BAC Information

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BAC

Clone NameB6Ng01-291M14
Chromosome4 (Build37)
Map Location 146,327,019 - 146,327,821
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498
Downstream geneLOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291M14.bB6Ng01-291M14.g
ACCGA088585GA088586
length1,0131,196
definitionB6Ng01-291M14.b B6Ng01-291M14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaccctgctccacaagtgcagcagagtgcttttaattactgagc
tgcctccccaagcctctaaatcacttcttaatatgcaggaatgtatataa
actggcaacatatccttggcaacctcactaaaactgtgatatagctctaa
atgtcacacaggatgagcaatgataaatacttacaaagtttaaaaaaaaa
aaaaagaaaaagactggagctggacacttagagctagcttcaaagcacaa
ggccctctcctgtcctctgcagctacctgcacttgtgtgtgtgtgtggcc
tgcgtactgtccgtaggtgtgtgggtctatttttgggtctcctattgaat
tccattaatccacctacttatttctttctataccagtaccatacaacttt
ttattactatttttctgccatacatctttaagttacagaaattgatagct
ccagatttttttttgttgttcaagaatattttatctatcctgtggttttt
gttttgtttactgttccatacaacgttgagaatatttctttcaagatctg
tgaagatttgtgctaaatttttgataagaattgtactgagtgtctagatt
gctttttggtaagatggacatattcattatgttaatcctattgatacatg
aacaagggagatcttttcatgttctgatatcttcctgtttctttcttaag
atactttaagttcttctcctacaggttttcacttgcttgtttagaggtaa
ctgaaggtattttattttgtttgtggctaaagtggagggttctgtttcca
taacttctttttcaaccctcttaatcaattgtgtgtagcaggctaaggct
ttctttaagtcaattgtgtatgaagacactttgctaaaatgtttatcaac
tgtaattttttggtagaattttttgtctcacttatatacattatcataat
atctgaatttcttcttttccaaattgtattcccttgatctcttaagctgc
tttattgctgagc
gaattctgtaggcttcttgtatgttcatgggcatctctttctttagatta
gggaagttttcttctataattttattgaagatgtttactggccctttaag
ttgggaatcttcactctcttctatacctattatccttaggtttggtcttt
tcattgtctcctgggtttcctggatgttttgtgttaggagctttttgctt
tttgcattttcttttacagttgtgtcaatgttttctatggtgtcttctac
acctgagattctctcttctattctgttggtgatgcttgtatgtatgaccc
ctgatctctttcctaggttttctaactccaaggttatctccctttgtgat
ttcttgtttattgtttctgtttccatttttagatcctggatggttttggt
caattccttcccctgtttggtcgtgttttcctgctattttttaaagggat
ttttgtgttttctctttaagattttctacctgctaacctgtgttcttctg
tatttctttaaggtagttatttatatccttcttacagtcctctatcatca
tcatgagatgtgattttaaacagagtcttgcttttcctgtgtgttggggt
attattcatggctcactgtggtaggagaactgggttctaattatgccaag
tagccttggttttctgttgcttatgttcttgcccttgcctcttgccatct
ggttatctctggtgttagctggtctttctgtctctgactgtgtcttgtcc
ctcctgcaagcctgtgtaactcctgggagactagttctctctgggaaaaa
tttgggtaacaagggctatggcacagggtcagctctgggatgcagatgga
agccagaaaggatcccgtcccaggctgtgccttggttcctgtgtcctgat
cgctctggctgggtcgctcttgggccaggattttgagcagagttgtggtc
tacctgtgctcaacaagtacattgtgctcctgggagttcaatttttcctg
atgtatttgggtatgcatcactgtgcaacaggatcagcttcccagtgcag
aatgaactgatgatcttgtccagcgtctcgatccgtgttcaatgaagctc
tgctgatctcttgagaccatattgtgtctacctgggactacgagttacac
ctcctgaaagaacagtgagctttccacagggtttgtggcactatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146327019_146327821
seq2: B6Ng01-291M14.b_45_847

seq1  GAATTCAACCCTGCTCCACAAGTGCAGCAGAGTGCTTTTAATTACTGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCCTGCTCCACAAGTGCAGCAGAGTGCTTTTAATTACTGAGC  50

seq1  TGCCTCCCCAAGCCTCTAAATCACTTCTTAATATGCAGGAATGTATATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCCAAGCCTCTAAATCACTTCTTAATATGCAGGAATGTATATAA  100

seq1  ACTGGCAACATATCCTTGGCAACCTCACTAAAACTGTGATATAGCTCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAACATATCCTTGGCAACCTCACTAAAACTGTGATATAGCTCTAA  150

seq1  ATGTCACACAGGATGAGCAATGATAAATACTTACAAAGTTTAAAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACACAGGATGAGCAATGATAAATACTTACAAAGTTTAAAAAAAAA  200

seq1  AAAAAGAAAAAGACTGGAGCTGGACACTTAGAGCTAGCTTCAAAGCACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAAGACTGGAGCTGGACACTTAGAGCTAGCTTCAAAGCACAA  250

seq1  GGCCCTCTCCTGTCCTCTGCAGCTACCTGCACTTGTGTGTGTGTGTGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTCTCCTGTCCTCTGCAGCTACCTGCACTTGTGTGTGTGTGTGGCC  300

seq1  TGCGTACTGTCCGTAGGTGTGTGGGTCTATTTTTGGGTCTCCTATTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTACTGTCCGTAGGTGTGTGGGTCTATTTTTGGGTCTCCTATTGAAT  350

seq1  TCCATTAATCCACCTACTTATTTCTTTCTATACCAGTACCATACAACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTAATCCACCTACTTATTTCTTTCTATACCAGTACCATACAACTTT  400

seq1  TTATTACTATTTTTCTGCCATACATCTTTAAGTTACAGAAATTGATAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTATTTTTCTGCCATACATCTTTAAGTTACAGAAATTGATAGCT  450

seq1  CCAGATTTTTTTTTGTTGTTCAAGAATATTTTATCTATCCTGTGGTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTTTTTTTTGTTGTTCAAGAATATTTTATCTATCCTGTGGTTTTT  500

seq1  GTTTTGTTTACTGTTCCATACAACGTTGAGAATATTTCTTTCAAGATCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTACTGTTCCATACAACGTTGAGAATATTTCTTTCAAGATCTG  550

seq1  TGAAGATTTGTGCTAAATTTTTGATAAGAATTGTACTGAGTGTCTAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATTTGTGCTAAATTTTTGATAAGAATTGTACTGAGTGTCTAGATT  600

seq1  GCTTTTTGGTAAGATGGACATATTCATTATGTTAATCCTATTGATACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTGGTAAGATGGACATATTCATTATGTTAATCCTATTGATACATG  650

seq1  AACAAGGGAGATCTTTTCATGTTCTGATATCTTCCTGTTTCTTTCTTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGGAGATCTTTTCATGTTCTGATATCTTCCTGTTTCTTTCTTAAG  700

seq1  ATACTTTAAGTTCTTCTCCTACAGGTTTTCACTTGCTTGTTTAGAGGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTAAGTTCTTCTCCTACAGGTTTTCACTTGCTTGTTTAGAGGTAA  750

seq1  CTGAAGGTATTTTATTTTGTTTGTGGCTAAAGTGGAGGGTTCTGTTTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGTATTTTATTTTGTTTGTGGCTAAAGTGGAGGGTTCTGTTTCCA  800

seq1  TAA  803
      |||
seq2  TAA  803