BAC Information

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BAC

Clone NameB6Ng01-291I18
Chromosome4 (Build37)
Map Location 146,250,256 - 146,363,734
singlet/doubletdoublet
Overlap geneLOC626288, LOC666498
Upstream geneLOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514
Downstream geneLOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291I18.bB6Ng01-291I18.g
ACCGA088403GA088404
length1,1441,120
definitionB6Ng01-291I18.b B6Ng01-291I18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,250,256 - 146,251,126)(146,362,587 - 146,363,734)
sequence
gaattcctgatcttcccaagccttttaccatgaatgggtgttggattttg
tcaaatgctttctcagcatctaacaagatgatcatgtgtttttttgtctt
tgtgtttgtttatgaagtggattatattgataaatttctgtatattaaac
catccctgcatccctggaatcaagcctacttgatcatgatggatgattgt
tttgatgagttcttggattcttttagtgagaattttattgagtatttttg
agttgatattcttaagggaaattggtttgaagttctctatctttgttggg
tctttatgtggtttaggtatcagagtaattgtggcctcatagaatgaatt
gggtaaagtaccttctgtttctctttagttgaatagtttgaggagaactg
gaattaggtcttctttgaaggtctgttagaaattctgcactaagtacatc
tggacctgggctttttttggttgagagacttttaatgactgcttttattt
ctttaggggttatgggattgcttatgtgatccgatttaactttggtacct
ggtaagtgtcaagaaaattgtccatttcatccaggttttccagttttgtt
gactataggattttatagtagaatgatttttttggatttctttggtttct
gttgttatgtctcccttttcgtttctgattttgttaatttggttactgtc
tctgtggtgtcttgttagtctcactaagggtttatctatcttgttgattt
tttcaaagaatcagctgttctgagtttgagtaaactaaggaatttctgag
ttattaaaactggcaagtaaactctaaattttccctgtagactcagtggt
tgaggctgagtgaaacttcaaggattctgatcccagggttctttattaag
tataatttttggaaagaaatttcttggtaataattgtcttagtcctctgt
gcacatgaaggtgaagtgtgactactcaaaagttcttttgcaagtacatg
tgtttctttttaaaggtggatctaaaattacggcctagagagaatcagcc
taacgtgtaaggaacccagcttgtaagtatcatgtcctatgtcccagatg
tttgttctcatggaaaacacaatacctagaattgttgtctgggc
gaattctcagactggttctatcagtaaagcatttgccacattcactgcat
ttgtaaggtttctctcctgtatgaattctctgatgcatagtaagattgaa
tttgtttttaaaacatttgtcacattcactacatttgtaaattttctctt
ctgtatgaattccctgatgaatactaagatggatctgatgggtaaagcat
ttgtcacttttactacttttgtaaggtttctttccatgataaattctctg
ctgactttgtagtttttctctctgggtaagatatttgtgaaattcactac
atttgtaagggttccctgcaatattgtcttttttcaccatgactttatgt
ttagaaacaaaaatcttgtctaattctgcatttcggttgtgttttttctt
ctgcatgttaattccttgattgagactaatggtagaaaacaaacttaaac
tgtttacagagtcattgtatttgcaaacttctttagtgttcctgggctta
agtcttttttgggtcgagaattgaagagcatcagagctgtgattagtttt
gtaaggtgtacactggagggattcaagaatgacattgctaaacttgtccc
atttagaagacttctcttgaatattcatgtgttcatggacaatgtactgg
ctgtcttgatccaataccttcccattctttccacgtatgcaatgattttc
tgaaaaaaaagggggggcaattagaggtgacatgaattacttatataagg
agtaagggactcaataatcagtgagcttatggattcgtactctcaagaaa
ggtttctctctctctctctctctctctctctctctctctctctgtgaatc
attacatgtatcctcagaagaacctcaaatatgatctatatcaaatgact
ggaaatgatataccctgctaaatgttattttcaattagacatcataccac
ctcaaatatattacccagaattgcctccaaagagtgacatgatgttgtac
tcactgatagtggatatttagctcagaaacttagaatacccagattatat
catacatttgtgaacaccatgaaccctcagaagacgagaccaagtttgca
ctttgcccttcttagattgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146250256_146251126
seq2: B6Ng01-291I18.b_332_1190

seq1  CTCTATCTTTGTTGGGTCTTTATGTGGTTTAGGTATCAGAGTAATTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCTTTGTTGGGTCTTTATGTGGTTTAGGTATCAGAGTAATTGTGG  50

seq1  CCTCATAGAATGAATTGGGTAAAGTACCTTCTGTTTCTCTTTAGTTGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAGAATGAATTGGGTAAAGTACCTTCTGTTTCTCTTTAGTTGAAT  100

