BAC Information

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BAC

Clone NameB6Ng01-291L11
Chromosome4 (Build37)
Map Location 7,077,822 - 7,275,422
singlet/doubletdoublet
Overlap geneLOC666700
Upstream gene3110003A22Rik, Cyp7a1, Sdcbp, Nsmaf, LOC100039397, LOC100039414, Tox, LOC100039421
Downstream geneCar8, LOC100039494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291L11.bB6Ng01-291L11.g
ACCGA088533GA088534
length1,1411,145
definitionB6Ng01-291L11.b B6Ng01-291L11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,274,278 - 7,275,422)(7,077,822 - 7,078,989)
sequence
gaattctttggcaaatactcaggattgggagaagaaaaataaccacttta
catggaagcacatgacacagaggcagagtctccagcagttaagtgaggga
aggctggcaagattatttgagagcaagattgtgttttccaagattagcaa
tgagtttaacaatgaacttctatcaatgctcaaagagaagattgtaaact
gcctactttgcaaaggttcgtttgtcagcactagttgcagcgtcgtgcta
acaatgatgtaaaaccaaagcagtcaccctacaatttagggaatgccaac
agcagccctgcacatcaacaacagggtacagtctctgctaatcaaattcc
tctctttgtttcatcatgaacacatatctaaatttagtgaatgagccaaa
gactggaacttccaactttgtcaaaatgtgatggcaattaagtgacacct
catctttgaagaaatgcatttttcaagtccttgacagtaaaaaactattt
agattatttacaacatttccaatgagttagtaaccttttttattacatta
cattttgcataatataatttgtcactatttctttattaagcttgttttat
attcataggggtcccacaacactatatttttcctctttgtcagcccagaa
cttcattatgaaggatgaggttttatggtttcccagcgatgcaaatgtct
acagtgagtaagtatcattatgcaggaacaggaatttagttttcctccat
taaccaggcaggctaatgactcaacaagtttatagcttgccacaaaattt
gatggctcaatgtgagttagaacaaatgagggtgctgtggatatacagag
tagaaagatgcacttcttttcttttggaacattttctaactttcctaatt
tgaagtccatttttttttgtttgttttgttttgttttttgttgttgtttg
cttgctttatcatctgaatgagaagggagtcctctgttcatcatctcccc
tagagggaaatacaactttagtctctgctttcagtagttcaacacaatca
aatcatatctctgagatcccgctcagctgggtgagcaaaatcatataggt
agccaatcacacctgttgaagcaacctttttcaatgacatg

gaattccttaaattctcctccaataaattctctttaaatttctttgcatc
tgtcatatttggctattgatcaaatcagaccatgattctgcagcctgaga
cagtgactcatcattattcatcaggagcctctggagttctcaggtgatgc
tctctggctttgcttgagtcctgcgcagggcagcatggagttgtaagttt
ggttgggcagcaagcagtgaaaggactttgtggacatccaaggcagtggg
gacaatcttgtctaggtgtcctgattgtcctttacagtctctcatccttc
agttggctagaattcctttcttcctcttccttgctttctcctttttcctc
ctctcattctattctcttcctctttgttttcttaaatcaaggtctcactt
gttgcataggctgatctggaactcatcctgactttccaaatgtctagcac
tgtgctcagtttttttcttgaataactatcttaaagaaaataatcagagg
caattaagtctgaaaatctgatctcagggagacatagctgtttatccttt
gcattcaattggtcaaaacagttcacaatattagttttaattcagagaaa
gaagaggggaggggaatgtcacctcctgggaagataaacaaaagtttcat
agaagatgtgaacatgctggactgggaggcatttgcagctatcattttaa
agaatttatttaatttattaaattttatcgttttgggtcaaatagtttat
ttctgtaagtcccaagaaccaactcatgttgtttatagatcaagaacaaa
ctgaagcatttatggtcaatctagtcaaagtagcaaacagataaccatca
actcggcctgtcctctcaatttggatacaggtccgatttgttagaatttc
ctgccacttggagaggtatctgaccatgtattaactctcagttcagaaac
aaaatgaactcaaactgtgtaatgaaccagcacccttttaactagctgac
catcagtgtagctcttcatgtaatgaaaccccatttcttgttacttttct
ttcttgtgtccactgacttcatgcatacatgaaccaatgtcagtatctct
aagcactgcatatgcaatgtgtagttccagcagatcatcttgcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_7274278_7275422
seq2: B6Ng01-291L11.b_51_1191 (reverse)

