MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-288B04
Chromosome	4 (Build37)
Map Location	34,263,245 - 34,264,411
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Acy1l2, Srrp, Pnrc1, Rngtt, LOC100041919, LOC100041924, Cnr1, Spaca1
Downstream gene	LOC100039220, LOC665361, LOC665367, 2700059D21Rik, Orc3l, Rars2, Slc35a1, 1700003M02Rik, Gm136, 1810030N24Rik, Zfp292, Cga, Mobkl2b, Ifnk, 3110043O21Rik, LOC620559
Link	Open Mouse BAC browser

Click to get alignment info.

name	Acy1l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242377 MGI:2685270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Srrp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:272009 MGI:2661424
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pnrc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108767 MGI:1917838
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rngtt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24018 MGI:1329041
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041919 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100041924 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041924
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Cnr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12801 MGI:104615
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spaca1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67652 MGI:1914902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039220 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039220
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 144 ESTs, 1 Protein

name	LOC665361 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665361
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC665367 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665367
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 818 ESTs, 10 Proteins

name	2700059D21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433693 MGI:1889364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Orc3l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50793 MGI:1354944
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rars2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109093 MGI:1923596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc35a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24060 MGI:1345622
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700003M02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69329 MGI:1916579
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm136 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214568 MGI:2684982
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810030N24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66291 MGI:1913541
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp292 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30046 MGI:1353423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 172 ESTs, 6 Proteins

name	Cga (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12640 MGI:88390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mobkl2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214944 MGI:2664539
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ifnk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:387510 MGI:2683287
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110043O21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73205 MGI:1920455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620559 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620559
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 887 ESTs, 3 Proteins pseudo : _no_value

name	Acy1l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77861890 GeneID:242377 MGI:2685270
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aminoacylase 1-like 2 transcript_id : NM_001034867.1

name	Srrp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387174 GeneID:272009 MGI:2661424
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine-arginine repressor protein transcript_id : NM_177774.3

name	Pnrc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113461981 GeneID:108767 MGI:1917838
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proline-rich nuclear receptor coactivator 1 transcript_id : NM_001033225.2

name	Rngtt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:101943952 GeneID:24018 MGI:1329041
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA guanylyltransferase and 5'-phosphatase transcript_id : NM_011884.2

name	LOC100041919 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252281 GeneID:100041919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100041919 transcript_id : XM_001477525.1

name	LOC100041924 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252283 GeneID:100041924
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041924 transcript_id : XM_001477543.1

name	Cnr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76096369 GeneID:12801 MGI:104615
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cannabinoid receptor 1 (brain) transcript_id : NM_007726.3

name	Spaca1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359979 GeneID:67652 MGI:1914902
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm acrosome associated 1 transcript_id : NM_026293.2

name	LOC100039220 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252245 GeneID:100039220
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 144 ESTs, 1 Protein product : similar to RNA polymerase 1-3 transcript_id : XM_001472479.1

name	LOC665367 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252285 GeneID:665367
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 818 ESTs, 10 Proteins product : similar to coiled-coil-helix-coiled-coil-helix domain containing 2 transcript_id : XM_976411.2

name	2700059D21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87080824 GeneID:433693 MGI:1889364
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700059D21 gene transcript_id : NM_001007589.3

name	Orc3l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803338 GeneID:50793 MGI:1354944
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : origin recognition complex, subunit 3-like (S. cerevisiae) transcript_id : NM_015824.3

name	Rars2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340970 GeneID:109093 MGI:1923596
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginyl-tRNA synthetase 2, mitochondrial (putative) transcript_id : NM_181406.2

name	Slc35a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560518 GeneID:24060 MGI:1345622
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35 (CMP-sialic acid transporter), member 1 transcript_id : NM_011895.2

name	1700003M02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66793399 GeneID:69329 MGI:1916579
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700003M02 gene transcript_id : NM_027041.2

name	Gm136 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388743 GeneID:214568 MGI:2684982
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 136, (NCBI) transcript_id : NM_001033255.2

name	1810030N24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348730 GeneID:66291 MGI:1913541
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810030N24 gene transcript_id : NM_025471.2

name	Zfp292 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94371663 GeneID:30046 MGI:1353423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 172 ESTs, 6 Proteins product : zinc finger protein 292, transcript variant 2 transcript_id : XM_620009.3

