BAC Information

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BAC

Clone NameB6Ng01-290G14
Chromosome4 (Build37)
Map Location 91,385,046 - 91,490,761
singlet/doubletdoublet
Overlap geneLOC620016
Upstream genePpia-ps4_804.1, LOC664840, LOC664848, LOC100042274, Elavl2, LOC664864
Downstream geneLOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290G14.bB6Ng01-290G14.g
ACCGA087560GA087561
length9811,089
definitionB6Ng01-290G14.b B6Ng01-290G14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,489,789 - 91,490,761)(91,385,046 - 91,386,135)
sequence
gaattccaatactccaaaatgttgaagactttgagatactaaacttgtgt
ttaattatagaaaatattaatatgtaaagttttgaaccaaaatgtctaaa
aaaaagaaattttgaatgttttgttatttaagattgaattatcctgtttt
atagaagtagagttattatagcagtccacgtggaatttttcattttattg
ggtattttatttgaaatgttcaaatgttatctccttttctggtttcccct
ctgcaaaccctctaacccatcctccctccccccacatctatgagggtgct
cacccacccacctccttgccctggcatttctctatactggggcattgtgc
cttcccaggaccaagggcttctcctcccattgatgtctgacaaggccatc
ctctgctgctcttttgttggtggtttagttcctgggagctcttgggattt
ttaacaccatgaactagctgaaagttatacatggtatgaggggtagcaca
cacaatacttgaatttgttgaattctttaatgattctctttaatgatctc
tttaaataattactagttaaaatattattacttcatttcccctctctttc
ctctctcccatatctctctttctcttatattcttcctctctcaaactcat
ggcacctttttttcctttaactgtttttatacacacacacacacacacac
acacaccttagtatacctacacacatactgctgcacaacacacacataca
tacacacacacactcacaatacatatacatatacatatacatatacatat
acatatacatatacatatatatatatatacctaattatataaacacccat
tggttgatgctatctttagatgattttagtaggtacacagtttaattcag
atgggaaaaaaaatctaaaatgtctactctttctgcacggtatctagcaa
aagtgggaggtaactggtaaaggggggtgta
gaattctgtcaggttcttcttcttctgaaataggagtactccagtctgtt
ctggacgaagccacaactagataaaggcttctgtgatctgtgtgtccatt
tgtcactaggaatgctctgaaaagctttctatgtgtcagtgaggcctgat
tagaaacagatattttgaagagaagacggagaaactcacctctcataggc
atcacatcttctctacatgaaaaggaagccatttatgatgcaaactggtg
aaataaatgtcttgttacttctccttctctcaggccaccagtgatcacaa
attggcctgccccctctcgcatttttccctatcatatacataacatcgtc
tcataaagatgggtcaatccatcacatatggctcattgaactactaaagc
agaaacaaaagttagaatccatttcgaaaaatacaatatttagtttttcc
cattcaactgtgtaggaaaggtttagggcataattgtattttctaaagag
acgactattgatagtaataaaaaggagaaatgtaagtttctctttctata
tatatgtatatcaaacttgaacaagtgatgtaaaaagttagacaaacccc
tgcatcttccagtgttaaaactgggttgtattaacctcagatgactgtgt
ccttgctagctttggcttacttcatactctaccttttgaatttgtaaaca
cattcaaaaattgagtcagctgtttttttttttttttttaattctggtgt
cacttggttagatccaactactgtaattattttatgtacttatctttttt
cttctactgcattttaaatttttgtcaactgaagaaactgtctgtgatgg
ttttattctttaactcaatatctgtaactacagtcaactctagggctaga
aagatgctaggaatagctagttagtcagccttgctcattttttttttttt
ttttcgagacagtgtttctctgtatagcctgggctgatctgcaaactcac
ttctatagacagggtgccttgaactcaggccttgctcattcttactttga
ctgaatataagtcctcgattgactgacttgcccaggtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_91489789_91490761
seq2: B6Ng01-290G14.b_41_1021 (reverse)

seq1  TACACCCCC--TTTCCAGTTACCTCCCAC-TTTGCTAGATACC-TGCAGA  46
      |||||||||  || ||||||||||||||| ||||||||||||| ||||||
seq2  TACACCCCCCTTTACCAGTTACCTCCCACTTTTGCTAGATACCGTGCAGA  50

seq1  AAGAGTAGACATTTTAGATTTTTTT--CCATCTG-ATTAAACTGTGTACC  93
      |||||||||||||||||||||||||  ||||||| |||||||||||||||
seq2  AAGAGTAGACATTTTAGATTTTTTTTCCCATCTGAATTAAACTGTGTACC  100

