BAC Information

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BAC

Clone NameB6Ng01-287D14
Chromosome4 (Build37)
Map Location 145,418,911 - 145,489,542
singlet/doubletdoublet
Overlap gene1700029I01Rik, LOC236069, LOC384084
Upstream geneLOC676844, Dhrs3, Vps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704
Downstream geneLOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287D14.bB6Ng01-287D14.g
ACCGA085205GA085206
length1,125859
definitionB6Ng01-287D14.b B6Ng01-287D14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,418,911 - 145,419,853)(145,488,685 - 145,489,542)
sequence
gaattcatacaggagagaaaccttacaaatgcagtgaatgtgaaaaatgc
tttactttcaaaggcagtctgaggattcatcagagaattcatacaggaga
gaaaccctacaaatgtagtgaatgtgacaaatcctttactgaaaatggct
gtttgagaattcatcagagaattcatacaggagagaaaccttacaaatgc
actgaatgtgacaaatgctttactttcaaaggcagtctgaggattcatca
gagaattcatacaggagagaaaccttacaaatgcactgaatgtgacaaat
cctttactgaaaagggcaaactgagaattcatcagagaattcatacagga
gagaaaccttacaaatgtagtgaatgtgacaaatgctttactgaaaaagg
ccatcagagaattcatacaggagagataccttacaaatagtttgtatgtg
acaaatacaatacaatgtcagtctgagaaatcatcagtttttaatacagt
agagaatatttataaatgaagtgaatgagacaatcctttaccaagatata
tcatcttaaaaatcattagagaatacttacagaagagaaacttttcaatt
atatcgaaggtatgaatcctttactcttggcctatttcctagaatgttaa
cagtgaatacttacaggatacaaacttaactcatgcattgtatgaagaaa
tatctttgacttcatttcaggtcaaagagaatatctaataactttttagg
ggaaagtatttctgttggggaaagtgtggcctgtgttttattcacgttct
attcttgacaacaattgaggctccacactagagaattagtatgattatga
aaatcatgtgaaaactttcatgcaatgttcaaatcttaaataatgtcaac
tattttttgcttgaagaaactctgaaatgtaaaaatgtagaaagcttttc
atgacacctttttacttgttcacccttaaatgttacagatgagacaagtt
ggaagtgagagatttttattgtgtacacatcatgagaacagaaataatcc
attcaaaagaaactatttagtctttaatgcagtcctcaaatatctataaa
cctgtacatcctgtatatttaattc
gaattctctgatgaatactaagattggattgtttggtaaaacatttgtca
cattcactgcatttgtaaggtttctctcctgtatgaattctctgatgcat
agtaagattgaatttgtttttaaaacatttgtcacattcactacatttgt
aaattttctcttctgtatgaatttcctgatgaatactaagatggatctga
tgggtaaagcatttgtcacttttactactttcgtaaggtttctttccatg
ataaattctctgctgactttgtagtttttctctgtgggtaagatatttgt
gaaattcactacatttgtaagggttccctgcaatattgtcttttttcacc
atgactttatgtttagaaacaaaaaccttctctaattctgcatttcggtt
gtgttttttcttctgcatgttaattccttgattgagactaatggtagaaa
acaaacttaaactgtttacagagtcattgtatttgcaaacttttttagtg
ttcctgggcttaagtcttttttggttcgagaattgaagagcatcagagct
gtgattagttttgtaaggtgtacactggagggattcaagaatgacattgc
taagcttgtcccatttagaagacttctcttgaatattcatgtgttcatgg
acaatgtactggctgtcttgatccaataccttcccattctttccacatat
gcaatgattttctgaaaaaaaaggggggggggcaattagaggtgacatga
attacttatataaggagtaagggactcaataatcagtgagcttatggatt
cgtactctcaagaaaggtttctctctctctctctctctctctctctctct
ctctctcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145418911_145419853
seq2: B6Ng01-287D14.b_241_1169

