BAC Information

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BAC

Clone NameB6Ng01-290O07
Chromosome4 (Build37)
Map Location 11,918,774 - 12,076,859
singlet/doubletdoublet
Overlap geneTmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b
Upstream genePlekhf2, 2310030N02Rik, LOC546828, LOC666897, Trp53inp1, Ccne2, Ints8, Dpy19l4, Rbm35a, LOC634834, 1110037F02Rik, LOC100039847, E130016E03Rik, LOC100039862, Gem, Cdh17, Ppm2c
Downstream gene6720467C03Rik, LOC545592, OTTMUSG00000004461
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290O07.bB6Ng01-290O07.g
ACCGA087921GA087922
length1,064926
definitionB6Ng01-290O07.b B6Ng01-290O07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,075,800 - 12,076,859)(11,918,774 - 11,919,692)
sequence
gaattcactttgtagaccaggctggcgctcgaactcagaaatctgcctcc
ctctgcctcccaagtgctgggattaaaggcgtagttaagtaccatacctt
ttattctttaaatgcaactttaaaagcaaatagatactcctaaaaatatt
tttatcgtgatttaagaaagtgacacaacaataaatatttatagacaggg
tataatcagggatgtgctggtattgaaattggttccctaacatagtctga
cttcaggcaccttgtttgactttctaaacttcatttctcatttataaaat
acagttataataaacattgagatcatacacataaagtgcttattggctaa
tataagtatccactgtcaactatttctattattgtggacaaggaaaatct
aattgagtacaaaaacatgagtatcaaaaaagccaaaattcattcagaaa
tctgtatttagtgagtctgagttaactactgaatacaatgaaccaccact
aagttcttcctagaaaaacccatattcttccctagcctgagagttctcgt
taccctaaacagattagtttactgtcttctgaacgttttgtgttagtctt
tgcaatctacttagggtaacacctagagcccagtgctaagataaaatggt
gttgaagaaatcatagacctgtacatcattagtacagattagatgtcctg
ctcaggacatactataatatagctgctgagaggctcatactacccagagc
aattcttctgtctttcctcttgttacacaaatacaagttagtaagtattt
caagtgaaattttatttttataaaactttacaaagttgtgaatacaaatt
ttgagattttcctgaggcatcacatgagaaaatttcatttcacagtaagt
tcatttttgggactagttaaagttcataggagacattgggcacaatgtct
cgcagacacttttcaaggcaagtagcgataaaagtgccaaacctgactat
caggtgtactcaatgggtttatgtcgtcaccctggacacaagctgggagt
tattcacagagctt
gaattccagcactcatggcccgaattcctcttatttgctagatccctggg
gtccaaagctgaaactgtgaagccttctatctagtgatagaaataggtgc
catgaaaagattcattcctgccacaatggagaacactctttcatacagaa
tggagcataactggggctgtataactttggggatggacatgttgatgaag
tgacacttaagatggatttcaaatgcttgctagcacttatccagccagag
agagaatggggaagggcacagcagagaatggagatggttggtgcaagagg
tacaaatgtctgagggatggggtgtctttagcatggtgatagtggtaaag
aggggactaagaaaaagaagaaagtcaaaccagatgctgaatgcaaattt
caaaaggtctgtagttctaagatacggattgtggatcatggagaagcagg
gactagaagggtctcaagggagttcctggtctgcctagatacttgttgga
aaggcaacttagctagacaggaggcggcattagtttactccagtgcatga
gggttatcctgaagtacaaggagacagaatggtaatgtgttcatgtcttc
tgatgttggagactgctgttccagacccaggagactcagtggtgcagcca
aaggccagagtaccaagagaatggatagtataagctcagaactaattcag
agtcaacaggcagaagagttgcacccaatttggagacaatcaagaaaaag
ggaaagagttcttcttattcattccttttgttctattcaggtctccaact
agctgatggagtagagtcatctgcactgaggtgggggacagcttgcttca
ctctctacggagtcacgtgtttacccccacttgggaaacattcttgcagc
aggttgtccaattatctgggacagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_12075800_12076859
seq2: B6Ng01-290O07.b_45_1108 (reverse)

seq1  AAGCTCTGTG-ATAACT-CCAGCTTGTGT-CAAGGTGACAACATAAAACC  47
      |||||||||| |||||| ||||||||||| || |||||| ||||||| ||
seq2  AAGCTCTGTGAATAACTCCCAGCTTGTGTCCAGGGTGACGACATAAACCC  50

