MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-288J21
Chromosome	4 (Build37)
Map Location	121,508,128 - 121,509,287
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Rims3, LOC626489, 3110037I16Rik, Zfp69, Smap1l, Col9a2, Zmpste24, Tmco2, LOC100042174, Rlf, OTTMUSG00000008911, EG666914, LOC666921, LOC666927
Downstream gene	LOC666931, LOC666937, LOC633269, LOC633279, 9530002B09Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rims3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242662 MGI:2443331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC626489 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	3110037I16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73172 MGI:1920422
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp69 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381549 MGI:107794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smap1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69780 MGI:1917030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col9a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12840 MGI:88466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zmpste24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230709 MGI:1890508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmco2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69469 MGI:1916719
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042174 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042174
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Rlf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109263 MGI:1924705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	OTTMUSG00000008911 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545677 MGI:3652130
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666914 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666914 MGI:3648197
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC666921 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC666927 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC666931 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins

name	LOC666937 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 79 ESTs, 23 Proteins pseudo : _no_value

name	LOC633269 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633269
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	LOC633279 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633279
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	9530002B09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77432 MGI:1924682
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rims3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130708 GeneID:242662 MGI:2443331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulating synaptic membrane exocytosis 3 transcript_id : NM_182929.2

name	3110037I16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312138 GeneID:73172 MGI:1920422
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110037I16 gene transcript_id : NM_028457.1

name	Zfp69 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131096 GeneID:381549 MGI:107794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 69 transcript_id : NM_001005788.2

name	Smap1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981559 GeneID:69780 MGI:1917030
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stromal membrane-associated protein 1-like transcript_id : NM_133716.2

name	Col9a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680977 GeneID:12840 MGI:88466
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type IX, alpha 2 transcript_id : NM_007741.1

name	Zmpste24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129981 GeneID:230709 MGI:1890508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc metallopeptidase, STE24 homolog (S. cerevisiae) transcript_id : NM_172700.2

name	Tmco2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486794 GeneID:69469 MGI:1916719
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane and coiled-coil domains 2 transcript_id : NM_001081312.1

name	Rlf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486603 GeneID:109263 MGI:1924705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : rearranged L-myc fusion sequence transcript_id : NM_001081013.1

name	OTTMUSG00000008911 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386171 GeneID:545677 MGI:3652130
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000008911 transcript_id : NM_001033791.2

name	EG666914 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252887 GeneID:666914 MGI:3648197
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG666914 transcript_id : XM_986980.2

name	LOC666921 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94372249 GeneID:666921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical LOC666921 transcript_id : XM_987018.1

name	LOC666927 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252889 GeneID:666927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical LOC666927 transcript_id : XM_987049.2

name	LOC666931 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253078 GeneID:666931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : hypothetical LOC666931 transcript_id : XM_987080.2

name	LOC633269 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94372500 GeneID:633269
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : similar to urea transporter transcript_id : XM_987282.1

name	LOC633279 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94372502 GeneID:633279
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to AUMP transcript_id : XM_987307.1

name	9530002B09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115292435 GeneID:77432 MGI:1924682
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9530002B09 gene transcript_id : NM_023865.3

name	Rims3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859823 CCDS:CCDS18595.1 GeneID:242662 MGI:2443331
definition	GO_component : GO:0045202 - synapse [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : regulating synaptic membrane exocytosis 3 protein_id : NP_891559.1

name	3110037I16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312139 CCDS:CCDS18596.1 GeneID:73172 MGI:1920422
definition	codon_start : 1 product : hypothetical protein LOC73172 protein_id : NP_082733.1

name	Zfp69 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54261738 CCDS:CCDS18597.1 GeneID:381549 MGI:107794
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : Zfp63p product : zinc finger protein 69 protein_id : NP_001005788.1

name	Smap1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981560 CCDS:CCDS18598.1 GeneID:69780 MGI:1917030
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0043087 - regulation of GTPase activity [Evidence IEA] codon_start : 1 note : novel protein containing a putative GTPase activating protein for Arf domain product : stromal membrane-associated protein 1-like protein_id : NP_598477.2

name	Col9a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680978 CCDS:CCDS18599.1 GeneID:12840 MGI:88466
definition	GO_component : GO:0005581 - collagen [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0030020 - extracellular matrix structural constituent conferring tensile strength [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : procollagen, type IX, alpha 2 protein_id : NP_031767.1

