BAC Information

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BAC

Clone NameB6Ng01-289M10
Chromosome4 (Build37)
Map Location 77,855,047 - 77,856,184
singlet/doubletsinglet
Overlap geneLOC100039974
Upstream genenone
Downstream geneLOC100039996, LOC100040026
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289M10.bB6Ng01-289M10.g
ACCGA087081GA087082
length1,172419
definitionB6Ng01-289M10.b B6Ng01-289M10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcataattaattgagacttttgtagtcaaaaatcttgtcacctc
tcaactcaaatagttaagtaaaaatttcgttggacatcgatttcaaaaag
tatgaaaaaagccagaatggttgaaaatggaaaagcatttagaactgtgc
catcttgtttgggtggttctgattgtcttgggacataagttttagagtga
ttggacaggacagtgtacccgatgatgattctggttacacaaagttgtaa
tggaagggaatcacttcagaaagatgtgtcattgtctcctgaacatcact
ttatttctcaccccttgctctccattgccattcctgtgattgaatttaaa
taatttaaactgagatcattggttgatcaaatctggattatatatatata
tatgttctctataatttgtgacctcaaatctctaagatgatgcatgacat
ttgaaaaaaaatacataaagggataattgtccataagctgtagtacttaa
gaatgaaccaaacattcaattacatatattttagtacgtatctattccca
cagaatgcacaggagacctgttcgtttctgaaagcagagacttatcagtt
acattgacaatgaactgacacacattctggctctgttatcattgtgtcag
tgttaggaagggcatcctgaattaaagctgtttctagtcatgcctacaga
gatacctggtaatttgtttctgtaaccatagggaggggaaccttagccag
aatgataaaattgttagctttttgacaccagcttttttatgtcatacagg
agttgcaactttaagttgaaaagaataaagttgctagtgtcagcagtaat
gtgttttattatgcaattgttcttgttattcaggatcggataatggtctg
atgaaatacataagcagtctgcagggaatgaatgaataatttctcttaac
gtgtggcttaccaaaggagttttttacttaataagttgcctgtggaacct
gcattttgcttacatgtggcagttgagtggaaagcaaaacatacccttcc
cttccctttaatatcaacagggaaatttaaggaagtctgttttctggtaa
ctattagcaacctaaatttttgaattttggtagatacacccatggtctat
aataaatttatagaaagttctc

tcacagaaagaggtctatcatgactgccctacaaaggacgcaacaagcag
ctgaaagagtcagatgcagttatttcatccaatcaaaggacagaagctgc
tgacccatgtggttgatttagggaaaagttggaagaagctgaggaggagg
gcaaccctgtaggaggattagcagtattaattaatctggttcacgagatc
tctcagacactggaccaccaaacattaagcatacaccagctgatatgagg
ctctcaacacatataaagcagagaactgccagctcttggttcagtcagag
aagatgcacctacctctgaagagtctagaggcctcagggagtgaggaggt
ctagtagcatgaagggggcatccttgtggagatagggtgtgtgttgggag
ggcaggatgtatgggatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_77855047_77856184
seq2: B6Ng01-289M10.b_47_1218 (reverse)

seq1  GAGAACTT--CATAAATT--ATAT-GACCATGTG---GTCTA-CAAAAT-  40
      ||||||||   |||||||   ||| ||||||| |    |||| |||||| 
seq2  GAGAACTTTCTATAAATTTATTATAGACCATGGGTGTATCTACCAAAATT  50

seq1  --CAAATTTATGTTGCT-ATAGTTA-CAG-AAACAGACT--CCTAAATTT  83
         ||||||| |||||| ||||||| ||| |||||||||  | |||||||
seq2  CAAAAATTTAGGTTGCTAATAGTTACCAGAAAACAGACTTCCTTAAATTT  100

seq1  -CCTGTTGATATT-AAGGGAAGGGAA-GGTATG-TTTGCTTT-CAC-CAA  127
       |||||||||||| |||||||||||| |||||| |||||||| ||| |||
seq2  CCCTGTTGATATTAAAGGGAAGGGAAGGGTATGTTTTGCTTTCCACTCAA  150

seq1  CTGCAAC-TGTAAGC-AAATGCAGG-TCCACA-GCACTTTATT-AGT-AA  171
      |||| || ||||||| ||||||||| |||||| |||  ||||| ||| ||
seq2  CTGCCACATGTAAGCAAAATGCAGGTTCCACAGGCAACTTATTAAGTAAA  200

