BAC Information

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BAC

Clone NameB6Ng01-289I06
Chromosome4 (Build37)
Map Location 75,073,512 - 75,074,598
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040258, LOC100039814, LOC636847, 3110001D03Rik, LOC623529, LOC100039833
Downstream geneLOC100039884, LOC667845, Ptprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289I06.bB6Ng01-289I06.g
ACCGA086893GA086894
length2751,092
definitionB6Ng01-289I06.b B6Ng01-289I06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
accatatgaacaaactgaaagaaaaaattacacagtcatctcattagatg
ctgaaaaaccattgataaaatccagcacttcttcatgttaaaagtcttat
agaggtaaggatacaaggcacatatataggctggtccatggccagaggca
catatgtagtggaagactgtattttcttcatccttcagagagaggatgtg
cctaatcctgtagaaaattgatgtcatcaggaagggggatgctggattgg
gtgaggtagggtaggtaagtggatg

gaattcaaacatgaatgaaataatagaatattcagaaggtctgctgagct
tgtctctttgatggacagttacatgttcattataatttgaagcaactgag
tactgcttatatagtcagtggatgaagagaaaggtaagtctataattgag
cattacaaaatcattaccaaacaaagcacattctaatgtaactcagttat
atctcaatgatgggactcagtggataatgactgtatacttttattttcca
tttggaaaatattttgtgttctgtaaaccagagaaaatatagttcagtgg
aaacagcattggattggtggcataaagatatattatatcccagttctgcc
atgtggtagttgaatgacctgggaaataattggacttttttggtttcctt
attttcatgacctgagagatttgggatagatgatcctaactacaaaagtc
caagattctaatttaaattaccaagtgaggtctttaaatcagccaaaaca
tggtgtctgagatgctcatttcaaatttgctacatttgagaagtacttat
taatcctctcattctgttttgatcttaatattaacatttagatctaaagt
gaatgtttaagaagctgatattaagagcgttcattgtttaaatggcagga
aaagtgcacacacattgtttcttttaaatgatgcttttttttcttcatct
taaagcttgttcctcacgtgtattactctgagatctccaagacttgcctg
tttctaagcacatctgtagttacacttgtgaaagtaagagattagtccag
agaattctcgaataaaacctacagtgggagaaaaggaagctaggcttgaa
acacaggagaagcagctctgcttcaataaccaggaagccacgggttttaa
tcaagctttgaaattcaagctcaagtgtatctatgtttaaaagcaatggt
gttctagcatttttctaactatttcttttgaattgaatacaacagtgatt
ttgattcactattacccctgtgtgctttggccggtaagaagttgtcgtat
gcttgaaggaaacaaaagaaaccttgcagttccctttgctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_75073512_75074598
seq2: B6Ng01-289I06.g_69_1160

seq1  GAATTCAAACATGAATGAAATAATAGAATATTCAGAAGGTCTGCTGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACATGAATGAAATAATAGAATATTCAGAAGGTCTGCTGAGCT  50

seq1  TGTCTCTTTGATGGACAGTTACATGTTCATTATAATTTGAAGCAACTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTTGATGGACAGTTACATGTTCATTATAATTTGAAGCAACTGAG  100

seq1  TACTGCTTATATAGTCAGTGGATGAAGAGAAAGGTAAGTCTATAATTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTTATATAGTCAGTGGATGAAGAGAAAGGTAAGTCTATAATTGAG  150

seq1  CATTACAAAATCATTACCAAACAAAGCACATTCTAATGTAACTCAGTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAAAATCATTACCAAACAAAGCACATTCTAATGTAACTCAGTTAT  200

seq1  ATCTCAATGATGGGACTCAGTGGATAATGACTGTATACTTTTATTTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAATGATGGGACTCAGTGGATAATGACTGTATACTTTTATTTTCCA  250

seq1  TTTGGAAAATATTTTGTGTTCTGTAAACCAGAGAAAATATAGTTCAGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAATATTTTGTGTTCTGTAAACCAGAGAAAATATAGTTCAGTGG  300

