattaatgatagttatgcttgcagacaggaggctagcatacttttaat
ctgagagcctccacccagcagcagaggcccacagtcaaacattagatgaa
gttcagggggccttgtggaagagttggaagaggaattgagggacttgaag
aggacaggactatgcaataagaccaacagagttcactagcctcggccttt
gagggctctcagagactgacctcaaacaacaaaaaaaaaaaaagcatatt
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82126435_82127643
seq2: B6Ng01-286H10.b_47_1257

seq1  GAATTCCTCTTTATGAATGGGAAGCATTGCTAGTGCCTCAGCACCAGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTTATGAATGGGAAGCATTGCTAGTGCCTCAGCACCAGCTA  50

seq1  ATAATGTACACTCTCTGAAAACCCCTAACAACCCCCAAAAGTTTATATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTACACTCTCTGAAAACCCCTAACAACCCCCAAAAGTTTATATGG  100

seq1  CCTTTATTCACCCCAATAAAAGAGACCTATTTCACTGAAAACTTTATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTCACCCCAATAAAAGAGACCTATTTCACTGAAAACTTTATCAA  150

seq1  CAAAGGCTGTTTTTCACTGGCATTCCTCACCATCTTCAGAACTTACTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCTGTTTTTCACTGGCATTCCTCACCATCTTCAGAACTTACTTGC  200

seq1  CTGTTTAAGCTTCCTGAGTCTAGCCAGGTGCATAGCAGTGTATGGATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAAGCTTCCTGAGTCTAGCCAGGTGCATAGCAGTGTATGGATAAC  250

seq1  CCAAAACCAGAAGCTAAACCAAGCTGGCAAAGGTGATGGTCTTTTAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACCAGAAGCTAAACCAAGCTGGCAAAGGTGATGGTCTTTTAGTCA  300

seq1  GCTACAAATGATGGGGGAGATGGTATGTTATTTTGAATATATTTACTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAAATGATGGGGGAGATGGTATGTTATTTTGAATATATTTACTTGT  350

seq1  CCATTAATGCCAACTGTCAACAATAAGATCTCTAGAAGTCATAATACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAATGCCAACTGTCAACAATAAGATCTCTAGAAGTCATAATACTGG  400

seq1  GACAAGCAACCAAGTAAAAGCCAAGTAATTTGTTGACAACCTAGGACTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGCAACCAAGTAAAAGCCAAGTAATTTGTTGACAACCTAGGACTCG  450

seq1  CATCTATGTCAGGTTGTATTTGTAACAGCTCTAAACAATAGGTATAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATGTCAGGTTGTATTTGTAACAGCTCTAAACAATAGGTATAAGTT  500

seq1  GCTCCCCATGAATGTGCTGTGTTAGTATGCGTAAATTATCAAAGACTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCATGAATGTGCTGTGTTAGTATGCGTAAATTATCAAAGACTTAA  550

seq1  TAAAATCATAAAAACTGTGATGTAAAAACAAAGTAAATACCTACAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCATAAAAACTGTGATGTAAAAACAAAGTAAATACCTACAAATGA  600

seq1  ATTAAATGCTGTGTCCCAGTATACTCAGGTGTATACTCCATCCAGGCACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGCTGTGTCCCAGTATACTCAGGTGTATACTCCATCCAGGCACG  650

seq1  TTTTCATCAAGTTTTTAGTACATGCATTTTATAGCAAACTGTGTGCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATCAAGTTTTTAGTACATGCATTTTATAGCAAACTGTGTGCTCTG  700

seq1  TGTGAACTTCCACAAGAATCCTTTCATTAAAAATTTATTCTTCTGCACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACTTCCACAAGAATCCTTTCATTAAAAATTTATTCTTCTGCACAT  750

seq1  TTAAGCATGTATGTAATTAAAATCAGATACATCATGGGAAGAAACATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCATGTATGTAATTAAAATCAGATACATCATGGGAAGAAACATGCA  800

seq1  GTAAGCAAAGCCTTGTACAATCTCACCCTGTCAATCAAAACAGAGAACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCAAAGCCTTGTACAATCTCACCCTGTCAATCAAAACAGAGAACTA  850

seq1  CCTAAATGATGCCACCTAACAAGCAAACTACTTCTCTTGAGTACTGCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATGATGCCACCTAACAAGCAAACTACTTCTCTTGAGTACTGCAAA  900

seq1  AGTAGCCCCAAACAAC-TCCAGACCCCGAGAATGCTCCCTCATGTAG-CC  948
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  AGTAGCCCCAAACAACTTCCAGACCCCGAGAATGCTCCCTCATGTAGCCC  950

seq1  TTTTGTCATTCTTGACTTCTCATTTTCCTGTCTACT-ACAAGCACATGGT  997
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  TTTTGTCATTCTTGACTTCTCATTTTCCTGTCTACTAACAAGCACATGG-  999