seq1  ATGCACTGAATGTGACAAATGCTTTACTTTCAAAGGCAGTCTGAGGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTGAATGTGACAAATGCTTTACTTTCAAAGGCAGTCTGAGGATTC  50

seq1  ATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCACTGAATGTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCACTGAATGTGAC  100

seq1  AAATCCTTTACTGAAAAGGGCAAACTGAGAATTCATCAGAGAATTCATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTTTACTGAAAAGGGCAAACTGAGAATTCATCAGAGAATTCATAC  150

seq1  AGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTACTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTACTGAAA  200

seq1  AAGGCCATCAGAGAATTCATACAGGAGAGATACCTTACAAATAGTTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCATCAGAGAATTCATACAGGAGAGATACCTTACAAATAGTTTGTA  250

seq1  TGTGACAGATACAATACAATGTCAGTCTGAGAAATCATCAGTTTTTAATA  300
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAAATACAATACAATGTCAGTCTGAGAAATCATCAGTTTTTAATA  300

seq1  CAGTAGAGAATATTTATAAATGAAGTGAATGAGACAATCCTTTACCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAGAATATTTATAAATGAAGTGAATGAGACAATCCTTTACCAAGA  350

seq1  TATATCATCTTAAAAATCATTAGAGAATACTTACAGAAGAGAAACTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCATCTTAAAAATCATTAGAGAATACTTACAGAAGAGAAACTTTTC  400

seq1  AATTATATCGAAGGTATGAATCCTTTACTCTTGGCCTATTTCCTAGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATCGAAGGTATGAATCCTTTACTCTTGGCCTATTTCCTAGAATG  450

seq1  TTAACAGTGAATACTTACAGGATACAAACTTAACTCATGCATTGTATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGTGAATACTTACAGGATACAAACTTAACTCATGCATTGTATGAA  500

seq1  GAAATATCTTTGACTTCATTTCAGGTCAAAGAGAATATCTAATAACTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATCTTTGACTTCATTTCAGGTCAAAGAGAATATCTAATAACTTTT  550

seq1  TAGGGGAAAGTATTTCTGTTGGGGAAAGTGTGGCCTGTGTTTTATTCACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGAAAGTATTTCTGTTGGGGAAAGTGTGGCCTGTGTTTTATTCACG  600

seq1  TTCTATTCTTGACAACAATTGAGGCTCCACACTAGAGAATTAGTATGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCTTGACAACAATTGAGGCTCCACACTAGAGAATTAGTATGATT  650

seq1  ATGAAAATCATGTGAAAACTTTCATGCAATGTTCAAATCTTAAATAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATCATGTGAAAACTTTCATGCAATGTTCAAATCTTAAATAATGT  700

seq1  CAACTATTTTTTGCTTGAAGAAACTCTGAAAATGTAAAAATGTAGAAAGC  750
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CAACTATTTTTTGCTTGAAGAAACTCTG-AAATGTAAAAATGTAGAAAGC  749

seq1  TTTTCATGACACCTTTTTACTTGTTCACCCTTAAATGTTACAAGATGAAG  800
      ||||||||||||||||||||||||||||||||||||||||| ||||| ||
seq2  TTTTCATGACACCTTTTTACTTGTTCACCCTTAAATGTTAC-AGATG-AG  797

seq1  ACAAGTTGGGAAGTGAGGAGA-TATTATTGTGTACCACATTCATTGAG-A  848
      ||||||| |||||||| |||| | |||||||||| |||| ||| |||| |
seq2  ACAAGTT-GGAAGTGA-GAGATTTTTATTGTGTA-CACA-TCA-TGAGAA  842

seq1  CAGAAATAATCCATTTCAAAAGGAAACTATTTAAGGTCTTTAATGCAGTC  898
      ||||||||||||| ||||||| |||||||||||  |||||||||||||||
seq2  CAGAAATAATCCA-TTCAAAA-GAAACTATTTA--GTCTTTAATGCAGTC  888

