BAC Information

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BAC

Clone NameB6Ng01-286P07
Chromosome4 (Build37)
Map Location 130,742,803 - 130,899,584
singlet/doubletdoublet
Overlap genenone
Upstream geneCol16a1, Pef1, Hcrtr1, Tinagl, Gm853, Serinc2, Fabp3, Zcchc17, Wdr57, 2610200G18Rik, Pum1, LOC622577, Sdc3, Laptm5, Matn1, LOC622681, LOC100041575
Downstream geneGm831, EG664832, LOC100039799, Ptpru, Mecr, Sfrs4, EG664865, EG623230, Epb4.1, LOC666480, LOC100039835, Oprd1, LOC664894, Ythdf2, LOC664903, Gmeb1, Rnu11, Taf12, 9530096D07Rik, LOC100039864, Trspap1, Rcc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286P07.bB6Ng01-286P07.g
ACCGA085013GA085014
length1,133759
definitionB6Ng01-286P07.b B6Ng01-286P07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,742,803 - 130,743,936)(130,898,756 - 130,899,584)
sequence
gaattcaaatgtttccctgacaccctcccccccccagaaaggaaggaagg
aaggaaggaaggaaggaaggaaggaaggaagaaagaaagaaagaaagaaa
gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaggaagga
agatatcagaagaagtgactccaattaaaatagacgtttgtctaagggca
acagaaaagaaatagcaacttgatgggaacgaagccctctttatcaataa
ttagtttaaatgaaaatggatgcagctgtccagtcaaaacataagattgt
caggatagattagaagccataaacaaactgtctccaggagactctctttc
gatgcaaagacaggtctttattgaaagtgaaagacttggaatgagagcca
tgcaaatagaagcccgaacaggcgagcattggatatggtaaaactgctca
aaactcattttaaatcaggatcacagggctcattagcaggaagctggggt
cttcccaatgagagcacaccccaatatctgtccatctgcttagagccgtt
gtagatgatactgaactaaaccaggcagccttgctcacaaacaaacctgg
tattgtagcctgcagggagggtcatagtctaccttgttctgtgctagtgg
gtaatggatccctcacgacctccccggctgctttttcctcaggcaaacag
tggctgagtatattcatccagactcaactagggaccattttctgaggagc
ctgtggctcttgtcactccacactcttgattttgagtccagcctccccct
cttccacctcaccccgcccacatggctctccaaaggtaaccaagcaaact
cctgaactctgagagccagggagggcctttccagcagcctggaaaccctt
gaattttatagagagactgaagctgggagagactcagaccagccgggtgg
gaggactgctgacttgaaggtaaagctcctcaccacagtcatgctggcta
cagagtgcagagcaccatcgggtggccctggtgaggaccattaacatctg
accacctggtgctccacacagctatgacctcctcccttgaccagtgcatt
ctttgtggagtggtggatgtcaatctcctattt
gaattctcagcgtggccatgtaaagaacaacaacaaaaggcatatttgag
ttatggtcaggtgaccgctgatcaggatttcagtagaatgagaacattgg
gtgaggaggggcacgggcatagcattacagggtctagagagttgtatggt
acaggcacaggctctacagccagtctctatggctgggggctctaccattg
agtcttttcttctgggtgagatgaccgaggccactgacccaacctaggtc
cgagggacagtgaggccatcagagtgctgtcatgcttggtgaggtggcag
ggtatgtctcagggaacacttgtgtttggatgttcaaatgggaacaggag
gaggtgacatttaatgcccatcacagagatgtcagaacacagcccatctg
gtgggtttccagcccacctttccactcatgaagagacaagaggcctctag
cctcaggccaggcatcctgcccactatatgctctggctctagtagaagga
aactcctccaggatggactgggagatgtggcatggcatgttggaatctgt
ttggaagtgtccccaaagtgtcatgctaagggctgattcccagtaaggca
gcattcagaggtgactgggccatgaggcctctcacatcatgagaggatca
atctgtggattggtccacagctcagtggactgttgggaggtgatgaaagc
ttagctggtgagtccaggttggaaagtaatagattgctggcctcctcccc
ttccccttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_130742803_130743936
seq2: B6Ng01-286P07.b_49_1181

seq1  GAATTCAAATGTTTCCCTGACACCCTCCCCCCCCCAGAAAGGAAGGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGTTTCCCTGACACCCTCCCCCCCCCAGAAAGGAAGGAAGG  50