name	Zmpste24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370012 CCDS:CCDS18600.1 GeneID:230709 MGI:1890508
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IDA] [Evidence IMP]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006998 - nuclear membrane organization and biogenesis [Evidence IMP] [Evidence IGI]; GO:0030327 - prenylated protein catabolism [Evidence IDA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : farnesylated-proteins converting enzyme 1 product : zinc metalloproteinase, STE24 homolog protein_id : NP_766288.1

name	Tmco2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486795 GeneID:69469 MGI:1916719
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : transmembrane and coiled-coil domains 2 protein_id : NP_001074781.1

name	Rlf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486604 GeneID:109263 MGI:1924705
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004182 - carboxypeptidase A activity [Evidence IEA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : rearranged L-myc fusion sequence protein_id : NP_001074482.1

name	OTTMUSG00000008911 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702113 GeneID:545677 MGI:3652130
definition	codon_start : 1 product : hypothetical protein LOC545677 protein_id : NP_001028963.1

name	EG666914 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252888 GeneID:666914 MGI:3648197
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992074.2

name	LOC666921 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94372250 GeneID:666921
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992112.1

name	LOC666927 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252890 GeneID:666927
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992143.2

name	LOC666931 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253079 GeneID:666931
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992174.2

name	LOC633269 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94372501 GeneID:633269
definition	codon_start : 1 product : similar to urea transporter protein_id : XP_992376.1

name	LOC633279 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94372503 GeneID:633279
definition	codon_start : 1 product : similar to AUMP protein_id : XP_992401.1

name	9530002B09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14010845 CCDS:CCDS18603.1 GeneID:77432 MGI:1924682
definition	codon_start : 1 note : palmitoyl protein thioesterase-like protein; ventral prostrate predominant 1 product : palmitoyl-protein thioesterase-like protein protein_id : NP_076354.1

name	LOC626489 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626489
definition	number : 1 pseudo : _no_value

name	LOC100042174 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042174
definition	number : 2 pseudo : _no_value

name	LOC100042174 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042174
definition	number : 1 pseudo : _no_value

name	LOC666937 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253080 GeneID:666937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 79 ESTs, 23 Proteins product : similar to creatine kinase pseudo : _no_value transcript_id : XR_030521.1