seq1  CATGTCATGGAAAAAGTTTTGCTT-TACAGGTGTGATTGCCTA-CTATAT  48
      |||||||| |||||||  ||||||  ||||||||||||| ||| ||||||
seq2  CATGTCATTGAAAAAG-GTTGCTTCAACAGGTGTGATTGGCTACCTATAT  49

seq1  GATTTTTGCTCA-CCAGCTGAGCGGGATCTCAGAAGATAATGATTTGA-T  96
      || ||||||||| |||||||||||||||||||| |||| ||||||||| |
seq2  GA-TTTTGCTCACCCAGCTGAGCGGGATCTCAG-AGAT-ATGATTTGATT  96

seq1  GTGTTGAACTACTGAAAGCAGAGAACTAAAGTTGTATTTCCCTCTAGGGG  146
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTGTTGAACTACTGAAAGCAGAG-ACTAAAGTTGTATTTCCCTCTAGGGG  145

seq1  AGATGATGAACAGAGGACTCCCTTCTCATTCAGATGATAAAGCAAGCAAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATGAACAGAGGACTCCCTTCTCATTCAGATGATAAAGCAAGCAAA  195

seq1  CAAACAAACAAAAAACAAAACAAAACAAAACAAAAAAAAATGGACTTCAA  246
      |||   |||||||||||||||||||| |||||||||||||||||||||||
seq2  CAA--CAACAAAAAACAAAACAAAAC-AAACAAAAAAAAATGGACTTCAA  242

seq1  ATTAGGAAAGTTAGAAAATGTTCCAAAAGAAAAGAAGTGCATCTTTCTAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAAAGTTAGAAAATGTTCCAAAAGAAAAGAAGTGCATCTTTCTAC  292

seq1  TCTGTATATCCACAGCACCCTCATTTGTTCTAACTCACATTGAGCCATCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATATCCACAGCACCCTCATTTGTTCTAACTCACATTGAGCCATCA  342

seq1  AATTTTGTGGCAAGCTATAAACTTGTTGAGTCATTAGCCTGCCTGGTTAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTGGCAAGCTATAAACTTGTTGAGTCATTAGCCTGCCTGGTTAA  392

seq1  TGGAGGAAAACTAAATTCCTGTTCCTGCATAATGATACTTACTCACTGTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAAACTAAATTCCTGTTCCTGCATAATGATACTTACTCACTGTA  442

seq1  GACATTTGCATCGCTGGGAAACCATAAAACCTCATCCTTCATAATGAAGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTGCATCGCTGGGAAACCATAAAACCTCATCCTTCATAATGAAGT  492

seq1  TCTGGGCTGACAAAGAGGAAAAATATAGTGTTGTGGGACCCCTATGAATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCTGACAAAGAGGAAAAATATAGTGTTGTGGGACCCCTATGAATA  542

seq1  TAAAACAAGCTTAATAAAGAAATAGTGACAAATTATATTATGCAAAATGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAGCTTAATAAAGAAATAGTGACAAATTATATTATGCAAAATGT  592

seq1  AATGTAATAAAAAAGGTTACTAACTCATTGGAAATGTTGTAAATAATCTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAATAAAAAAGGTTACTAACTCATTGGAAATGTTGTAAATAATCTA  642

seq1  AATAGTTTTTTACTGTCAAGGACTTGAAAAATGCATTTCTTCAAAGATGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTTTTTACTGTCAAGGACTTGAAAAATGCATTTCTTCAAAGATGA  692