seq1  AGTTTGAGGAGAACTGGAATTAGGTCTTCTTTGAAGGTCTGTTAGAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAGGAGAACTGGAATTAGGTCTTCTTTGAAGGTCTGTTAGAAATT  150

seq1  CTGCACTAAGTACATCTGGACCTGGGCTTTTTTTGGTTGAGAGACTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTAAGTACATCTGGACCTGGGCTTTTTTTGGTTGAGAGACTTTTA  200

seq1  ATGACTGCTTTTATTTCTTTAGGGGTTATGGGATTGCTTATGTGATCCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGCTTTTATTTCTTTAGGGGTTATGGGATTGCTTATGTGATCCGA  250

seq1  TTTAACTTTGGTACCTGGTAAGTGTCAAGAAAATTGTCCATTTCATCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTTTGGTACCTGGTAAGTGTCAAGAAAATTGTCCATTTCATCCAG  300

seq1  GTTTTCCAGTTTTGTTGACTATAGGATTTTATAGTAGAATGATTTTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCAGTTTTGTTGACTATAGGATTTTATAGTAGAATGATTTTTTTG  350

seq1  GATTTCTTTGGTTTCTGTTGTTATGTCTCCCTTTTCGTTTCTGATTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTTGGTTTCTGTTGTTATGTCTCCCTTTTCGTTTCTGATTTTGT  400

seq1  TAATTTGGTTACTGTCTCTGTGGTGTCTTGTTAGTCTCACTAAGGGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGGTTACTGTCTCTGTGGTGTCTTGTTAGTCTCACTAAGGGTTTA  450

seq1  TCTATCTTGTTGATTTTTTCAAAGAATCAGCTGTTCTGAGTTTGAGTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTTGTTGATTTTTTCAAAGAATCAGCTGTTCTGAGTTTGAGTAAA  500

seq1  CTAAGGAATTTCTGAGTTATTAAAACTGGCAAGTAAACTCTAAATTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAATTTCTGAGTTATTAAAACTGGCAAGTAAACTCTAAATTTTCC  550

seq1  CTGTAGACTCAGTGGTTGAGGCTGAGTGAAACTTCAA-GATTCTGATCCC  599
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGTAGACTCAGTGGTTGAGGCTGAGTGAAACTTCAAGGATTCTGATCCC  600

seq1  AGGGTTCTTTATTAAGTATAA-TTTTGGAAAGAAATTTCTTGGTAATAAT  648
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGGGTTCTTTATTAAGTATAATTTTTGGAAAGAAATTTCTTGGTAATAAT  650

seq1  TGTCTTAGTCCTCTGTGCACAATGAAGGTGAAGGTGTGACTACCTCAAAA  698
      |||||||||||||||||||| ||||||||||| ||||||||| |||||||
seq2  TGTCTTAGTCCTCTGTGCAC-ATGAAGGTGAA-GTGTGACTA-CTCAAAA  697

seq1  G-TCTTTTGCAAAGTACATGTGTTTCTTTTTTAAAGTTGGATTCTAAAAA  747
      | |||||||| ||||||||||||||| ||||||||| |||| ||| ||||
seq2  GTTCTTTTGC-AAGTACATGTGTTTC-TTTTTAAAGGTGGA-TCT-AAAA  743

seq1  TAAGGGCCTAGAGGAGGATCAAGCATACAGTGTAGAGGACACCAAGC-TG  796
      | | |||||||| ||| ||| ||| ||  ||||| |||| ||| ||| ||
seq2  TTACGGCCTAGA-GAGAATC-AGCCTAACGTGTA-AGGA-ACCCAGCTTG  789

seq1  TAAGGTACATGTCCTATGTCCCCCAAGGATGGTTTGTTCTCATGGAGAA-  845
      ||||   |||||||||||||||     ||| ||||||||||||||| || 
seq2  TAAGTATCATGTCCTATGTCCC----AGAT-GTTTGTTCTCATGGAAAAC  834

seq1  ACAATAACCTAGGATTGTTGTCTGGG  871
      ||||| |||||| |||||||||||||
seq2  ACAAT-ACCTAGAATTGTTGTCTGGG  859

seq1: chr4_146362587_146363734
seq2: B6Ng01-291I18.g_65_1184 (reverse)

seq1  CCAATTCTAAGAAGGGGCAAAGTGTCCATACTTTGGTCTTCATTCTTCTT  50
      |||| |||||||| ||||||||||  || || |||||||    ||||| |
seq2  CCAA-TCTAAGAA-GGGCAAAGTG--CAAAC-TTGGTCT--CGTCTTC-T  42

seq1  GAGTG-TCATGTGTTTCACAAATTGTATGATATATCTTGGGTATTCTAAG  99
      ||| | |||||   |||||||| |||||||||||   |||||||||||||
seq2  GAGGGTTCATGGTGTTCACAAA-TGTATGATATAATCTGGGTATTCTAAG  91

