BAC Information

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BAC

Clone NameB6Ng01-287F19
Chromosome4 (Build37)
Map Location 147,136,713 - 147,137,859
singlet/doubletsinglet
Overlap geneLOC100041677
Upstream geneOTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652
Downstream geneLOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287F19.bB6Ng01-287F19.g
ACCGA085308GA085309
length1,1321,193
definitionB6Ng01-287F19.b B6Ng01-287F19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtcatattctgaaacctaatcaagaacaggaagtatgttagg
tcatgagaactatgaggccgttttaagaaatggtatcatctaaaattatc
atagtcataattgtgttgtcttctctcagtaaaaggtagatgagttaatg
gactcagactcacagcataatttagacattgtaatgtatatatatgaggt
ctacatccaggaatatacgtttatgaacattttttgataaaaagaacaat
gccagtgttacatctagtttacagatagtaaagtgatggtgagtaaaact
gtgcttccaaattctacaactgtcatttttgctcagataggaaccctgta
tctctcttatctgaagttgggtgtcaatagctagtctaagatgctcagtt
tggattataagacctatatacaatggagcatcctttcttgaagaaagaga
gttagaacaccaaatacaagaatgacttaaaagaaatacgtttctttcta
ttgtagcagttaggaagtgtaaagtcagtgtatacaaacaaaattacaaa
caagacatacaatcaaataccttgtgatatgattttataagaattttata
tgaagaagagttaaatgattatttaatgaagaattaatttgagaatattt
aatgataaaaataaaaagttagcaataggtatcattaatataatgtaatg
tttgtgactatatgacaaaatcaatacagataataatttcataaattaca
cagtggttttccctttcagaatgcttagacaaacatgtataactaaatga
catatgtgaaaaaagtgataaagtaaaatgatttttataatggaaataac
catattaagatgtataagaatcatactaacacttcattttttaaggatac
attattactcatgtgtctattactgccacaactaaaatatgaaacttttg
acttcagaaattttcttctcttttattatttgaggtcattgatctagatg
attatagattacacaaaaaagatattctagttctttggactcattcctat
tctttcttttttatttattttcttgtttaattagcattttctattacatt
tcaattttccttatttaattcaaatgctatgc
gaattcatataggagagaaaccgtacaaatgcagtgagtgtgacaaatgc
tttacccaaccatcccatcttagtattcatcgtagaattcattcaggaga
gaaaccttacaaatgtagtgaatgcgacaaatgctttactgacaaaagca
gtctgagagttcatcagagaattcatacaggagagaaaccgtaccaatgc
agtgagtgtgacaaatgctttactgacaaaggcagtcttagagttcatca
tagaattcatgcaggagagaaaccttacaaatgtagtgaatgcgacaaat
gctttactgacaaaggctatctgagagttcatcatagaattcatgcagga
gagaaaccttacaaatgtagtgaatgtgacaaatgctttactcacaaagg
ctctctgagagttcatcatagaattcatgcaggagagaaaccttacaaat
gtagtgaatgtgacaaatgttttactgagaaaaacagtctgagaaggcat
cagagaattcatacaggagagaaaccttataaatgcagtgaatgtgacaa
atgctttacccgaaaatcacatcttagtattcatcagagaattcatacag
gagagaaactgtacaaatgcagtgaatgtgacaaatgctttacccaacaa
tgccatcttagtattcatcagaaaattcattcaggagagaaccttacaaa
tgcaatgaatgcgacaaatgctttagtgacaaacacagtctgagaaggca
tcagagaattcatacaggagagacaccttacaaatgtaatgaatgtgaca
aatgctttacctgaaaatcacatcttagtattcatcagataattcataca
ggagagaaaccttacaaatgtaatgaatgtgacaaatcctttactgaaaa
tggctgtctgagaattcatcagagaattcatacaggagaagaaaccttta
caaatgtaatgaatgtgacaaatgcttaccttgaaaatcacattcttagt
attcatcagatatcatacagaagagaaaccttacaaatgtagtgatggtg
aacaatcttactgaaatgctgtctggagattcatcgagaattcatacagg
agagaaactacaaacgtaacggatgtgacaaatgctactaaattccagct
gaggattcatcagagatttctcatcacggggaagagagacaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147136713_147137859
seq2: B6Ng01-287F19.b_46_1177

seq1  GAATTCCTGTCATATTCTGAAACCTAATCAAGAACAGGAAGTATGTTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCATATTCTGAAACCTAATCAAGAACAGGAAGTATGTTAGG  50

seq1  TCATGAGAACTATGAGGCCATTTTAAGAAATGGTATCATCTAAAATTATC  100
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCATGAGAACTATGAGGCCGTTTTAAGAAATGGTATCATCTAAAATTATC  100

seq1  ATAGTCATAATTGTGTTGTCTTCTCTCAGTAAAAGGTAGATGAGTTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCATAATTGTGTTGTCTTCTCTCAGTAAAAGGTAGATGAGTTAATG  150