seq1  GGTGTCACTTAATTGCCATCACATTTTGACAAAGTTGGAAGTTCCAGTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCACTTAATTGCCATCACATTTTGACAAAGTTGGAAGTTCCAGTCT  742

seq1  TTGGCTCATTCACTAAATTTAGATATGTGTTCATGATGAAACAAAGAGAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCATTCACTAAATTTAGATATGTGTTCATGATGAAACAAAGAGAG  792

seq1  GAATTTGATTAGCAGAGACTGTACCCTGTTGTTGATGTGCAGGGCTGCTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGATTAGCAGAGACTGTACCCTGTTGTTGATGTGCAGGGCTGCTG  842

seq1  TTGGCATTCCCTAAATTGTAGGGTGACTGCTTTGGTTTTACATCATTGTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATTCCCTAAATTGTAGGGTGACTGCTTTGGTTTTACATCATTGTT  892

seq1  AGCACGACGCTGCAACTAGTGCTGACAAACGAACCTTTGCAAAGTAGGCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGACGCTGCAACTAGTGCTGACAAACGAACCTTTGCAAAGTAGGCA  942

seq1  GTTTACAATCTTCTCTTTGAGCATTGATAGAAGTTCATTGTTAAACTCAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAATCTTCTCTTTGAGCATTGATAGAAGTTCATTGTTAAACTCAT  992

seq1  TGCTAATCTTGGAAAACACAATCTTGCTCTCAAATAATCTTGCCAGCCTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATCTTGGAAAACACAATCTTGCTCTCAAATAATCTTGCCAGCCTT  1042

seq1  CCCTCACTTAACTGCTGGAGACTCTGCCTCTGTGTCATGTGCTTCCATGT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACTTAACTGCTGGAGACTCTGCCTCTGTGTCATGTGCTTCCATGT  1092

seq1  AAAGTGGTTATTTTTCTTCTCCCAATCCTGAGTATTTGCCAAAGAATTC  1145
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGTTATTTTTCTTCTCCCAATCCTGAGTATTTGCCAAAGAATTC  1141


seq1: chr4_7077822_7078989
seq2: B6Ng01-291L11.g_66_1210

seq1  GAATTCCTTAAATTCTCCTCCAATAAATTCTCTTTAAATTTCTTTGCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAATTCTCCTCCAATAAATTCTCTTTAAATTTCTTTGCATC  50

seq1  TGTCATATTTGGCTATTGATCAAATCAGACCATGATTCTGCAGCCTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATATTTGGCTATTGATCAAATCAGACCATGATTCTGCAGCCTGAGA  100

seq1  CAGTGACTCATCATTATTCATCAGGAGCCTCTGGAGTTCTCAGGTGATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACTCATCATTATTCATCAGGAGCCTCTGGAGTTCTCAGGTGATGC  150

seq1  TCTCTGGCTTTGCTTGAGTCCTGCGCAGGGCAGCATGGAGTTGTAAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGCTTTGCTTGAGTCCTGCGCAGGGCAGCATGGAGTTGTAAGTTT  200

seq1  GGTTGGGCAGCAAGCAGTGAAAGGACTTTGTGGACATCCAAGGCAGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGCAGCAAGCAGTGAAAGGACTTTGTGGACATCCAAGGCAGTGGG  250

seq1  GACAATCTTGTCTAGGTGTCCTGATTGTCCTTTACAGTCTCTCATCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATCTTGTCTAGGTGTCCTGATTGTCCTTTACAGTCTCTCATCCTTC  300

seq1  AGTTGGCTAGAATTCCTTTCTTCCTCTTCCTTGCTTTCTCCTTTTTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCTAGAATTCCTTTCTTCCTCTTCCTTGCTTTCTCCTTTTTCCTC  350

seq1  CTCTCATTCTATTCTCTTCCTCTTTGTTTTCTTAAATCAAGGTCTCACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATTCTATTCTCTTCCTCTTTGTTTTCTTAAATCAAGGTCTCACTT  400