seq1  TTTCTGGGCT-AATATCCACTTATCAGTGAGTAC-ATATCATGTCACTTC  147
      |||||| ||| ||||||||| ||||||||||||| | |||||||||| ||
seq2  TTTCTGAGCTAAATATCCAC-TATCAGTGAGTACAACATCATGTCAC-TC  139

seq1  TTTTGGAGCAATTCTGGGTTATTATATTTGAGGTGGTATGATGTCTAATT  197
      ||| |  ||||||||||| || |||||||||||||||||||||||||| |
seq2  TTTGGAGGCAATTCTGGG-TAATATATTTGAGGTGGTATGATGTCTAA-T  187

seq1  TGAAAATAACATTTAGCAGGGTATTATCATTTCCAGTCATTTGATATAGA  247
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGAAAATAACATTTAGCAGGGTA-TATCATTTCCAGTCATTTGATATAGA  236

seq1  TCATATTTGAGGTTCTTCTGAGGATACATGTAATGATTCACAGAGAGAGA  297
      |||||||||||||||||||||||||||||||||||||||||         
seq2  TCATATTTGAGGTTCTTCTGAGGATACATGTAATGATTCAC---------  277

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACC  347
             ||||||||||||||||||||||||||||||||||||||| |||
seq2  -------AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACC  320

seq1  TTTCTTGAGAGTACGAATCCATAAGCTCACTGATTATTGAGTCCCTTACT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGAGAGTACGAATCCATAAGCTCACTGATTATTGAGTCCCTTACT  370

seq1  CCTTATATAAGTAATTCATGTCACCTCTAATTGCCCCCCCTTTTTTTTTC  447
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCTTATATAAGTAATTCATGTCACCTCTAATTGCCCCCCC-TTTTTTTTC  419

seq1  AGAAAATCATTGCATACATGGAAAGAATGGGAAGGTATTGGATCAAGACA  497
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGAAAATCATTGCATACGTGGAAAGAATGGGAAGGTATTGGATCAAGACA  469

seq1  GCCAGTACATTGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTACATTGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAA  519

seq1  TGGGACAAGCTTAGCAATGTCATTCTTGAATCCCTCCAGTGTACACCTTA  597
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAAGTTTAGCAATGTCATTCTTGAATCCCTCCAGTGTACACCTTA  569

seq1  CAAAACTAATCACAGCTCTGATGCTCTTCAATTCTCGAACCAAAAAAGAC  647
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAAAACTAATCACAGCTCTGATGCTCTTCAATTCTCGACCCAAAAAAGAC  619

seq1  TTAAGCCCAGGAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCCAGGAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAAC  669

seq1  AGTTTAAGTTTGTTTTCTACCATTAGTCTCAATCAAGGAATTAACATGCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAGTTTGTTTTCTACCATTAGTCTCAATCAAGGAATTAACATGCA  719

seq1  GAAGAAAAAACACAACCGAAATGCAGAATTAGACAAGATTTTTGTTTCTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAAACACAACCGAAATGCAGAATTAGACAAGATTTTTGTTTCTA  769

seq1  AACATAAAGTCATGGTGAAAAAAGACAATATTGCGGGGAACCCTTACAAA  847
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACATAAAGTCATGGTGAAAAAAGACAATATTGCAGGGAACCCTTACAAA  819

seq1  TGTAGTGAATTTCACAAATATCTTACCCAGAGAGAAAACCTACAAAGTCA  897
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGTAGTGAATTTCACAAATATCTTACCCAGAGAGAAAAACTACAAAGTCA  869

seq1  GCAGAGAATTTATCATGGAAAGAAACCTTACAAAAGTAGTAAAAGTGACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAATTTATCATGGAAAGAAACCTTACAAAAGTAGTAAAAGTGACA  919

seq1  AATGCTTTACCCATCAGATCCATCTTAGTATTCATCAGGGAATTCATACA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTACCCATCAGATCCATCTTAGTATTCATCAGGGAATTCATACA  969

seq1  GAAGAGAAAATTTGCAAATGTAGTGAATGTGACAAATGTTTTAAAAACAA  1047
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAAATTTACAAATGTAGTGAATGTGACAAATGTTTTAAAAACAA  1019

seq1  ATTCAATCTTACTATGCATCAGAGAATTCATACAGGAGAGAAACCTTACA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATCTTACTATGCATCAGAGAATTCATACAGGAGAGAAACCTTACA  1069

seq1  AATGCAGTGAATGTGGCAAATGCTTTACTGATAAAACCAGTCTGAGAATT  1147
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATGCAGTGAATGTGGCAAATGCTTTACTGATAGAACCAGTCTGAGAATT  1119

seq1  C  1148
      |
seq2  C  1120