seq1  GACTCAGACTCACAGCATAATTTAGACATTGTAATGTATATATATGAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGACTCACAGCATAATTTAGACATTGTAATGTATATATATGAGGT  200

seq1  CTACATCCAGGAATACACGTTTATGAACATTTTTTGATAAAAAGAACAAT  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTACATCCAGGAATATACGTTTATGAACATTTTTTGATAAAAAGAACAAT  250

seq1  GCCAGTGTTACATCTAGTTTACAGATAGTAAAGTGATGGTGAGTAAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGTTACATCTAGTTTACAGATAGTAAAGTGATGGTGAGTAAAACT  300

seq1  GTGCTTCCAAATTCTACAACTGTCATTTTTGCTCAGATAGGAACCCTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCCAAATTCTACAACTGTCATTTTTGCTCAGATAGGAACCCTGTA  350

seq1  TCTCTCTTATCTGAAGTTGGGTGTCAATAGCTAGTCTAAGATGCTCAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTTATCTGAAGTTGGGTGTCAATAGCTAGTCTAAGATGCTCAGTT  400

seq1  TGGATTATAAGACCTATATACAATGGAGCATCCTTTCTTGAAGAAAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTATAAGACCTATATACAATGGAGCATCCTTTCTTGAAGAAAGAGA  450

seq1  GTTAGAACACCAAATACAAGAATGACTTAAAAGAAATACGTTTCTTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAACACCAAATACAAGAATGACTTAAAAGAAATACGTTTCTTTCTA  500

seq1  TTGTAGCAGTTAGGAAGTGTAAAGTCAGTGTATACAAACAAAATTACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCAGTTAGGAAGTGTAAAGTCAGTGTATACAAACAAAATTACAAA  550

seq1  CAAGACATACAATCAAATACCTTGTGATATGATTTTATAAGAATTTTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACATACAATCAAATACCTTGTGATATGATTTTATAAGAATTTTATA  600

seq1  TGAAGAAGAGTTAAATGATTATTTAATGAAGAATTAATTTGAGAATATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGAGTTAAATGATTATTTAATGAAGAATTAATTTGAGAATATTT  650

seq1  AATGATAAAAATAAAAAGTTAGCAATAGGTATCATTAATATAATGTAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAAAAATAAAAAGTTAGCAATAGGTATCATTAATATAATGTAATG  700

seq1  TTTGTGACTATATGACAAAATCAATACAGATAATAATTTCATAAATTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGACTATATGACAAAATCAATACAGATAATAATTTCATAAATTACA  750

seq1  CAGTGGTTT--CCCTTCAGAATGCTTAGACAAACATGTATAACTAAATGA  798
      |||||||||  || ||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTTTTCCCTTTCAGAATGCTTAGACAAACATGTATAACTAAATGA  800

seq1  CATATGTGAAAAAAGTGATAAAGTAAAATGATTTTTATAATGGAAATAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTGAAAAAAGTGATAAAGTAAAATGATTTTTATAATGGAAATAAC  850

seq1  CATATTAAGATGTATAAGAATCATACTAACACTTCATTTTTTATGGATAC  898
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CATATTAAGATGTATAAGAATCATACTAACACTTCATTTTTTAAGGATAC  900

seq1  ATTATTACTCATGTGTCTATTACTGCCACAACTAAAAATATGAAACTTTT  948
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTATTACTCATGTGTCTATTACTGCCACAACT-AAAATATGAAACTTTT  949

seq1  GACTTCAGCAATGTTCTTCTC-TTTATTATTTGAGGTCATTGATCTAACA  997
      |||||||| ||| |||||||| |||||||||||||||||||||||| | |
seq2  GACTTCAGAAATTTTCTTCTCTTTTATTATTTGAGGTCATTGATCT-AGA  998

seq1  TGATTATAGATTACACAAAAAAGGAATCATCTAAGGTTCTTTGACTTCAT  1047
      |||||||||||||||||||||||  ||  ||||  ||||||||   ||||
seq2  TGATTATAGATTACACAAAAAAG--ATATTCTA--GTTCTTTGGACTCAT  1044

seq1  TCCTATTCTTTTCTTTTTTTATTTTATTTTCTTGTTTTAAATTAGGTATT  1097
      |||||||| ||||||||||   |||||||||||||||  ||||| | |||
seq2  TCCTATTC-TTTCTTTTTT--ATTTATTTTCTTGTTT--AATTA-GCATT  1088

seq1  TTCTTAATTTACATTTCAAATTTTCTTAATTTAAATTTCAAATGCTATGC  1147
      ||||    ||||||||| ||||||| | ||||||  ||||||||||||||
seq2  TTCT---ATTACATTTC-AATTTTCCTTATTTAA--TTCAAATGCTATGC  1132