seq1  GTTGCATAGGCTGATCTGGAACTCATCCTGACTTTCCAAATGTCTAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCATAGGCTGATCTGGAACTCATCCTGACTTTCCAAATGTCTAGCAC  450

seq1  TGTGCTCAGTTTTTTTCTTGAATAACTATCTTAAAGAAAATAATCAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCAGTTTTTTTCTTGAATAACTATCTTAAAGAAAATAATCAGAGG  500

seq1  CAATTAAGTCTGAAAATCTGATCTCAGGGAGACATAGCTGTTTATCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAGTCTGAAAATCTGATCTCAGGGAGACATAGCTGTTTATCCTTT  550

seq1  GCATTCAATTGGTCAAAACAGTTCACAATATTAGTTTTAATTCAGAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCAATTGGTCAAAACAGTTCACAATATTAGTTTTAATTCAGAGAAA  600

seq1  GAAGAGGGGAGGGGAATGTCACCTCCTGGGAAGATAAACAAAAGTTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGGGAGGGGAATGTCACCTCCTGGGAAGATAAACAAAAGTTTCAT  650

seq1  AGAAGATGTGAACATGCTGGACTGGGAGGCATTTGCAGCTATCATTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGTGAACATGCTGGACTGGGAGGCATTTGCAGCTATCATTTTAA  700

seq1  AGAATTTATTTAATTTATTAAATTTTATCGTTTTGGGTCAAATAGTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTATTTAATTTATTAAATTTTATCGTTTTGGGTCAAATAGTTTAT  750

seq1  TTCTGTAAGTCCCAAGAACCAACTCATGTTGTTTATAGATCAAGAACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAAGTCCCAAGAACCAACTCATGTTGTTTATAGATCAAGAACAAA  800

seq1  CTGAAGCATTTATGGTCAATCTAGTCAAAGTAGCAAACAGATAACCATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCATTTATGGTCAATCTAGTCAAAGTAGCAAACAGATAACCATCA  850

seq1  ACTCGGCCTGTCCTCTCAAATTTGGATACAGGTCCGATTTGTTAGAATTT  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACTCGGCCTGTCCTCTC-AATTTGGATACAGGTCCGATTTGTTAGAATTT  899

seq1  CCTGCCACTTGGAGAGGTATCTGACCATGTATTAACTCTCAGTTCAAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCTGCCACTTGGAGAGGTATCTGACCATGTATTAACTCTCAGTTC-AGAA  948

seq1  ACAAAATGAAACTCAAACTGTGTAATGGAACCAGCAACCCTTTTAAACTA  1000
      |||||||| ||||||||||||||||| |||||||| |||||||| |||||
seq2  ACAAAATG-AACTCAAACTGTGTAAT-GAACCAGC-ACCCTTTT-AACTA  994

seq1  GCTGACCATCAGGTGTAGGCTCTTCCATGTTAATGAAAACCCCATTTTCT  1050
      ||||||||||| ||||| |||||| |||| ||||| |||||||| |||||
seq2  GCTGACCATCA-GTGTA-GCTCTT-CATG-TAATG-AAACCCCA-TTTCT  1038

seq1  TTTGTTTTACTTTTCTTTCTTTGTGT-CACTGACTCCATGCAATACATAG  1099
          | ||||||||||||| |||||| |||||||| ||||| ||||||  
seq2  ----TGTTACTTTTCTTTC-TTGTGTCCACTGACTTCATGC-ATACATGA  1082

seq1  ACCAATGTCAGTATCTCTTAGAGGCACTGCATATGCAATGTGTAGGTCCA  1149
      ||||||||||||||||||   | |||||||||||||||||||||| ||||
seq2  ACCAATGTCAGTATCTCT---AAGCACTGCATATGCAATGTGTAGTTCCA  1129

seq1  GCAGGAGTCATCTTTGCCA  1168
      ||||   ||||| ||||||
seq2  GCAG--ATCATC-TTGCCA  1145


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