name	Cga (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129833 GeneID:12640 MGI:88390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein hormones, alpha subunit transcript_id : NM_009889.2

name	Mobkl2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130339 GeneID:214944 MGI:2664539
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MOB1, Mps One Binder kinase activator-like 2B (yeast) transcript_id : NM_178061.4

name	Ifnk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71534273 GeneID:387510 MGI:2683287
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interferon kappa precursor transcript_id : NM_199157.2

name	3110043O21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486790 GeneID:73205 MGI:1920455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110043O21 gene transcript_id : NM_001081343.1

name	Acy1l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77861891 GeneID:242377 MGI:2685270
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : novel protein similar to aminoacylase 1-like 2 ACY1L2 product : aminoacylase 1-like 2 protein_id : NP_001030039.1

name	Srrp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244292 CCDS:CCDS18022.1 GeneID:272009 MGI:2661424
definition	codon_start : 1 exception : mismatches in translation product : serine-arginine repressor protein protein_id : NP_808442.1

name	Pnrc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113461982 CCDS:CCDS18023.1 GeneID:108767 MGI:1917838
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : proline rich 2 product : proline-rich nuclear receptor coactivator 1 protein_id : NP_001028397.2

name	Rngtt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755342 GeneID:24018 MGI:1329041
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004484 - mRNA guanylyltransferase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004651 - polynucleotide 5'-phosphatase activity [Evidence IEA]; GO:0008138 - protein tyrosine/serine/threonine phosphatase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006370 - mRNA capping [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 note : mouse capping enzyme product : RNA guanylyltransferase and 5'-phosphatase protein_id : NP_036014.1

name	LOC100041919 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252282 GeneID:100041919
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477575.1

name	LOC100041924 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252284 GeneID:100041924
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477593.1

name	Cnr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6724315 CCDS:CCDS18025.1 GeneID:12801 MGI:104615
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : striatal cannabinoid receptor type 1 protein product : cannabinoid receptor 1 (brain) protein_id : NP_031752.1

name	Spaca1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312846 CCDS:CCDS18026.1 GeneID:67652 MGI:1914902
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : sperm acrosome associated 1 protein_id : NP_080569.1

name	LOC100039220 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252246 GeneID:100039220
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472529.1

name	LOC665367 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94371662 GeneID:665367
definition	codon_start : 1 product : hypothetical protein protein_id : XP_981505.1

name	2700059D21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86604728 CCDS:CCDS18027.1 GeneID:433693 MGI:1889364
definition	codon_start : 1 product : hypothetical protein LOC433693 protein_id : NP_001007590.2

name	Orc3l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27902275 CCDS:CCDS18028.1 GeneID:50793 MGI:1354944
definition	GO_component : GO:0005664 - nuclear origin of replication recognition complex [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence TAS] codon_start : 1 exception : mismatches in translation note : origin of replication 3 homolog product : origin recognition complex, subunit 3-like protein_id : NP_056639.2

name	Rars2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088898 CCDS:CCDS18029.1 GeneID:109093 MGI:1923596
definition	codon_start : 1 exception : mismatches in translation product : arginyl-tRNA synthetase-like protein_id : NP_852071.1

name	Slc35a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755558 CCDS:CCDS18030.1 GeneID:24060 MGI:1345622
definition	GO_component : GO:0000139 - Golgi membrane [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005338 - nucleotide-sugar transporter activity [Evidence IEA]; GO:0005351 - sugar porter activity [Evidence IEA] GO_process : GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0015780 - nucleotide-sugar transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : solute carrier family 35 (CMP-sialic acid transporter), member 1 protein_id : NP_036025.1

name	1700003M02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66793400 CCDS:CCDS18031.1 GeneID:69329 MGI:1916579
definition	codon_start : 1 product : hypothetical protein LOC69329 protein_id : NP_081317.2

name	Gm136 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701762 CCDS:CCDS18032.1 GeneID:214568 MGI:2684982
definition	codon_start : 1 product : hypothetical protein LOC214568 protein_id : NP_001028427.1

name	1810030N24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384890 GeneID:66291 MGI:1913541
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66291 protein_id : NP_079747.1