seq1  ATTGAGTACAACTGATTAATCAGGTTTGGCACTTTTATTGCTACTTGCCT  97
      |||||||||| |||| || ||||||||||||||||||| |||||||||||
seq2  ATTGAGTACACCTGA-TAGTCAGGTTTGGCACTTTTATCGCTACTTGCCT  99

seq1  GAAAAAGTGTTTGTGGAGACATTGTG-CCAATGTCTCCTATGAACTTTAA  146
        |||||||| ||  ||||||||||| |||||||||||||||||||||||
seq2  TGAAAAGTGTCTG-CGAGACATTGTGCCCAATGTCTCCTATGAACTTTAA  148

seq1  CTAGT-CCAAAAATGAACTTACTGTGAAATGAAATTTTCTCATGTGATGC  195
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCCCAAAAATGAACTTACTGTGAAATGAAATTTTCTCATGTGATGC  198

seq1  CTCAGGAAAATCTCAAAATTTGTATTCACAACTTTGTAAAGTTTTATAAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAAAATCTCAAAATTTGTATTCACAACTTTGTAAAGTTTTATAAA  248

seq1  AATAAAATTTCACTTGAAATACTTACTAACTTGTATTTGTGTAACAAGAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTTCACTTGAAATACTTACTAACTTGTATTTGTGTAACAAGAG  298

seq1  GAAAGACAGAAGAATTGCTCTGGGTAGTATGAGCCTCTCAGCAGCTATAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACAGAAGAATTGCTCTGGGTAGTATGAGCCTCTCAGCAGCTATAT  348

seq1  TATAGTATGTCCTGAGCAGGACATCTAATCTGTACTAATGATGTACAGGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTATGTCCTGAGCAGGACATCTAATCTGTACTAATGATGTACAGGT  398

seq1  CTATGATTTCTTCAACACCATTTTATCTTAGCACTGGGCTCTAGGTGTTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATTTCTTCAACACCATTTTATCTTAGCACTGGGCTCTAGGTGTTA  448

seq1  CCCTAAGTAGATTGCAAAGACTAACACAAAACGTTCAGAAGACAGTAAAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGTAGATTGCAAAGACTAACACAAAACGTTCAGAAGACAGTAAAC  498

seq1  TAATCTGTTTAGGGTAACGAGAACTCTCAGGCTAGGGAAGAATATGGGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGTTTAGGGTAACGAGAACTCTCAGGCTAGGGAAGAATATGGGTT  548

seq1  TTTCTAGGAAGAACTTAGTGGTGGTTCATTGTATTCAGTAGTTAACTCAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGGAAGAACTTAGTGGTGGTTCATTGTATTCAGTAGTTAACTCAG  598

seq1  ACTCACTAAATACAGATTTCTGAATGAATTTTGGCTTTTTTGATACTCAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTAAATACAGATTTCTGAATGAATTTTGGCTTTTTTGATACTCAT  648

seq1  GTTTTTGTACTCAATTAGATTTTCCTTGTCCACAATAATAGAAATAGTTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTACTCAATTAGATTTTCCTTGTCCACAATAATAGAAATAGTTG  698

seq1  ACAGTGGATACTTATATTAGCCAATAAGCACTTTATGTGTATGATCTCAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGATACTTATATTAGCCAATAAGCACTTTATGTGTATGATCTCAA  748

seq1  TGTTTATTATAACTGTATTTTATAAATGAGAAATGAAGTTTAGAAAGTCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTATAACTGTATTTTATAAATGAGAAATGAAGTTTAGAAAGTCA  798

seq1  AACAAGGTGCCTGAAGTCAGACTATGTTAGGGAACCAATTTCAATACCAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGTGCCTGAAGTCAGACTATGTTAGGGAACCAATTTCAATACCAG  848

seq1  CACATCCCTGATTATACCCTGTCTATAAATATTTATTGTTGTGTCACTTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCCTGATTATACCCTGTCTATAAATATTTATTGTTGTGTCACTTT  898

seq1  CTTAAATCACGATAAAAATATTTTTAGGAGTATCTATTTGCTTTTAAAGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATCACGATAAAAATATTTTTAGGAGTATCTATTTGCTTTTAAAGT  948

seq1  TGCATTTAAAGAATAAAAGGTATGGTACTTAACTACGCCTTTAATCCCAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTAAAGAATAAAAGGTATGGTACTTAACTACGCCTTTAATCCCAG  998

seq1  CACTTGGGAGGCAGAGGGAGGCAGATTTCTGAGTTCGAG-GCCAGCCTGG  1044
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CACTTGGGAGGCAGAGGGAGGCAGATTTCTGAGTTCGAGCGCCAGCCTGG  1048

