BAC Information

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BAC

Clone NameB6Ng01-290C06
Chromosome4 (Build37)
Map Location 36,117,899 - 36,118,311
singlet/doubletsinglet
Overlap genenone
Upstream gene3110043O21Rik, LOC620559, LOC621227, Lingo2
Downstream geneLOC100042132, LOC545600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290C06.bB6Ng01-290C06.g
ACCGA087356GA087357
length1,180405
definitionB6Ng01-290C06.b B6Ng01-290C06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactataaataactgcttctatttct
ttaggtgatatgggactgtttagatgatcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgcagtctactcctcttgggtgaatttgcttccttttttttctagg
gcttttagatgtgttgtcaagctgctagtatgtgctgtctctcgtttctt
cttggaggcactcagagctatgagtttccctcttagaaaatgctttcaat
gtgtcccataggttggtacgttgtggcttcattttcaattaaactctaaa
aagtcttaaatttctttcttatccttccttgacccaggtaatcattgaga
agaaggtgttatcacgtttccacgtgaatgtgcttccatattttatgatg
gttatagagagaatcagctccttatatgcg

ttctaagtaatgtcactatggcctcatcatcagaatgttggaaaggacag
actcttggaaacagaagccatctcctagacaatacttgcatgctagcctt
acaatttgaaaactttgagactgaagagaagcctcggggtcagagcactt
gctgcccttgcagaagccccaagttcagatttgagcactcacagctacct
ttaactccagctccaggaaatctaattttctgttgtagtctgtggagaga
gagaaagagagagagagagggagagagagagagagagagggagagagaga
gagagagagagagagagagagagagagagatttagagagtgttagagagt
gaatatttaagttgtcgatgcaaagaaatagagcgtatctctcccaactt
ggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_36117899_36118311
seq2: B6Ng01-290C06.g_67_477 (reverse)

seq1  CCTCCAAGTTGGGAGAGGTCTGCTCTATTTCTTTGCATCGACAACTTAGA  50
      ||||||||||||||||| |  ||||||||||||||||||||||||||| |
seq2  CCTCCAAGTTGGGAGAGATACGCTCTATTTCTTTGCATCGACAACTTAAA  50

seq1  TATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  100
      |||  || ||||||  | ||||||   |||||||||||||||||||||||
seq2  TAT--TCACTCTCTAACACTCTCTAAATCTCTCTCTCTCTCTCTCTCTCT  98

seq1  CTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCT  148

seq1  CTTTCTCTCTCTCCACAGACTACAACAGAAAATTAGATTTCCTGGAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTCTCTCCACAGACTACAACAGAAAATTAGATTTCCTGGAGCTG  198

seq1  GAGTTAAAGGTAGCTGTGAGTGCTCAAATCTGAACTTGGGGCTTCTGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAAAGGTAGCTGTGAGTGCTCAAATCTGAACTTGGGGCTTCTGCAA  248

seq1  GGGCAGCAAGTGCTCTGACCCCGAGGCTTCTCTTCAGTCTCAAAGTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCAAGTGCTCTGACCCCGAGGCTTCTCTTCAGTCTCAAAGTTTTC  298

seq1  AAATTGTAAGGCTAGCATGCAAGTATTGTCTAGGAGATGGCTTCTGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTAAGGCTAGCATGCAAGTATTGTCTAGGAGATGGCTTCTGTTTC  348

seq1  CAAGAGTCTGTCCTTTCCAACATTCTGATGATGAGGCCATAGTGACATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTCTGTCCTTTCCAACATTCTGATGATGAGGCCATAGTGACATTA  398

seq1  CTTAGAAGAATTC  413
      |||||||||||||
seq2  CTTAGAAGAATTC  411


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