clone name	MSMg01-095P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506B06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-541G10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-432A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133E04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-358N19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-413G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051I18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-432A19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-388L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184D15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-490C15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-076A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046D10
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-288J21.b	B6Ng01-288J21.g
ACC	GA086235	GA086236
length	1,167	568
definition	B6Ng01-288J21.b	B6Ng01-288J21.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctttgttcagttctgagccccattttttaacggggttatttgatt ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga tccacttagatttgaccttagtacaaggagataagtatggatcgattggc attcttctacacgataacaaccagttgtgcttatcatcatcactatcatc atcatcatgtcctccagaaggtacctactaaacaaataaatataggttaa aaaattagaatagccaggagctggtggcacaggactttaatccaacactc ctgaggctaactatgacctattattttctgccatattccaagactgctag caccccacacagaaaggcagtctgaaataaaaccataaaacaaacaaaca gccccactgcaaacaagttatttatctatgtatttattatttattcattt attaagagggctggagagatagctcactggtcaaagagtactcatacaga ggtggctaacaattcctgtaactcgagcttgagatgatgtgatgaccctc ctcgaatctctggggacactgaaacacatgcattcatgaccactccaaca catacacacatatacgcaaataactaacaaaaaaaattaaaaaaaaaaaa gaatcaggggcaagtggactatgccaccagacaaaactggcaatattgaa acaggtttaaaccctggtagatttcataatcgaggaaaataggtgtaacc caggtcgtagctaagctgtacctgtcctgggacatatgacagtgacattt cataggaggacccataactagctagtcatagggacaacacctgagtccct tccccttgaaataatcatcgcttaaagtatattgcgactggaggcaatgg gagccatctacactcct	tccctaactctcttctccaagtcctgagagtaaaggcacatgtcaataca ctctacttctccaactattcttgaaggaaatttgatcaaacagttgcatc taggtgtcaaataaatagtaaatttaaagccatattaggtccttgtaggt tcttgggtttttgtttgtttgtttgtttggttggttggtttttgtttgtt ttacttggagagagcattgggaggagtaagagaggtcactgtttcagtta aaaacatattgtttttaaaaaagaaaatgctgtaaatgaatttctgttaa cctgttaacctgaaaataaatattaccccaggccttggagaagagataaa tggtggtgggtaggatatggaaaatgtatggtacagcaacacttaaccat gtcagtaaggtcaagaaagtatgccatggaaaagatacaatcctagggga tgaaataaggcaaggacatacaggcttgggcctgccttgtgttaggatca tatgtgtgtaaacagacacagaaggtccttatcttcatagagctgaaagc ctagcaaaggacatggtc
quality values	Open. Hide. 58 29 26 19 58 54 54 52 48 45 42 46 23 18 12 19 27 29 39 43 50 50 56 56 56 56 39 42 42 33 32 35 44 26 26 44 35 39 45 50 38 36 38 32 34 50 51 47 46 59 59 59 59 59 59 62 39 30 41 43 39 43 43 51 51 49 51 49 51 51 46 46 51 49 51 51 50 28 30 27 23 34 30 49 59 50 50 56 51 59 51 51 49 46 46 34 50 56 51 56 51 49 51 51 49 49 50 59 51 59 46 46 18 41 43 27 27 24 59 49 51 56 51 51 59 59 51 51 50 50 50 50 50 50 49 49 51 50 49 59 49 46 56 51 41 56 51 49 49 59 56 56 50 56 49 43 40 46 46 43 59 48 56 51 34 28 28 27 38 43 50 50 54 56 56 51 43 49 50 50 50 34 34 18 33 46 41 51 51 46 49 49 46 56 46 51 51 49 51 51 56 51 51 34 59 49 43 46 46 49 50 56 51 56 49 49 24 30 40 43 34 34 51 34 56 59 51 50 46 43 51 43 34 49 41 41 34 34 34 40 36 40 49 49 59 46 50 59 49 51 49 49 51 43 43 43 36 27 56 48 40 39 40 41 41 43 49 43 43 43 43 46 39 51 49 46 46 39 51 49 59 56 51 43 49 30 41 43 59 51 59 59 59 56 50 50 51 43 36 39 49 49 43 49 43 51 51 51 51 62 62 51 51 56 34 51 43 39 43 43 34 45 59 45 51 51 51 51 51 56 41 45 43 43 51 43 50 34 38 45 43 39 39 30 31 30 30 34 45 43 56 51 51 43 59 59 59 44 38 59 51 45 51 43 44 43 39 41 43 34 24 30 56 45 41 43 32 56 51 42 47 51 51 51 32 42 42 42 51 56 44 51 38 26 42 35 35 51 35 32 42 51 51 32 32 28 32 30 24 39 32 38 25 56 51 51 51 56 42 51 51 39 39 33 42 51 62 56 56 56 56 42 51 42 42 33 39 42 33 42 39 30 34 32 33 39 