name	Zfp292 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82892898 GeneID:30046 MGI:1353423
definition	codon_start : 1 product : zinc finger protein 292 isoform 2 protein_id : XP_620009.2

name	Cga (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753414 CCDS:CCDS18035.1 GeneID:12640 MGI:88390
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA] codon_start : 1 note : glycoprotein hormones alpha subunit product : glycoprotein hormones, alpha subunit protein_id : NP_034019.1

name	Mobkl2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017359 CCDS:CCDS18036.1 GeneID:214944 MGI:2664539
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : MOB1 (Mps One Binder) kinase activator-like 2B product : Mob3b protein protein_id : NP_835162.1

name	Ifnk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40255305 CCDS:CCDS18037.1 GeneID:387510 MGI:2683287
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005126 - hematopoietin/interferon-class (D200-domain) cytokine receptor binding [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence IEA]; GO:0009615 - response to virus [Evidence IEA] codon_start : 1 product : interferon kappa precursor protein_id : NP_954608.1

name	3110043O21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486791 GeneID:73205 MGI:1920455
definition	codon_start : 1 product : hypothetical protein LOC73205 protein_id : NP_001074812.1

name	LOC665361 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665361
definition	number : 3 pseudo : _no_value

name	LOC665361 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665361
definition	number : 2 pseudo : _no_value

name	LOC665361 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665361
definition	number : 1 pseudo : _no_value

name	LOC620559 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252286 GeneID:620559
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 887 ESTs, 3 Proteins product : similar to ribosomal protein S2 pseudo : _no_value transcript_id : XR_033376.1