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAA  100

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGA  150

seq1  AGATATCAGAAGAAGTGACTCCAATTAAAATAGACGTTTGTCTAAGGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCAGAAGAAGTGACTCCAATTAAAATAGACGTTTGTCTAAGGGCA  200

seq1  ACAGAAAAGAAATAGCAACTTGATGGGAACGAAGCCCTCTTTATCAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAAGAAATAGCAACTTGATGGGAACGAAGCCCTCTTTATCAATAA  250

seq1  TTAGTTTAAATGAAAATGGATGCAGCTGTCCAGTCAAAACATAAGATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTAAATGAAAATGGATGCAGCTGTCCAGTCAAAACATAAGATTGT  300

seq1  CAGGATAGATTAGAAGCCATAAACAAACTGTCTCCAGGAGACTCTCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATAGATTAGAAGCCATAAACAAACTGTCTCCAGGAGACTCTCTTTC  350

seq1  GATGCAAAGACAGGTCTTTATTGAAAGTGAAAGACTTGGAATGAGAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAAAGACAGGTCTTTATTGAAAGTGAAAGACTTGGAATGAGAGCCA  400

seq1  TGCAAATAGAAGCCCGAACAGGCGAGCATTGGATATGGTAAAACTGCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATAGAAGCCCGAACAGGCGAGCATTGGATATGGTAAAACTGCTCA  450

seq1  AAACTCATTTTAAATCAGGATCACAGGGCTCATTAGCAGGAAGCTGGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCATTTTAAATCAGGATCACAGGGCTCATTAGCAGGAAGCTGGGGT  500

seq1  CTTCCCAATGAGAGCACACCCCAATATCTGTCCATCTGCTTAGAGCCGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAATGAGAGCACACCCCAATATCTGTCCATCTGCTTAGAGCCGTT  550

seq1  GTAGATGATACTGAACTAAACCAGGCAGCCTTGCTCACAAACAAACCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATGATACTGAACTAAACCAGGCAGCCTTGCTCACAAACAAACCTGG  600

seq1  TATTGTAGCCTGCAGGGAGGGTCATAGTCTACCTTGTTCTGTGCTAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTAGCCTGCAGGGAGGGTCATAGTCTACCTTGTTCTGTGCTAGTGG  650

seq1  GTAATGGATCCCTCACGACCTCCCCGGCTGCTTTTTCCTCAGGCAAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGATCCCTCACGACCTCCCCGGCTGCTTTTTCCTCAGGCAAACAG  700

seq1  TGGCTGAGTATATTCATCCAGACTCAACTAGGGACCATTTTCTGAGGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGAGTATATTCATCCAGACTCAACTAGGGACCATTTTCTGAGGAGC  750

seq1  CTGTGGCTCTTGTCACTCCACACTCTTGATTTTGAGTCCAGCCTCCCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCTCTTGTCACTCCACACTCTTGATTTTGAGTCCAGCCTCCCCCT  800

seq1  CTTCCACCTCACCCCGCCCACATGGCTCTCCAAAGGTAACCAAGCAAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACCTCACCCCGCCCACATGGCTCTCCAAAGGTAACCAAGCAAACT  850

seq1  CCTGAACTCTGAGAGCCAGGGAGGGCCTTTCCAGCAGCCTGGGAAACCCT  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCTGAACTCTGAGAGCCAGGGAGGGCCTTTCCAGCAGCCT-GGAAACCCT  899

seq1  TGAATTTTTATAGAGAAGACTGAGGCTGGGAGAGACTCAGACCCAGCCGG  950
      |||| |||||||||| ||||||| ||||||||||||||||| ||||||||
seq2  TGAA-TTTTATAGAG-AGACTGAAGCTGGGAGAGACTCAGA-CCAGCCGG  946

seq1  GTGGGAGGACTGCTGACTTGAAGGTAAAGCTCCTCACCACAGGTCATGCT  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTGGGAGGACTGCTGACTTGAAGGTAAAGCTCCTCACCACA-GTCATGCT  995

seq1  GGCTACAGAGTGCAGAGCAACCATCGGGTGGCCCTGGTGAGGACCATTAA  1050
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGCTACAGAGTGCAGAGC-ACCATCGGGTGGCCCTGGTGAGGACCATTAA  1044

seq1  CATCCTGA-CACCTGGTGCT-CACACAGCTATGACCT-CTCCCTTGACCA  1097
      ||| |||| ||||||||||| |||||||||||||||| ||||||||||||
seq2  CAT-CTGACCACCTGGTGCTCCACACAGCTATGACCTCCTCCCTTGACCA  1093