seq1  TACTAAAATCATCTAAAGATAGCATCAACCAATTGGTGTTTATATAATTA  143
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TACTAAAATCATCTAAAGATAGCATCAACCAATGGGTGTTTATATAATTA  150

seq1  GGTATATATATATATATGTATATGTATATGTATATGTATATGTATATGTA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATATATATATATGTATATGTATATGTATATGTATATGTATATGTA  200

seq1  TATGTATATGTATTGTGAGTGTGTGTGTGTATGTATGTGTGTGTTGTGCA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATGTATTGTGAGTGTGTGTGTGTATGTATGTGTGTGTTGTGCA  250

seq1  GCAGTATGTGTGTAGGTATACTAAGGTGTGTGTGTGTGTGTGTGTGTGTG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATGTGTGTAGGTATACTAAGGTGTGTGTGTGTGTGTGTGTGTGTG  300

seq1  TATAAAAACAGTTAAAGG-AAAAAAGGTGCCATGAGTTTGAGAGAGGAAG  342
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TATAAAAACAGTTAAAGGAAAAAAAGGTGCCATGAGTTTGAGAGAGGAAG  350

seq1  AATATAAGAGAAAGAGAGATATGGGAGAGAGGAAAGAGAGGGGAAATGAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAGAGAAAGAGAGATATGGGAGAGAGGAAAGAGAGGGGAAATGAA  400

seq1  GTAATAATATTTTAACTAGTAATTATTTAAAGAGATCATTAAAGAGAATC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAATATTTTAACTAGTAATTATTTAAAGAGATCATTAAAGAGAATC  450

seq1  ATTAAAGAATTCAACAAATTCAAGTATTGTGTGTGCTACCCCTCATACCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGAATTCAACAAATTCAAGTATTGTGTGTGCTACCCCTCATACCA  500

seq1  TGTATAACTTTCAGCTAGTTCATGGTGTTAAAAATCCCAAGAGCTCCCAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAACTTTCAGCTAGTTCATGGTGTTAAAAATCCCAAGAGCTCCCAG  550

seq1  GAACTAAACCACCAACAAAAGAGCAGCAGAGGATGGCCTTGTCAGACATC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAACCACCAACAAAAGAGCAGCAGAGGATGGCCTTGTCAGACATC  600

seq1  AATGGGAGGAGAAGCCCTTGGTCCTGGGAAGGCACAATGCCCCAGTATAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAGGAGAAGCCCTTGGTCCTGGGAAGGCACAATGCCCCAGTATAG  650

seq1  AGAAATGCCAGGGCAAGGAGGTGGGTGGGTGAGCACCCTCATAGATGTGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCCAGGGCAAGGAGGTGGGTGGGTGAGCACCCTCATAGATGTGG  700

seq1  GGGGAGGGAGGATGGGTTAGAGGGTTTGCAGAGGGGAAACCAGAAAAGGA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGAGGATGGGTTAGAGGGTTTGCAGAGGGGAAACCAGAAAAGGA  750

seq1  GATAACATTTGAACATTTCAAATAAAATACCCAATAAAATGAAAAATTCC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACATTTGAACATTTCAAATAAAATACCCAATAAAATGAAAAATTCC  800

seq1  ACGTGGACTGCTATAATAACTCTACTTCTATAAAACAGGATAATTCAATC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGACTGCTATAATAACTCTACTTCTATAAAACAGGATAATTCAATC  850

seq1  TTAAATAACAAAACATTCAAAATTTCTTTTTTTTAGACATTTTGGTTCAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAACAAAACATTCAAAATTTCTTTTTTTTAGACATTTTGGTTCAA  900

seq1  AACTTTACATATTAATATTTTCTATAATTAAACACAAGTTTAGTATCTCA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTACATATTAATATTTTCTATAATTAAACACAAGTTTAGTATCTCA  950

seq1  AAGTCTTCAACATTTTGGAGTATTGGAATTC  973
      |||||||||||||||||||||||||||||||
seq2  AAGTCTTCAACATTTTGGAGTATTGGAATTC  981

seq1: chr4_91385046_91386135
seq2: B6Ng01-290G14.g_62_1150

seq1  GAATTCTGTCAGGTTCTTCTTCTTCTGAAATAGGAGTACTCCAGTCTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCAGGTTCTTCTTCTTCTGAAATAGGAGTACTCCAGTCTGTT  50

seq1  CTGGACGAAGCCACAACTAGATAAAGGCTTCTGTGATCTGTGTGTCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACGAAGCCACAACTAGATAAAGGCTTCTGTGATCTGTGTGTCCATT  100

seq1  TGTCACTAGGAATGCTCTGAAAAGCTTTCTATGTGTCAGTGAGGCCTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTAGGAATGCTCTGAAAAGCTTTCTATGTGTCAGTGAGGCCTGAT  150

