BAC Information

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BAC

Clone NameB6Ng01-289P09
Chromosome4 (Build37)
Map Location 17,114,344 - 17,115,218
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667150, LOC383994, LOC100040154, LOC667212
Downstream geneLOC100040173, Mmp16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289P09.bB6Ng01-289P09.g
ACCGA087221GA087222
length8751,170
definitionB6Ng01-289P09.b B6Ng01-289P09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggatattagtttgtgtattcaagaagtaatttcagtgaaaagc
cttttaaacaaaagaaaaataagccatagtttgtgaagtaagattgcaaa
caattccctagtctcaagttttagaaaagtttacaaaaaaaatcatgacg
taagtcacctagaaagagtatgcaatttcccaaactagatacatcaaaat
ataatacccattcatatatatctctgaccaaaaggcatcaaaatgtagta
aaacatagacttgtcagctctcttttatttctatagttatgattttctgg
gattaagctcatttgatacattgaagatactttaatattagaagaaatgg
gcttgaccttatcactgacattgagactttttcctttagaatataaattc
taacatttgacaccactgtgtgcatgaaaaatactctgatagttgtaata
taaaggcagtagttaaaaagctaactacatacatgggaaacttcaggttt
tctttactgttttattaatgactccaagtgcagtaattttctgagaatat
caagtacagtttgttaattcaaaaatactccttcctattttaatgatgag
ctactaaggaaatctgaacaaaagctaagaaaacaaaacaaaacaaaata
ccagtagttctaatttaagtactgccagctattttgaatttggtatcata
agaatcctaagataatactatcaagttctgtaaaatcaagagcaaagaca
gtgtgacctggagagtttgaaggagaagttggaatctccctggccaacaa
cttacaggaatatattccacccatgaaactagaattttccttctcttctc
ttctcttctcttctcttatcttatc

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagttacaatttcctaaagacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaatcacccttggaaggagttacagagacaaagtttggagctgagatta
aaagggtggaccatgtagagactgccttatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagactatgccggggccctagcaa
acacagaagtggatgccccacagtcagcttaatggatggatcacaggctt
ccaatggagagctagagaaagtacccaaggagctaaggatctgcaaccct
atagggtgatcaacattatgaactaacagtaccccggagctcttgacctc
ttagctgcatattgttatcaaaggatgcctagtcgtcattcactgaaaga
gaagtccattgtacctcgaacttatatgccttgaacaggaatgtctagga
ctcaaaagaggaaatgtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_17114344_17115218
seq2: B6Ng01-289P09.b_47_921

seq1  GAATTCAGGATATTAGTTTGTGTATTCAAGAAGTAATTTCAGTGAAAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGATATTAGTTTGTGTATTCAAGAAGTAATTTCAGTGAAAAGC  50

seq1  CTTTTAAACAAAAGAAAAATAAGCCATAGTTTGTGAAGTAAGATTGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAACAAAAGAAAAATAAGCCATAGTTTGTGAAGTAAGATTGCAAA  100

seq1  CAATTCCCTAGTCTCAAGTTTTAGAAAAGTTTACAAAAAAAATCATGACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCCTAGTCTCAAGTTTTAGAAAAGTTTACAAAAAAAATCATGACG  150

seq1  TAAGTCACCTAGAAAGAGTATGCAATTTCCCAAACTAGATACATCAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCACCTAGAAAGAGTATGCAATTTCCCAAACTAGATACATCAAAAT  200

seq1  ATAATACCCATTCATATATATCTCTGACCAAAAGGCATCAAAATGTAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACCCATTCATATATATCTCTGACCAAAAGGCATCAAAATGTAGTA  250

seq1  AAACATAGACTTGTCAGCTCTCTTTTATTTCTATAGTTATGATTTTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGACTTGTCAGCTCTCTTTTATTTCTATAGTTATGATTTTCTGG  300

seq1  GATTAAGCTCATTTGATACATTGAAGATACTTTAATATTAGAAGAAATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGCTCATTTGATACATTGAAGATACTTTAATATTAGAAGAAATGG  350

seq1  GCTTGACCTTATCACTGACATTGAGACTTTTTCCTTTAGAATATAAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGACCTTATCACTGACATTGAGACTTTTTCCTTTAGAATATAAATTC  400

seq1  TAACATTTGACACCACTGTGTGCATGAAAAATACTCTGATAGTTGTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTGACACCACTGTGTGCATGAAAAATACTCTGATAGTTGTAATA  450

seq1  TAAAGGCAGTAGTTAAAAAGCTAACTACATACATGGGAAACTTCAGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCAGTAGTTAAAAAGCTAACTACATACATGGGAAACTTCAGGTTT  500

seq1  TCTTTACTGTTTTATTAATGACTCCAAGTGCAGTAATTTTCTGAGAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACTGTTTTATTAATGACTCCAAGTGCAGTAATTTTCTGAGAATAT  550

seq1  CAAGTACAGTTTGTTAATTCAAAAATACTCCTTCCTATTTTAATGATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACAGTTTGTTAATTCAAAAATACTCCTTCCTATTTTAATGATGAG  600

seq1  CTACTAAGGAAATCTGAACAAAAGCTAAGAAAACAAAACAAAACAAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAAGGAAATCTGAACAAAAGCTAAGAAAACAAAACAAAACAAAATA  650

seq1  CCAGTAGTTCTAATTTAAGTACTGCCAGCTATTTTGAATTTGGTATCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAGTTCTAATTTAAGTACTGCCAGCTATTTTGAATTTGGTATCATA  700

seq1  AGAATCCTAAGATAATACTATCAAGTTCTGTAAAATCAAGAGCAAAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCTAAGATAATACTATCAAGTTCTGTAAAATCAAGAGCAAAGACA  750

seq1  GTGTGACCTGGAGAGTTTGAAGGAGAAGTTGGAATCTCCCTGGCCAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACCTGGAGAGTTTGAAGGAGAAGTTGGAATCTCCCTGGCCAACAA  800

seq1  CTTACAGGAATATATTCCACCCATGAAACTAGAATTTTCCTTCTCTTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGGAATATATTCCACCCATGAAACTAGAATTTTCCTTCTCTTCTC  850

seq1  TTCTCTTCTCTTCTCTTCTCTTCTC  875
      ||||||||||||||||| |||| ||
seq2  TTCTCTTCTCTTCTCTTATCTTATC  875


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