BAC Information

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BAC

Clone NameB6Ng01-289I16
Chromosome4 (Build37)
Map Location 70,824,991 - 70,825,671
singlet/doubletsinglet
Overlap genenone
Upstream geneCdk5rap2, Megf9, LOC100039565
Downstream geneLOC100039979, LOC667638, EG667649, Tle1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289I16.bB6Ng01-289I16.g
ACCGA086910GA086911
length1,201878
definitionB6Ng01-289I16.b B6Ng01-289I16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatgtctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcacagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctctattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatcctgcaatacctctcctgggc
atatatccagaagatgccctaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatgtatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttattaaattcctagccaa
atggatggacctggagggcattatcctgaataaggtaacacattcacaaa
ggaactcacataatgtgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgccactccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aagaatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgttgctgtctcttgtgagactgtgctggggcctagcaaac
acagaagtggatgctcacagtcagctaatgggatggatcacagggctccc
aatggaggagctagagaaagtacccaggagctaaagggatctgcaaccct
ataggtggaacacattatgaactaaccagtaccccggactcttgactcta
gctgcatattgtatcaaagatggcctagtcgcatcactggaaggagaggc
cattggaacacgcaacttatatgcccagtacaggggacgcccaagcaaag
gggaagtgggttggggtaggggaatactcctgtacttctagctcatcagt
c

gaattctcttcttttcttcccatattattagaatattatccagtaacctg
aacagattacaaaatgcccaatccaattgtctttctagaccgacgagcag
gtatatctctgcctatcttaaacactgattagttcttactaaactctctt
gcaattgctctggtaacttccaaacaacgaacatacataaaattgggggc
aactcactaaccttctctaatttagtgttatttccctgttcatgatctta
gattttcctggttatagttttccatttcacctcacatgtctctccaagcc
tatgtagttgtcttattcctatactttttgaaaaaataatattttttaca
tttgttcctacattcaaactcaattcctttatggggtttacaattctaga
aaataaattctaaatccttagtctagaaaatggaatcattcttagttttc
actcttttgtacttcatattcaagctctactggagaaactgtatagtgca
aagaaatgtttttggagtgtgaagcaataaatgagacataaatattccat
atcctccctgtgacattaaaagaacatcatttaatagtgaaagatttcag
gaggtagaggtcatcaaaaactgaaactaaacagtgtctctagtcatgat
aagtgctacactcataaactaacagcatccatggataccttcacaagaac
tccataagatcaagtcaatcaatattccatcctggatcggcagaaactca
caattccctatacctaagatgaagactttttaaagttaatgtttatttgg
aagacaagtagtttccttaagtgtgtttcccttgataagctaataattcg
ccaattggtgatgtcataattatcatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70824991_70825671
seq2: B6Ng01-289I16.g_70_750 (reverse)

seq1  TGGATGCTGTTAGTTTATGAGTGTAGCACTTATCATGACTAGAGACACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCTGTTAGTTTATGAGTGTAGCACTTATCATGACTAGAGACACTG  50

seq1  TTTAGTTTCAGTTTTTGATGACCTCTACCTCCTGAAATCTTTCACTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTCAGTTTTTGATGACCTCTACCTCCTGAAATCTTTCACTATTA  100

seq1  AATGATGTTCTTTTAATGTCACAGGGAGGATATGGAATATTTATGTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGTTCTTTTAATGTCACAGGGAGGATATGGAATATTTATGTCTCA  150

seq1  TTTATTGCTTCACACTCCAAAAACATTTCTTTGCACTATACAGTTTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGCTTCACACTCCAAAAACATTTCTTTGCACTATACAGTTTCTCC  200

seq1  AGTAGAGCTTGAATATGAAGTACAAAAGAGTGAAAACTAAGAATGATTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGCTTGAATATGAAGTACAAAAGAGTGAAAACTAAGAATGATTCC  250

seq1  ATTTTCTAGACTAAGGATTTAGAATTTATTTTCTAGAATTGTAAACCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAGACTAAGGATTTAGAATTTATTTTCTAGAATTGTAAACCCCA  300

seq1  TAAAGGAATTGAGTTTGAATGTAGGAACAAATGTAAAAAATATTATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAATTGAGTTTGAATGTAGGAACAAATGTAAAAAATATTATTTTT  350

seq1  TCAAAAAGTATAGGAATAAGACAACTACATAGGCTTGGAGAGACATGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAGTATAGGAATAAGACAACTACATAGGCTTGGAGAGACATGTGA  400

seq1  GGTGAAATGGAAAACTATAACCAGGAAAATCTAAGATCATGAACAGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAATGGAAAACTATAACCAGGAAAATCTAAGATCATGAACAGGGAA  450

seq1  ATAACACTAAATTAGAGAAGGTTAGTGAGTTGCCCCCAATTTTATGTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACTAAATTAGAGAAGGTTAGTGAGTTGCCCCCAATTTTATGTATG  500

seq1  TTCGTTGTTTGGAAGTTACCAGAGCAATTGCAAGAGAGTTTAGTAAGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTGTTTGGAAGTTACCAGAGCAATTGCAAGAGAGTTTAGTAAGAAC  550

seq1  TAATCAGTGTTTAAGATAGGCAGAGATATACCTGCTCGTCGGTCTAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGTGTTTAAGATAGGCAGAGATATACCTGCTCGTCGGTCTAGAAA  600

seq1  GACAATTGGATTGGGCATTTTGTAATCTGTTCAGGTTACTGGATAATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTGGATTGGGCATTTTGTAATCTGTTCAGGTTACTGGATAATATT  650

seq1  CTAATAATATGGGAAGAAAAGAAGAGAATTC  681
      |||||||||||||||||||||||||||||||
seq2  CTAATAATATGGGAAGAAAAGAAGAGAATTC  681


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