clone name	MSMg01-125P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499M21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-384I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135N24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-329D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208L17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-288B04.b	B6Ng01-288B04.g
ACC	GA085831	GA085832
length	1,132	1,157
definition	B6Ng01-288B04.b	B6Ng01-288B04.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctctatcttccagtgtcttcttcaatttaattattcaattttaaa gattttttatttttaaagttttaattgtagagatttttcatatccttgtt tggtttattaaaaggtatttttaggctgttgtgaaaagaattgttttcct aatttttaaaatttgtatcctggtactttgctgaagatgtccatcaactc taagaaggtgtactggctagttttgtgtcaacttgacacagctggagtta tcacagagaaaggagctttagttgaggaaatgcctccatgagatccaact gtaaggcattttctcaattagtgatcaagggggaaaggccccttgtgggt gggaccatctctgggctgatagtgttggttggttaagagagcaggctgag caagccaggggaagcaagccagtaaagaacatccctccatggcctctgca tcagctcctgcttcctgacctgcttgagctccagtcctgacttctttccg tgatgaacagcagtgtggaagtggaagctgaataaacacttccctcccca acttgcttcttggtcatgatgtttgtgcaggaatagaaaccctgactaag acagaaggttagtgaagtttttttggtttttttgttttttgttttttgtt tttgttttttgtttgtttacttggtttttggaatcttctaggaattccat gtgtagactcttagtatctgcaaatagacaaagacaagctttgacttcat tttctattatatcctttttaattgtttttcttgttttcttgttttatccc aaatttccagtactattagtaaataagagtagaaataaaacaccctttgt ctttttcctgactttttttgcaagtgtttcaaatcctatttatttttttt gactttcttatattttgagtcctatttattatatgtaaggctctaggttt atcacatataaactttatatcttgtacgatgttctcttccacctttctca ggactttatacacggaagaagttgtattttttgtcaaaccagcttttctt accctacacagattactggtaatgtcctgtttttggagtctactttacca aaaaaggtaaatcactttttccaataatgtta	gaattctcctaacacctgtctgagcatcgaggtaggcttttaccctgttc tgtccacaggtcacaccccaggcctggtcgatatcttaatcacagtgttg atgaagactttttcagaggatccagctgagccacattcagactccagaga aaatttgagacaagcaggtgttgttttaaatggctaaatatgtggcaatt tgatgtgcagccaagaacatttcaatcagatctgatataaaattttactt tttttttttgtctaagaagatgcagatcgggcctatgatatttaaaatta ttttaatcagaactttagaagcatttagggtagttctaaaatcatatttt aaaaaaaccacatcaacttatggccagaaccaggagaaactgatgtatag acattttaaagcctgtcgataaatttgatcttcctaatatgtgaagagta atatatcagtaagagaaaggtctgaaatccattaacatgagagaaggatg gcagtggacagaaaagaaagtccaacacggggttaggggagggtttccta agcaaaaaaagacaaaataaacatgccaagaccggtttcctacttgtcac attgcagaagcatttgatggctcaggcaggacagtaggaatgttgttcgc gtgttagcctccatgcttccagatgcagtacttaatcaaagtttagaaag ggcaaacacacctttgacccatcaactctacttctaaatatttatttcct ttttaaaatgttattttttgagaatttcatctgtatgtttttatcatatt ttccccatcctccaactctccctaaaccctctcctccttacccaattttt ctgttcatacctactctaaagaaaaaaaaaatgaaaaaaaagccactgat tattcatggagtatgatttgcgttggtcaatgactcctgagcatgggaca gccccagagtgtggttggtttagcccagtgcattccactgaagaaacttc ctctcagcagacccccttatccacggagatctcatctcccaagttaatag ctaacttatcacaggtattgttgattggcccacagaatggtatctacctt tatccgtattgaactatccattaattgactggatgactgtttctctgcgg gtaatta
quality values	Open. Hide. 41 13 28 30 52 45 39 54 62 52 42 62 62 62 47 26 21 56 62 62 62 46 62 62 62 56 56 41 32 44 56 62 13 13 11 10 16 13 18 45 14 34 34 28 28 30 34 34 62 62 43 59 59 62 62 62 62 59 62 62 62 62 62 59 62 62 59 59 62 62 62 59 62 62 62 62 62 41 30 24 48 25 27 44 46 56 56 48 54 43 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 56 56 56 56 62 59 62 62 62 62 62 54 59 59 62 56 56 54 56 59 56 50 56 59 56 50 56 50 62 59 59 59 62 59 59 62 62 62 62 59 59 56 62 62 62 59 59 59 59 59 59 59 59 62 62 59 59 62 62 62 56 62 56 59 59 59 62 62 59 62 59 59 59 59 50 36 59 59 59 59 59 62 54 62 62 59 59 62 62 62 54 56 59 50 62 59 56 62 59 62 59 59 59 62 62 59 59 59 59 46 46 56 59 59 62 59 59 50 50 45 45 56 59 59 59 59 59 50 62 59 51 59 59 59 59 59 59 59 59 56 62 62 59 56 59 46 54 39 54 54 56 56 62 62 59 62 62 59 59 56 40 59 59 59 62 46 62 62 62 62 54 62 62 62 62 62 62 59 62 59 54 36 54 59 59 62 59 59 62 62 62 62 59 59 51 62 51 59 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 54 54 62 62 62 62 62 62 62 62 59 59 62 48 56 56 56 59 62 62 54 54 59 59 56 59 62 62 59 59 59 62 59 59 62 62 59 59 59 56 59 62 59 62 62 62 62 62 62 62 62 59 62 59 51 62 51 62 59 59 59 50 62 56 59 59 59 49 59 56 59 46 59 59 34 34 43 40 36 40 45 34 50 37 45 51 51 46 59 51 59 51 59 59 51 59 59 59 51 59 62 62 62 62 62 62 41 51 59 50 38 51 59 50 50 56 45 43 50 59 50 43 59 59 62 59 44 62 56 56 62 62 56 56 44 44 56 56 56 56 56 56 56 56 56 50 56 56 47 47 51 39 51 56 51 51 56 51 51 51 62 62 47 62 56 56 56 42 51 51 37 51 51 62 43 62 56 56 56 62 56 62 56 42 56 31 46 36 38 56 56 56 62 56 43 47 46 38 43 43 50 42 56 47 56 56 62 62 62 62 62 62 62 62 62 47 50 38 41 46 43 52 54 62 52 54 62 43 43 48 39 43 47 52 38 52 52 48 48 47 39 54 58 58 46 50 32 27 52 49 39 39 37 21 47 42 33 39 52 52 52 52 43 52 52 42 46 23 54 50 42 52 54 42 22 38 42 45 54 50 52 52 54 54 54 52 54 54 54 54 52 52 48 43 47 46 47 52 50 42 52 41 47 48 46 48 52 50 47 35 37 33 27 32 39 24 7 27 49 50 50 46 52 50 50 50 50 27 48 13 50 50 46 20 48 50 50 42 51 50 54 48 50 50 50 37 46 42 37 48 32 24 51 35 41 52 53 53 41 32 32 19 10 23 31 53 22 41 46 41 53 33 41 37 50 32 50 54 50 33 50 18 27 40 50 49 47 50 34 19 42 26 40 26 50 50 41 33 30 26 29 35 25 26 39 38 36 32 51 41 36 21 17 33 33 33 27 51 33 33 32 52 39 41 27 39 39 32 37 35 29 31 21 47 54 37 32 30 13 9 38 46 13 50 50 50 49 39 21 40 46 29 54 44 37 42 30 31 52 39 37 40 31 34 23 19 47 16 22 12 9 23 54 54 52 37 37 40 53 32 51 32 34 13 8 24 21 15 11 40 47 32 51 34 28 32 11 31 29 11 19 23 31 30 40 53 40 33 25 20 29 47 31 9 32 19 27 31 20 13 51 51 51 51 10 23 24 35 43 14 33 51 51 51 33 30 32 23 18 16 27 19 23 35 10 32 33 29 27 6 30 11 9 29 21 32 42 46 9 31 31 42 46 46 40 29 40 33 31 12 14 9 41 18 34 30 8 13 26 30 25 31 37 14 25 30 23 42 33 22 27 26 8 39 14 5 7 37 31 9 20 6 20 14 15 12 14 23 20 24 27 25 25 18 21 32 37 11 10 8 8 24 11 14 44 16 34 11 21 21 17 21 48 33 10 15 7 20 36 25 31 31 6 31 7 6 10 9 15 5 11 8 9 25 11 13 29 14 11 17 13 19 32 19 9 4 7 16 21 27 32 8 8 18 11 6 6 11 11 10 21 6 5 31 19 6 27 25 18 26 24 12 7 5 6 29 48 37 18 15 7 11 14 4 22 23 19 14 16 13 27 24 40 40 21 5 3 11 9 3 5 5 6 5 7 5 3 3 4 18 28 9 24 19 6 3 5 3 27 23 7 10 11 20 18 6 15 5 9 12 28 21 7 10 23 10 4 10 5 13 18 16 23 4 16 8 4 3 8 25 6 4 1 1 8 7 10 16 9 5 18 8 16 8 23 30 17 4 9 13 1 3 3 4 5 4 15 4 4 3	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr4_34263245_34264411
seq2: B6Ng01-288B04.g_75_1231 (reverse)