33 56 56 56 43 56 37 33 39 39 34 39 56 50 56 43 39 42 42 31 17 56 56 27 56 32 42 38 38 35 42 38 35 42 34 35 42 28 46 43 38 42 43 35 39 43 52 44 43 48 43 38 38 50 50 50 47 43 50 52 42 23 50 42 46 50 25 40 42 29 32 32 39 22 32 39 41 52 42 48 40 37 37 27 24 16 28 30 22 48 50 52 46 52 52 41 29 35 50 52 42 38 35 40 47 50 46 41 22 43 41 41 46 46 42 41 42 50 42 42 39 34 37 42 52 41 52 37 40 40 35 46 35 42 39 38 37 46 50 48 47 46 33 36 30 33 43 35 46 50 47 47 33 28 50 31 27 27 33 37 27 33 48 48 49 40 52 40 28 40 53 42 42 32 35 46 47 42 48 39 39 46 29 32 37 37 35 39 33 50 40 46 50 42 48 39 41 37 32 19 23 26 32 42 25 28 33 23 26 22 40 40 33 28 26 40 40 41 23 26 35 41 39 50 42 39 39 41 40 33 28 36 32 35 29 32 41 40 40 47 31 37 50 37 40 37 41 47 41 45 39 45 41 40 37 40 37 33 29 18 49 18 29 30 21 32 32 25 37 24 46 33 38 25 52 31 34 40 32 35 39 40 29 37 31 20 17 54 47 37 51 42 34 40 34 45 34 40 52 39 40 32 33 33 15 33 37 40 40 31 31 23 49 19 14 23 33 45 34 28 32 51 32 46 31 39 53 45 24 27 29 40 40 29 36 38 22 26 20 32 31 30 40 32 32 35 37 31 22 11 24 24 27 27 52 27 19 21 32 35 31 32 32 31 31 31 32 24 30 30 21 32 23 42 31 43 40 15 25 27 29 26 35 29 30 18 32 18 23 23 30 31 43 31 31 27 31 45 34 36 22 14 25 24 30 10 38 12 31 19 31 23 31 6 33 26 43 31 29 9 29 24 32 9 31 6 33 28 31 16 32 20 18 30 42 30 32 33 17 12 13 12 21 19 17 18 18 11 18 18 18 28 21 6 5 15 10 25 19 9 10 38 25 37 24 21 5 19 12 31 32 12 11 19 22 26 15 14 22 31 31 24 27 26 26 9 9 21 35 28 10 21 33 31 18 31 15 16 22 21 24 32 31 38 13 17 14 13 16 27 25 14 17 22 29 19 32 31 21 21 14 5 10 10 12 18 36 21 22 33 34 20 20 25 30 14 27 11 10 37 34 31 26 15 9 18 13 14 23 22 17 9 19 26 15 30 19 19 15 20 16 31 33 13 22 26 9 26 9 30 19 29 11 13 14 17 8 16 21 11 15 18 21 16 20 6 6 5 7 10 14 18 20 9 13 6 6 7 8 10 15 13 22 18 17 7 18 7 8 6 27 10 27 11 10 27 13 14 24 17 28 13 6 13 11 25 10 20 13 8 16 16 11 5 7 19 6 11 5 16 8 14 4 14 22 13 6 3 3 4 14 18 11 15 7 10 18 26 3 2 3 4 3 2 7 14 7 13 2 8 7 7 21 4 8 4 7 26 25 9 8 4 4 5 4 7 11 6 7 7 13 5 6 10 7 7 4 4 5 3 6 5 14 26 2 2 3 4 5 7 5 2 5 7 7 5 7 14 5 10 2	Open. Hide. 51 51 59 51 44 43 30 37 36 28 34 43 48 32 45 43 36 27 30 39 41 49 49 49 51 50 59 39 59 43 51 43 51 51 49 59 56 51 59 51 59 59 49 43 41 40 51 43 59 43 48 50 48 30 50 51 56 56 56 40 50 44 48 50 50 59 59 56 38 56 50 56 59 59 56 49 59 59 59 59 59 59 56 50 59 59 51 43 49 51 51 49 56 56 59 56 51 43 56 50 49 51 43 59 56 48 40 50 43 43 51 49 43 51 43 51 56 46 46 59 56 59 59 59 51 51 56 51 51 51 56 49 56 51 56 59 59 43 59 50 56 56 51 56 59 34 34 23 50 43 49 51 43 43 56 46 56 56 59 56 48 48 50 56 56 40 43 37 40 40 38 36 32 43 50 43 46 45 45 35 34 35 38 43 34 41 49 43 34 49 49 35 43 13 13 13 13 18 13 13 12 10 10 10 8 27 30 38 49 27 48 45 56 40 49 43 50 43 51 50 56 54 56 59 59 56 59 59 59 50 62 49 62 56 62 48 56 56 59 59 62 59 56 56 56 49 34 51 51 46 51 51 51 56 59 51 59 50 56 59 62 59 59 59 59 59 56 59 59 59 56 56 45 62 59 59 59 46 56 56 56 56 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 56 62 59 49 51 50 56 50 45 48 59 59 59 59 59 62 62 54 62 59 62 59 62 62 62 62 62 49 43 50 50 59 51 51 59 59 56 46 59 59 39 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 59 56 56 56 49 56 54 59 59 62 62 62 62 62 56 50 49 46 39 43 59 59 56 38 43 40 30 18 23 20 20 28 18 18 34 19 50 39 36 28 28 23 38 18 15 15 25 41 41 49 25 35 34 34 34 35 28 43 28 25 18 23 13 23 18 13 13 10 18 25 17 23 23 23 43 23 30 40 43 49 39 25 14 15 13 13 18 13 43 46 30 46 43 46 28 23 18 16 9 8 6 18 6 13 46 27 24 29 24 28 16 31 22 14 15 43 12 18 18 23 18 13 23 30 30 41 30 24 19 19 16 8 13 17 11 16 11 24 23 11 11 12 30 30 10 21 21 25 30 30 8 13 7 7 15 13 18 22 16 11 14 7 10 11 9 8 24 14 10 15 22 15 20 15 19 29 32 16 14 27 11 11 11 8 10 10 5 15 13 7 14 20 12 26 31 15 11 11 10 13 7 20 24 10 10 22 25 20 14 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_121508128_121509287
seq2: B6Ng01-288J21.b_44_1210 (reverse)