seq1  GTGCCATTCTGT---GAGTGGT-GATGTCATTCTCCTATTT  1134
      ||| |||||| |   ||||||| ||||||| ||||||||||
seq2  GTG-CATTCTTTGTGGAGTGGTGGATGTCAATCTCCTATTT  1133

seq1: chr4_130898756_130899584
seq2: B6Ng01-286P07.g_70_828 (reverse)

seq1  GAAGGGGAAGGGGAAGGGGAAGGGGAAGGGGAAGGGGAAGGGGAAGGGGA  50
                                                        
seq2  --------------------------------------------------  0

seq1  AGGGGAAGGGGAAGGGGAAGGGGAAGGGGAAGGGAGGAGGCCAGCAATCT  100
                      ||||||||||     |||||||||||||||||||
seq2  ----------------GAAGGGGAAG-----GGGAGGAGGCCAGCAATCT  29

seq1  ATTAC-TTCCAACCTGGACTCACCAGCTAAGCTTTCATCACCTCCCAACA  149
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTTCCAACCTGGACTCACCAGCTAAGCTTTCATCACCTCCCAACA  79

seq1  GTCCACTGAGCTGTGGACCAATCCACAGATTGATCCTCTCATGATGTGAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACTGAGCTGTGGACCAATCCACAGATTGATCCTCTCATGATGTGAG  129

seq1  AGGCCTCATGGCCCAGTCACCTCTGAATGCTGCCTTACTGGGAATCAGCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCATGGCCCAGTCACCTCTGAATGCTGCCTTACTGGGAATCAGCC  179

seq1  CTTAGCATGACACTTTGGGGACACTTCCAAACAGATTCCAACATGCCATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCATGACACTTTGGGGACACTTCCAAACAGATTCCAACATGCCATG  229

seq1  CCACATCTCCCAGTCCATCCTGGAGGAGTTTCCTTCTACTAGAGCCAGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTCCCAGTCCATCCTGGAGGAGTTTCCTTCTACTAGAGCCAGAG  279

seq1  CATATAGTGGGCAGGATGCCTGGCCTGAGGCTAGAGGCCTCTTGTCTCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGTGGGCAGGATGCCTGGCCTGAGGCTAGAGGCCTCTTGTCTCTT  329

seq1  CATGAGTGGAAAGGTGGGCTGGAAACCCACCAGATGGGCTGTGTTCTGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTGGAAAGGTGGGCTGGAAACCCACCAGATGGGCTGTGTTCTGAC  379

seq1  ATCTCTGTGATGGGCATTAAATGTCACCTCCTCCTGTTCCCATTTGAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTGATGGGCATTAAATGTCACCTCCTCCTGTTCCCATTTGAACA  429

seq1  TCCAAACACAAGTGTTCCCTGAGACATACCCTGCCACCTCACCAAGCATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACACAAGTGTTCCCTGAGACATACCCTGCCACCTCACCAAGCATG  479

seq1  ACAGCACTCTGATGGCCTCACTGTCCCTCGGACCTAGGTTGGGTCAGTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACTCTGATGGCCTCACTGTCCCTCGGACCTAGGTTGGGTCAGTGG  529

seq1  CCTCGGTCATCTCACCCAGAAGAAAAGACTCAATGGTAGAGCCCCCAGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGTCATCTCACCCAGAAGAAAAGACTCAATGGTAGAGCCCCCAGCC  579

seq1  ATAGAGACTGGCTGTAGAGCCTGTGCCTGTACCATACAACTCTCTAGACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGACTGGCTGTAGAGCCTGTGCCTGTACCATACAACTCTCTAGACC  629

seq1  CTGTAATGCTATGCCCGTGCCCCTCCTCACCCAATGTTCTCATTCTACTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATGCTATGCCCGTGCCCCTCCTCACCCAATGTTCTCATTCTACTG  679

seq1  AAATCCTGATCAGCGGTCACCTGACCATAACTCAAATATGCCTTTTGTTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGATCAGCGGTCACCTGACCATAACTCAAATATGCCTTTTGTTG  729

seq1  TTGTTCTTTACATGGCCACGCTGAGAATTC  829
      ||||||||||||||||||||||||||||||
seq2  TTGTTCTTTACATGGCCACGCTGAGAATTC  759