seq1  TAATTA-CCGCAG---AACATGTCATCCCAGTTCAATTAATGGATAATTT  46
      |||||| ||||||   |||| ||||| |||| |||||||||||||| || 
seq2  TAATTACCCGCAGAGAAACA-GTCAT-CCAG-TCAATTAATGGATAGTT-  46

seq1  TTAAATATATGGATAAAAGTTTAGAATTTCCCAATCCTGTGG--CAATCC  94
            ||| ||||||| |  ||||   | || || ||||||  ||||| 
seq2  ----CAATACGGATAAAGG--TAGA---TACC-ATTCTGTGGGCCAATC-  85

seq1  AAACAATA-CTGTGATAAGTAAGCTATTTAC-TGGGAGATGAGAATCTCC  142
       ||||||| ||||||||||| ||||||| || ||||||||||| ||||||
seq2  -AACAATACCTGTGATAAGTTAGCTATTAACTTGGGAGATGAG-ATCTCC  133

seq1  GTGGATAAGGGGGTCTGCTGAGAGGAAGTTTTCTTCAGTGGAATGCCACT  192
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  GTGGATAAGGGGGTCTGCTGAGAGGAAG-TTTCTTCAGTGGAATG-CACT  181

seq1  -GGCTAAACCAACCACACTCTGGGGCTGT-CCATGCTCAGGAGTCATTGA  240
       |||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGGCTAAACCAACCACACTCTGGGGCTGTCCCATGCTCAGGAGTCATTGA  231

seq1  CCAACGCAAATCATACTCCATGAAT-ATCAGTGGCTTTTTTTTTTCATTT  289
      ||||||||||||||||||||||||| |||||||||  |||||||||||||
seq2  CCAACGCAAATCATACTCCATGAATAATCAGTGGC--TTTTTTTTCATTT  279