seq1  TTGAAATAAGG--TATTCATTAATAATAATAATAATAATAAACCTTTG-T  1044
      |||||||||||   || ||| | |||| || |||||||||| | |||| |
seq2  TTGAAATAAGGGTAATCCATAATTAATTAT-ATAATAATAACCTTTTGTT  1048

seq1  AATCTGTATACCACTGATGT--ATTCTTG-AATGGAATGT-AGAGAACCT  1090
      |||||||| |||||||||||   |||||| |||| ||||| |||||||||
seq2  AATCTGTAAACCACTGATGTTATTTCTTGAAATGAAATGTAAGAGAACCT  1098

seq1  GTACACATCTGCCCCAGGTCATTATACC-TAAAATAAAATTTAGCAGAGT  1139
      |||||||||||||||||||   |||||| |||||| ||   |||| ||||
seq2  GTACACATCTGCCCCAGGTTCATATACCTTAAAATTAA--CTAGC-GAGT  1145

seq1  TCAATTATGCAAACATTTAAATACCATGTAG-ATTAATACCCCTGTAAAT  1188
      |  | |||||||       |||||||||||| |||||||  |||||||||
seq2  TTCAGTATGCAA-----CTAATACCATGTAGTATTAATA--CCTGTAAAT  1188

seq1  AGGGTTTTTTTT--TCACTAAAA  1209
        ||||||||||   ||||||||
seq2  GAGGTTTTTTTTCCACACTAAAA  1211

seq1: chr4_60051700_60052214
seq2: B6Ng01-286H10.g_70_571

seq1  GAATTCTCTGCCCTGCCTTAACCACTTGTTGACATGTGAAAAGGAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCCCTGCCTTAACCACTTGTTGACATGTGAAAAGGAACAAA  50

seq1  AGGGCTTCTAACACTAGAGAAAGTTCAAGGCCATACATACCTCGTAAAGC  100
      | ||||||||| ||| ||||||||||||||||| ||||||||||||||||
seq2  AAGGCTTCTAAAACTGGAGAAAGTTCAAGGCCAGACATACCTCGTAAAGC  100

seq1  TGTAATGTGTCCCGCAGTTCTGGTTCCGCCTTGCGAACGAGGGATCTCCC  150
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTAATGTGTCCCGCAGTTCTGGTTCCGCCTCGCGAACGAGGGATCTCCC  150

seq1  TTGCGCCGGTGTGATGGTAGTTCCCGGATT--TCGGCACCACTTATCCTG  198
      ||||||| |||||||||||||||| || ||  |||   ||||||||||||
seq2  TTGCGCCAGTGTGATGGTAGTTCCAGGGTTTCTCGATGCCACTTATCCTG  200

seq1  AGCTTTTGTCCCCACCAGCAAGAACATGCTCAGGACAACCAGAATCTCCT  248
      |||||||||||   || |||||||||  |||||||||||  |||||| ||
seq2  AGCTTTTGTCCATGCCGGCAAGAACACACTCAGGACAACAGGAATCTTCT  250

seq1  GCGGCAAAA-GCTTTATTGCTTACTTCTTCAGGAGCAAGAGGAGAAGAGG  297
      ||||||||| ||||||||||||||||||||||||| ||||         |
seq2  GCGGCAAAAGGCTTTATTGCTTACTTCTTCAGGAGGAAGA---------G  291

seq1  GGCGAATGGCAAAACCCCGTCCCTTTTATGGAGGATTGTCCTTCGCCTCG  347
       || |||||| |||||||||||||||||||||| |||||||| | ||| |
seq2  AGCAAATGGCGAAACCCCGTCCCTTTTATGGAGAATTGTCCTCCACCTTG  341

seq1  GACGTGTCGCTCCCTGATTGGCTGCAGCCCATCGACCGAGTTGTCGTCAC  397
      ||||| |       |||||||||||||||||| | |||||||||| ||| 
seq2  GACGTAT-------TGATTGGCTGCAGCCCATTGGCCGAGTTGTCATCAT  384

seq1  GGGGAAGGCAGAGCACATGGAGTGGAAATCTACCCCAGCACATGCGCAGT  447
      |||||||||| | ||||||||||||||| ||||||| ||||||| |||| 
seq2  GGGGAAGGCAAAACACATGGAGTGGAAAACTACCCCGGCACATGTGCAGA  434

seq1  ATATTTGTTTACTACTTAGAACACAGGATGTCGGCGCCATCTTGTAATGG  497
       ||||||||||||||||||||||||||||||| || ||||||||||||||
seq2  TTATTTGTTTACTACTTAGAACACAGGATGTCAGCACCATCTTGTAATGG  484

seq1  CAAATGTGAGGGTGGCTC  515
        |||||||||| |||||
seq2  TGAATGTGAGGGCGGCTC  502