seq1  TCTACAAAGTGAATTC  1060
      ||||||||||||||||
seq2  TCTACAAAGTGAATTC  1064

seq1: chr4_11918774_11919692
seq2: B6Ng01-290O07.g_66_991

seq1  GAATTCCAGCACTCAGGGCCCGAATTCCTCTTATTTGCTAGATCCCTGGG  50
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCACTCATGGCCCGAATTCCTCTTATTTGCTAGATCCCTGGG  50

seq1  GTCCAAAGCTGAAACTGTGAAGCCTTCTATCTAGTGATAGAAATAGGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAAGCTGAAACTGTGAAGCCTTCTATCTAGTGATAGAAATAGGTGC  100

seq1  CATGAAAAGATTCATTCCTGCCACAATGGAGAACACTCTTTCATACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAAGATTCATTCCTGCCACAATGGAGAACACTCTTTCATACAGAA  150

seq1  TGGAGCATAACTGGGGCTGTATAACTTTGGGGATGGACATGTTGATGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCATAACTGGGGCTGTATAACTTTGGGGATGGACATGTTGATGAAG  200

seq1  TGACACTTAAGATGGATTTCAAATGCTTGCTAGCACTTATCCAGCCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTTAAGATGGATTTCAAATGCTTGCTAGCACTTATCCAGCCAGAG  250

seq1  AGAGAATGGGGAAGGGCACAGCAGAGAATGGAGATGGTTGGTGCAAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGGGGAAGGGCACAGCAGAGAATGGAGATGGTTGGTGCAAGAGG  300

seq1  TACAAATGTCTGAGGGATGGGGTGTCTTTAGCATGGTGATAGTGGTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATGTCTGAGGGATGGGGTGTCTTTAGCATGGTGATAGTGGTAAAG  350

seq1  AGGGGACTAAGAAAAAGAAGAAAGTCAAACCAGATGCTGAATGCAAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGACTAAGAAAAAGAAGAAAGTCAAACCAGATGCTGAATGCAAATTT  400

seq1  CAAAAGGTCTGTAGTTCTAAGATACGGATTGTGGATCATGGAGAAGCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGTCTGTAGTTCTAAGATACGGATTGTGGATCATGGAGAAGCAGG  450

seq1  GACTAGAAGGGTCTCAAGGGAGTTCCTGGTCTGCCTAGATACTTGTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGAAGGGTCTCAAGGGAGTTCCTGGTCTGCCTAGATACTTGTTGGA  500

seq1  AAGGCAACTTAGCTAGACAGGAGGCGGCATTAGTTTACTCCAGTGCATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAACTTAGCTAGACAGGAGGCGGCATTAGTTTACTCCAGTGCATGA  550

seq1  GGGTTATCCTGAAGTACAAGGAGACAGAATGGTAATGTGTTCATGTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATCCTGAAGTACAAGGAGACAGAATGGTAATGTGTTCATGTCTTC  600

seq1  TGATGTTGGAGACTGCTGTTCCAGACCCAGGAGACTCAGTGGTGCAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTGGAGACTGCTGTTCCAGACCCAGGAGACTCAGTGGTGCAGCCA  650

seq1  AAGGCCAGAGTACCAAGAGAATGGATAGTATAAGCTCAGAACTAAGTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAGGCCAGAGTACCAAGAGAATGGATAGTATAAGCTCAGAACTAATTCAG  700

seq1  AGTCAACAGGCAGAAGAGTTGCACCCAATTTGGAGACAATCAAGCAAAA-  749
      |||||||||||||||||||||||||||||||||||||||||||| |||| 
seq2  AGTCAACAGGCAGAAGAGTTGCACCCAATTTGGAGACAATCAAGAAAAAG  750

seq1  GGAAAGAGTTCTTCTTATTCATTCCTTTTGTTCTATTCAGGTCTCCAACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAGTTCTTCTTATTCATTCCTTTTGTTCTATTCAGGTCTCCAACT  800

seq1  AGCTGATGGAGTAGAGTCATCTGCACTGGGGTGGGGGACAGCTTGCTTCA  849
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGCTGATGGAGTAGAGTCATCTGCACTGAGGTGGGGGACAGCTTGCTTCA  850

seq1  C-CTCTACGGAGTCACATG-TTAACCCCACTT-GGAAACATTCTTGCAG-  895
      | |||||||||||||| || ||| |||||||| |||||||||||||||| 
seq2  CTCTCTACGGAGTCACGTGTTTACCCCCACTTGGGAAACATTCTTGCAGC  900

seq1  -AGTTGTCCAATTATCT-GGACAGCT  919
        ||||||||||||||| ||||||||
seq2  AGGTTGTCCAATTATCTGGGACAGCT  926