seq1  AAACTCCTTTGGTAAG-CACACGTT-AGAGGAATTAATCATTCATTCCCT  219
      |||||||||||||||| |||||||| |||| ||||| |||||||||||||
seq2  AAACTCCTTTGGTAAGCCACACGTTAAGAGAAATTATTCATTCATTCCCT  250

seq1  GCAGACTGCTTATGTATTTCATCAGACCATTATCCGAT-CTGAATAACAA  268
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCAGACTGCTTATGTATTTCATCAGACCATTATCCGATCCTGAATAACAA  300

seq1  GAACAATTGCATAATAAAACACATTACTGCTGACACTAGCAACTTTATTC  318
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATTGCATAATAAAACACATTACTGCTGACACTAGCAACTTTATTC  350

seq1  -TTTCAACTTTAAAGTTGCAACTCCTGTATGACAT-AAAAAGCTGGTGTC  366
       ||||||| |||||||||||||||||||||||||| ||||||||||||||
seq2  TTTTCAAC-TTAAAGTTGCAACTCCTGTATGACATAAAAAAGCTGGTGTC  399

seq1  AAAAAGCTAACAATTTTATCATTCTGGCTAAGGTTCCCCTCCCTATGGTT  416
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCTAACAATTTTATCATTCTGGCTAAGGTTCCCCTCCCTATGGTT  449

seq1  ACAGAAAC-AATTACCAGGTATCTCTGTAGGCATGACTAGAAACAGCTTT  465
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACAAATTACCAGGTATCTCTGTAGGCATGACTAGAAACAGCTTT  499

seq1  AATTCAGGATGCCCTTCCTAACACTGACACAATGATAACAGAGCCAGAAT  515
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGGATGCCCTTCCTAACACTGACACAATGATAACAGAGCCAGAAT  549

seq1  GTGTGTCAGTTCATTGTCAATGTAACTGATAAGTCTCTGCTTTCAGAAAC  565
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCAGTTCATTGTCAATGTAACTGATAAGTCTCTGCTTTCAGAAAC  599

seq1  GAACAGGTCTCCTGTGCATTCTGTGGGAATAGATACGTACTAAAATATAT  615
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGTCTCCTGTGCATTCTGTGGGAATAGATACGTACTAAAATATAT  649

seq1  GTAATTGAATGTTTGGTTCATTCTTAAGTACTACAGCTTATGGACAATTA  665
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGAATGTTTGGTTCATTCTTAAGTACTACAGCTTATGGACAATTA  699

seq1  TCCCTTTATGTATTTTTTTTCAAATGTCATGCATCATCTTAGAGATTTGA  715
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTATGTATTTTTTTTCAAATGTCATGCATCATCTTAGAGATTTGA  749

seq1  GGTCACAAATTATAGAGAACATATATATATATATAATCCAGATTTGATCA  765
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACAAATTATAGAGAACATATATATATATATAATCCAGATTTGATCA  799

seq1  ACCAATGATCTCAGTTTAAATTATTTAAATTCAATCACAGGAATGGCAAT  815
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGATCTCAGTTTAAATTATTTAAATTCAATCACAGGAATGGCAAT  849

seq1  GGAGAGCAAGGGGTGAGAAATAAAGTGATGTTCAGGAGACAATGACACAT  865
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCAAGGGGTGAGAAATAAAGTGATGTTCAGGAGACAATGACACAT  899

seq1  CTTTCTGAAGTGATTCCCTTCCATTACAACTTTGTGTAACCAGAATCATC  915
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGAAGTGATTCCCTTCCATTACAACTTTGTGTAACCAGAATCATC  949

seq1  ATCGGGTACACTGTCCTGTCCAATCACTCTAAAACTTATGTCCCAAGACA  965
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGGTACACTGTCCTGTCCAATCACTCTAAAACTTATGTCCCAAGACA  999

seq1  ATCAGAACCACCCAAACAAGATGGCACAGTTCTAAATGCTTTTCCATTTT  1015
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAACCACCCAAACAAGATGGCACAGTTCTAAATGCTTTTCCATTTT  1049

seq1  CAACCATTCTGGCTTTTTTCATACTTTTTGAAATCGATGTCCAACGAAAT  1065
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATTCTGGCTTTTTTCATACTTTTTGAAATCGATGTCCAACGAAAT  1099

seq1  TTTTACTTAACTATTTGAGTTGAGAGGTGACAAGATTTTTGACTACAAAA  1115
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTAACTATTTGAGTTGAGAGGTGACAAGATTTTTGACTACAAAA  1149

seq1  GTCTCAATTAATTATGAGAATTC  1138
      |||||||||||||||||||||||
seq2  GTCTCAATTAATTATGAGAATTC  1172


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