seq1  AAACAGCATTGGATTGGTGGCATAAAGATATATTATATCCCAGTTCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCATTGGATTGGTGGCATAAAGATATATTATATCCCAGTTCTGCC  350

seq1  ATGTGGTAGTTGAATGACCTGGGAAATAATTGGACTTTTTTGGTTTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTAGTTGAATGACCTGGGAAATAATTGGACTTTTTTGGTTTCCTT  400

seq1  ATTTTCATGACCTGAGAGATTTGGGATAGATGATCCTAACTACAAAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATGACCTGAGAGATTTGGGATAGATGATCCTAACTACAAAAGTC  450

seq1  CAAGATTCTAATTTAAATTACCAAGTGAGGTCTTTAAATCAGCCAAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTCTAATTTAAATTACCAAGTGAGGTCTTTAAATCAGCCAAAACA  500

seq1  TGGTGTCTGAGATGCTCATTTCAAATTTGCTACATTTGAGAAGTACTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCTGAGATGCTCATTTCAAATTTGCTACATTTGAGAAGTACTTAT  550

seq1  TAATCCTCTCATTCTGTTTTGATCTTAATATTAACATTTAGATCTAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTCTCATTCTGTTTTGATCTTAATATTAACATTTAGATCTAAAGT  600

seq1  GAATGTTTAAGAAGCTGATATTAAGAGCGTTCATTGTTTAAATGGCAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTTAAGAAGCTGATATTAAGAGCGTTCATTGTTTAAATGGCAGGA  650

seq1  AAAGTGCACACACATTGTTTCTTTTAAATGATGCTTTTTTTTCTTCATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCACACACATTGTTTCTTTTAAATGATGCTTTTTTTTCTTCATCT  700

seq1  TAAAGCTTGTTCCTCACGTGTATTACTCTGAGATCTCCAAGACTTGCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTGTTCCTCACGTGTATTACTCTGAGATCTCCAAGACTTGCCTG  750

seq1  TTTCTAAGCACATCTGTAGTTACACTTGTGAAAGTAAGAGATTAGTCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAGCACATCTGTAGTTACACTTGTGAAAGTAAGAGATTAGTCCAG  800

seq1  AGAATTCTCGAATAAAACCTACAGT-GGAGAAAAGGAAGCTAGGCTTGAA  849
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGAATTCTCGAATAAAACCTACAGTGGGAGAAAAGGAAGCTAGGCTTGAA  850

seq1  ACACAGGAGAAGCAGCTCTGCTTCCAATAACCAGGAAGCCACGGGTTTTA  899
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACACAGGAGAAGCAGCTCTGCTT-CAATAACCAGGAAGCCACGGGTTTTA  899

seq1  ATCAAGCTTTGAAATTCAAGCTCAAGTGTATCTATGTTTAAAAGCAATGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCTTTGAAATTCAAGCTCAAGTGTATCTATGTTTAAAAGCAATGG  949

seq1  TG-TCTAGCA-TTTTCTAACTA-TTCTTTTGAATTGAATAC-ACAGTGAT  995
      || ||||||| ||||||||||| |||||||||||||||||| ||||||||
seq2  TGTTCTAGCATTTTTCTAACTATTTCTTTTGAATTGAATACAACAGTGAT  999

seq1  TTGATTTCACCTATTA-CCCTGTGTGCTTTGGGCCGGTAAGAGTTGGTCG  1044
      ||   |||| |||||| ||||||||||||| |||||||||||  | ||||
seq2  TTTGATTCA-CTATTACCCCTGTGTGCTTT-GGCCGGTAAGAAGTTGTCG  1047

seq1  TATGCTTGAAAGAAAC-AAAGAAACCTTGCAGTT-CCTTTGCTGA  1087
      |||||||||| ||||| ||||||||||||||||| ||||||||||
seq2  TATGCTTGAAGGAAACAAAAGAAACCTTGCAGTTCCCTTTGCTGA  1092


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