seq1  TAGAAACAGATATTTTGAAGAGAAGACGGAGAAACTCACCTCTCATAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACAGATATTTTGAAGAGAAGACGGAGAAACTCACCTCTCATAGGC  200

seq1  ATCACATCTTCTCTACATGAAAAGGAAGCCATTTATGATGCAAACTGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATCTTCTCTACATGAAAAGGAAGCCATTTATGATGCAAACTGGTG  250

seq1  AAATAAATGTCTTGTTACTTCTCCTTCTCTCAGGCCACCAGTGATCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGTCTTGTTACTTCTCCTTCTCTCAGGCCACCAGTGATCACAA  300

seq1  ATTGGCCTGCCCCCTCTCGCATTTTTCCCTATCATATACATAACATCGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCCTGCCCCCTCTCGCATTTTTCCCTATCATATACATAACATCGTC  350

seq1  TCATAAAGATGGGTCAATCCATCACATATGGCTCATTGAACTACTAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAGATGGGTCAATCCATCACATATGGCTCATTGAACTACTAAAGC  400

seq1  AGAAACAAAAGTTAGAATCCATTTCGAAAAATACAATATTTAGTTTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAAAGTTAGAATCCATTTCGAAAAATACAATATTTAGTTTTTCC  450

seq1  CATTCAACTGTGTAGGAAAGGTTTAGGGCATAATTGTATTTTCTAAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACTGTGTAGGAAAGGTTTAGGGCATAATTGTATTTTCTAAAGAG  500

seq1  ACGACTATTGATAGTAATAAAAAGGAGAAATGTAAGTTTCTCTTTCTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACTATTGATAGTAATAAAAAGGAGAAATGTAAGTTTCTCTTTCTATA  550

seq1  TATATGTATATCAAACTTGAACAAGTGATGTAAAAAGTTAGACAAACCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTATATCAAACTTGAACAAGTGATGTAAAAAGTTAGACAAACCCC  600

seq1  TGCATCTTCCAGTGTTAAAACTGGGTTGTATTAACCTCAGATGACTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTTCCAGTGTTAAAACTGGGTTGTATTAACCTCAGATGACTGTGT  650

seq1  CCTTGCTAGCTTTGGCTTACTTCATACTCTACCTTTTGAATTTGTAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTAGCTTTGGCTTACTTCATACTCTACCTTTTGAATTTGTAAACA  700

seq1  CATTCAAAAATTGAGTCAGCTG--TTTTTTTTTTTTTTTAATTCTGGTGT  748
      ||||||||||||||||||||||  ||||||||||||||||||||||||||
seq2  CATTCAAAAATTGAGTCAGCTGTTTTTTTTTTTTTTTTTAATTCTGGTGT  750

seq1  CACTTGGTTAGATCCAACTACTGTAATTATTTTATGTACTTATC-TTTTT  797
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CACTTGGTTAGATCCAACTACTGTAATTATTTTATGTACTTATCTTTTTT  800

seq1  CTTCTACTGCATTTTAAATTTTTGTCAACTGAAGAAACTGTCTGTGATGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACTGCATTTTAAATTTTTGTCAACTGAAGAAACTGTCTGTGATGG  850

seq1  TTTTATTCTTTAACTCAATATCTGTAACTACAGTCAACTCTAGGGCTAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCTTTAACTCAATATCTGTAACTACAGTCAACTCTAGGGCTAGA  900

seq1  AAGATGCTAGGAATAGCTAGTTAGTCAGGCTTGCTCA--TTTTTTTTTTT  945
      |||||||||||||||||||||||||||| ||||||||  |||||||||||
seq2  AAGATGCTAGGAATAGCTAGTTAGTCAGCCTTGCTCATTTTTTTTTTTTT  950

seq1  TTTTCGAGACAGTGTTTCTCTGTATAGCCCTGGCTGTCCTG-GAACTCAC  994
      |||||||||||||||||||||||||||||  |||||  |||  |||||||
seq2  TTTTCGAGACAGTGTTTCTCTGTATAGCCTGGGCTGATCTGCAAACTCAC  1000

seq1  -TCTATAGACCAGGGTGGCCTTGAACTCAGGGCTTGCTCATTCTTTTATT  1043
       |||||||| |||||| |||||||||||||| |||||||||||  ||| |
seq2  TTCTATAGA-CAGGGT-GCCTTGAACTCAGGCCTTGCTCATTC--TTACT  1046

seq1  TGAAATTGATATAAAGGTCTCAGTTTGAGTGAACATTGCCCAGGTAT  1090
      |  | |  ||||||  |||   | |||| |||   ||||||||||||
seq2  TTGACTGAATATAA--GTCCTCGATTGACTGA--CTTGCCCAGGTAT  1089