seq1  CTCAAAATATCTAATAAAACTGGTAACATTCTGTATATTTAATTC  943
      ||| |||||||| ||||| |||   |||| |||||||||||||||
seq2  CTC-AAATATCT-ATAAACCTG--TACATCCTGTATATTTAATTC  929

seq1: chr4_145488685_145489542
seq2: B6Ng01-287D14.g_68_926 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACCTTTCTT  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACCTTTCTT  50

seq1  GAGAGTACGAATCCATAAGCTCACTGATTATTGAGTCCCTTACTCCTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTACGAATCCATAAGCTCACTGATTATTGAGTCCCTTACTCCTTAT  100

seq1  ATAAGTAATTCATGTCACCTCTAATTGCCCCCCCCCC-TTTTTTTCAGAA  149
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATAAGTAATTCATGTCACCTCTAATTGCCCCCCCCCCTTTTTTTTCAGAA  150

seq1  AATCATTGCATACGTGGAAAGAATGGGAAGGTATTGGATCAAGACAGCCA  199
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AATCATTGCATATGTGGAAAGAATGGGAAGGTATTGGATCAAGACAGCCA  200

seq1  GTACATTGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAATGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAATGGG  250

seq1  ACAAGCTTAGCAATGTCATTCTTGAATCCCTCCAGTGTACACCTTACAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTTAGCAATGTCATTCTTGAATCCCTCCAGTGTACACCTTACAAA  300

seq1  ACTAATCACAGCTCTGATGCTCTTCAATTCTCGAACCAAAAAAGACTTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATCACAGCTCTGATGCTCTTCAATTCTCGAACCAAAAAAGACTTAA  350

seq1  GCCCAGGAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAACAGTT  399
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GCCCAGGAACACTAAAAAAGTTTGCAAATACAATGACTCTGTAAACAGTT  400

seq1  TAAGTTTGTTTTCTACCATTAGTCTCAATCAAGGAATTAACATGCAGAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTGTTTTCTACCATTAGTCTCAATCAAGGAATTAACATGCAGAAG  450

seq1  AAAAAACACAACCGAAATGCAGAATTAGAGAAGGTTTTTGTTTCTAAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACACAACCGAAATGCAGAATTAGAGAAGGTTTTTGTTTCTAAACA  500

seq1  TAAAGTCATGGTGAAAAAAGACAATATTGCAGGGAACCCTTACAAATGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCATGGTGAAAAAAGACAATATTGCAGGGAACCCTTACAAATGTA  550

seq1  GTGAATTTCACAAATATCTTACCCAGAGAGAAAAACTACAAAGTCAGCAG  599
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTGAATTTCACAAATATCTTACCCACAGAGAAAAACTACAAAGTCAGCAG  600

seq1  AGAATTTATCATGGAAAGAAACCTTACGAAAGTAGTAAAAGTGACAAATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTATCATGGAAAGAAACCTTACGAAAGTAGTAAAAGTGACAAATG  650

seq1  CTTTACCCATCAGATCCATCTTAGTATTCATCAGGAAATTCATACAGAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCCATCAGATCCATCTTAGTATTCATCAGGAAATTCATACAGAAG  700

seq1  AGAAAATTTACAAATGTAGTGAATGTGACAAATGTTTTAAAAACAAATTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTTACAAATGTAGTGAATGTGACAAATGTTTTAAAAACAAATTC  750

seq1  AATCTTACTATGCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTACTATGCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATG  800

seq1  CAGTGAATGTGACAAATGCTTTACCAAACAATCCAATCTTAGTATTCATC  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAGTGAATGTGACAAATGTTTTACCAAACAATCCAATCTTAGTATTCATC  850

seq1  AGAGAATTC  858
      |||||||||
seq2  AGAGAATTC  859