seq1  AGGA--GTAGATGCTTCCCATTGGCT-CAGTC-TGATATA---TTAGGGA  43
      ||||  |||||||  |||||||| || |||||   |||||   | || ||
seq2  AGGAGTGTAGATGGCTCCCATTGCCTCCAGTCGCAATATACTTTAAGCGA  50

seq1  TGATTTATTTTCAAAGGGAAGGACTTCAGGTGTTGT-CCTATGACT-GGT  91
      |||||   |||||| |||||||   ||||||||||| ||||||||| | |
seq2  TGATT--ATTTCAAGGGGAAGGGACTCAGGTGTTGTCCCTATGACTAGCT  98

seq1  AGTTAT-GGTCCTCCTAATGAAATGTCACTGTCATATGTCCCAGGACAGG  140
      |||||| ||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTTATGGGTCCTCCT-ATGAAATGTCACTGTCATATGTCCCAGGACAGG  147

seq1  TACAGCTTAGCTACGACCTGGGTTACACCTATTTTCCTCGATTATGAAAT  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTTAGCTACGACCTGGGTTACACCTATTTTCCTCGATTATGAAAT  197

seq1  CTACCAGGGTTTTAAACCTGTTTCAATATTGCCAGTTTTGTCTGGTGGCA  240
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAGGG-TTTAAACCTGTTTCAATATTGCCAGTTTTGTCTGGTGGCA  246

seq1  TAGTCCACCTGCCCCTGATTC-TTTTTTTTTTTAATTTTTTTTGTTAGTT  289
      |||||||| |||||||||||| ||||||||||||||||||||||||||||
seq2  TAGTCCACTTGCCCCTGATTCTTTTTTTTTTTTAATTTTTTTTGTTAGTT  296

seq1  ATTTGTGTATATGTGTGTATGTGTTGGAGTGGTCATGAATGCATGTGTTT  339
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCGTATATGTGTGTATGTGTTGGAGTGGTCATGAATGCATGTGTTT  346

seq1  CAGTGTCCCCAGAGATTCGAGGAGGGTCATCACATCATCTCAAGCTCGAG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCCCCAGAGATTCGAGGAGGGTCATCACATCATCTCAAGCTCGAG  396

seq1  TTACAGGAATTGTTAGCCACCTCTGTATGAGTACTCTTTGACCAGTGAGC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGAATTGTTAGCCACCTCTGTATGAGTACTCTTTGACCAGTGAGC  446

seq1  TATCTCTCCAGCCCTCTTAATAAATGAATAAATAATAAATACATAGATAA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCCAGCCCTCTTAATAAATGAATAAATAATAAATACATAGATAA  496

seq1  ATAACTTGTTTGCAGTGGGGCTGTTTGTTTGTTTTATGGTTTTATTTCAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTGTTTGCAGTGGGGCTGTTTGTTTGTTTTATGGTTTTATTTCAG  546

seq1  ACTGCCTTTCTGTGTGGGGTGCTAGCAGTCTTGGAATATGGCAGAAAATA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTTTCTGTGTGGGGTGCTAGCAGTCTTGGAATATGGCAGAAAATA  596

seq1  ATAGGTCATAGTTAGCCTCAGGAGTGTTGGATTAAAGTCCTGTGCCACCA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTCATAGTTAGCCTCAGGAGTGTTGGATTAAAGTCCTGTGCCACCA  646

seq1  GCTCCTGGCTATTCTAATTTTTTAACCTATATTTATTTGTTTAGTAGGTA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGGCTATTCTAATTTTTTAACCTATATTTATTTGTTTAGTAGGTA  696

seq1  CCTTCTGGAGGACATGATGATGATGATAGTGATGATGATAAGCACAACTG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGGAGGACATGATGATGATGATAGTGATGATGATAAGCACAACTG  746

seq1  GTTGTTATCGTGTAGAAGAATGCCAATCGATCCATACTTATCTCCTTGTA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTATCGTGTAGAAGAATGCCAATCGATCCATACTTATCTCCTTGTA  796

seq1  CTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACA  846

seq1  CTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAC  896

seq1  AGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGA  946

seq1  GAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAA  996

seq1  GACACCATCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCATCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTT  1046

seq1  TACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAAC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAAC  1096

seq1  TCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCGTTAAAAAATGGGGC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCGTTAAAAAATGGGGC  1146

seq1  TCAGAACTGAACAAAGAATTC  1160
      |||||||||||||||||||||
seq2  TCAGAACTGAACAAAGAATTC  1167

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information