seq1  TTTTTTTCTTTTAGAGTAGGTATGAACAG-AAAATTGGGTAAGGAGGAGA  338
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  TTTTTTTC-TTTAGAGTAGGTATGAACAGAAAAATTGGGTAAGGAGGAGA  328

seq1  GGGTTTAGGGAGAGTTGGAGGATGGGGAAAATATGATAAAAACATACAGA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTAGGGAGAGTTGGAGGATGGGGAAAATATGATAAAAACATACAGA  378

seq1  TGAAATTCTCAAAAAATAACATTTTAAAAAGGAAATAAATATTTAGAAGT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCTCAAAAAATAACATTTTAAAAAGGAAATAAATATTTAGAAGT  428

seq1  AGAGTTGATGGGTCAAAGGTGTGTTTGCCCTTTCTAAACTTTGATTAAGT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGATGGGTCAAAGGTGTGTTTGCCCTTTCTAAACTTTGATTAAGT  478

seq1  ACTGCATCTGGAAGCATGGAGGCTAACACGCGAACAACATTCCTACTGTC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATCTGGAAGCATGGAGGCTAACACGCGAACAACATTCCTACTGTC  528

seq1  CTGCCTGAGCCATCAAATGCTTCTGCAATGTGACAAGTAGGAAACCGGTC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGAGCCATCAAATGCTTCTGCAATGTGACAAGTAGGAAACCGGTC  578

seq1  TTGGCATGTTTATTTTGTCTTTTTTTGCTTAGGAAACCCTCCCCTAACCC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATGTTTATTTTGTCTTTTTTTGCTTAGGAAACCCTCCCCTAACCC  628

seq1  CGTGTTGGACTTTCTTTTCTGTCCACTGCCATCCTTCTCTCATGTTAATG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTGGACTTTCTTTTCTGTCCACTGCCATCCTTCTCTCATGTTAATG  678

seq1  GATTTCAGACCTTTCTCTTACTGATATATTACTCTTCACATATTAGGAAG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCAGACCTTTCTCTTACTGATATATTACTCTTCACATATTAGGAAG  728

seq1  ATCAAATTTATCGACAGGCTTTAAAATGTCTATACATCAGTTTCTCCTGG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTTATCGACAGGCTTTAAAATGTCTATACATCAGTTTCTCCTGG  778

seq1  TTCTGGCCATAAGTTGATGTGGTTTTTTTAAAATATGATTTTAGAACTAC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCCATAAGTTGATGTGGTTTTTTTAAAATATGATTTTAGAACTAC  828

seq1  CCTAAATGCTTCTAAAGTTCTGATTAAAATAATTTTAAATATCATAGGCC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATGCTTCTAAAGTTCTGATTAAAATAATTTTAAATATCATAGGCC  878

seq1  CGATCTGCATCTTCTTAGACAAAAAAAAAAAGTAAAATTTTATATCAGAT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCTGCATCTTCTTAGACAAAAAAAAAAAGTAAAATTTTATATCAGAT  928

seq1  CTGATTGAAATGTTCTTGGCTGCACATCAAATTGCCACATATTTAGCCAT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGAAATGTTCTTGGCTGCACATCAAATTGCCACATATTTAGCCAT  978

seq1  TTAAAACAACACCTGCTTGTCTCAAATTTTCTCTGGAGTCTGAATGTGGC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACAACACCTGCTTGTCTCAAATTTTCTCTGGAGTCTGAATGTGGC  1028

seq1  TCAGCTGGATCCTCTGAAAAAGTCTTCATCAACACTGTGATTAAGATATC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGGATCCTCTGAAAAAGTCTTCATCAACACTGTGATTAAGATATC  1078

seq1  GACCAGGCCTGGGGTGTGACCTGTGGACAGAACAGGGTAAAAGCCTACCT  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGCCTGGGGTGTGACCTGTGGACAGAACAGGGTAAAAGCCTACCT  1128

seq1  CGATGCTCAGGCAGGTGTTAGGAGAATTC  1167
      |||||||||| ||||||||||||||||||
seq2  CGATGCTCAGACAGGTGTTAGGAGAATTC  1157

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information