BAC Information

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BAC

Clone NameB6Ng01-291M17
Chromosome4 (Build37)
Map Location 15,698,582 - 15,699,679
singlet/doubletsinglet
Overlap genenone
Upstream gene1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1, Tmem64, LOC100040095
Downstream geneLOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291M17.bB6Ng01-291M17.g
ACCGA088591GA088592
length1,2471,099
definitionB6Ng01-291M17.b B6Ng01-291M17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttgatggtctt
tttgtcttattgacggtgtcttttgccttgcagaacctttggagtttcat
gaggtcccatttgtcaattctcgatcttacagcacaagccattcctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttgaatggttt
attttatcttttattttttaactttttattgattctttgtgaatttcaca
tcatgcatcctagtctctctcatctttccatccctctatattagtcctta
tcccttgcaactaaaagatcctggcagaatgtaaaagacacagaagccct
gaaattggcaagatagacgtcagtgttagcagaactagcttcactgattt
agaaaaatagaggtgcacaatgctctggccactccttgaacctgtgtgtc
tgccaatgttctgcaccttcattagactctttccttgtacccctcccata
accattttttgagaatagacattgtttagatctggaaatcccctaatctc
ccccttctcattccccccctgagggcccataaaaactgggacctctttcc
cctcgaggtcgactcctctacccctgcgtgggatatgagtcatccccaga
gctctggctttcccgaataaagcctcatgtggtttgcaacaagctcggtc
tgtcgtgagttcttgggtgtccgctattgtcctgaggcctgagcgagggg
ctcctcctggagtctttcacaacctcccccctaagaaaacaaacaacaca
aaacaaaacacagaagactcccattgtggaagctatagtatgtcacatta
tttctcgaagtataccctatgtctatacatctttacttgcaaatatcagt
tgcatgagtcataagtctgttttgaggcctctgccttctgcacattatca
tactgatcctcattgttgttgctcatgtcatggagaatcctgcagccttg
gtctggtgtatcagcccctccacttggcctctaaccagtcaatagaatga
gtaaaatatcgaaatggttcagcttagcccgattccagtctgcatgtagc
cgagtgccgggttgtacaactcctgcgcgagacgacctctctccctg
gaattcaagaatttctttgtgcacccacaacaggctttgtgcaccagaat
agtggttgcctaaagaatctgtttttacttgtacatcttatatttaagtt
gtctgcctagtggtttggcctatttttttttttcgagacagggtttctat
gtgtagccctggctgtcctggaactcactctgtagaccaggctggcctca
aactcagaaatctcgcctgcctctgcctcccaactgctgggattaaaggc
gtgcgccaccaccgccccggcaggtttggcctattctttaccttattcct
actttgtgctgccacctctctaatacatagatattagaactagacccatt
tggtctaaaaagaaaacagatcctgcttcaagattccaggagggaagcct
ccaggccatggaaacagtcatcattagaaagatttaccagaggaggtaaa
ggtaaacagctcctctcagaaaaagatagggaaggaatccatgaagacag
aataaaggagaggtctaggaagcctgaaattcccaaaattctgcctttga
aacagtaacgaaagatagaccccattattagaactatggaagctcagtgt
gatgagttccaactgcagccccagcatgtaaaagatggaggcagaaagtt
taggaattcaaggttatcttcgtgtgcatagtaagcttgaagccaaccat
agtacattagatcctatttaaaaacaaaatcaaaccaaaaatggggaagg
ggagagctataaccaaaaatagagattatgaagaagctttatggaagacc
actattctgtaagctacttacaaatcataattaatattaacatctgaggg
agatgagtctactgtgatcaacctcattttaggacaagaatatggagccc
atgtagaggctcagacctgtatgcatatgaatgtatgaacttaagtccca
aggtcatctgggtttgtagtattttgtctcttttgtttgtttttcttttt
atctgaagaaggcagagcttgcatcatgtagtgtggagtttttcttacat
gatgctttcagtgtcatgtcttccaacaaacaggcaaggtcacagaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_15698582_15699679
seq2: B6Ng01-291M17.g_67_1165

seq1  GAATTCAAGAATTTCTTTGTGCACCCACAACAGGCTTTGTGCACCAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAATTTCTTTGTGCACCCACAACAGGCTTTGTGCACCAGAAT  50

seq1  AGTGGTTGCCTAAAGAATCTGTTTTTACTTGTACATCTTATATTTAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTGCCTAAAGAATCTGTTTTTACTTGTACATCTTATATTTAAGTT  100

seq1  GTCTGCCTAGTGGTTTGGCCTATTTTTTTTTTTCGAGACAGGGTTTCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCCTAGTGGTTTGGCCTATTTTTTTTTTTCGAGACAGGGTTTCTAT  150

seq1  GTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCA  200

seq1  AACTCAGAAATCTCGCCTGCCTCTGCCTCCCAACTGCTGGGATTAAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAAATCTCGCCTGCCTCTGCCTCCCAACTGCTGGGATTAAAGGC  250

seq1  GTGCGCCACCACCGCCCCGGCAGGTTTGGCCTATTCTTTACCTTATTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGCCACCACCGCCCCGGCAGGTTTGGCCTATTCTTTACCTTATTCCT  300

seq1  ACTTTGTGCTGCCACCTCTCTAATACATAGATATTAGAACTAGACCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTGCTGCCACCTCTCTAATACATAGATATTAGAACTAGACCCATT  350

seq1  TGGTCTAAAAAGAAAACAGATCCTGCTTCAAGATTCCAGGAGGGAAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTAAAAAGAAAACAGATCCTGCTTCAAGATTCCAGGAGGGAAGCCT  400

seq1  CCAGGCCATGGAAACAGTCATCATTAGAAAGATTTACCAGAGGAGGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCATGGAAACAGTCATCATTAGAAAGATTTACCAGAGGAGGTAAA  450

seq1  GGTAAACAGCTCCTCTCAGAAAAAGATAGGGAAGGAATCCATGAAGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACAGCTCCTCTCAGAAAAAGATAGGGAAGGAATCCATGAAGACAG  500

seq1  AATAAAGGAGAGGTCTAGGAAGCCTGAAATTCCCAAAATTCTGCCTTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGGAGAGGTCTAGGAAGCCTGAAATTCCCAAAATTCTGCCTTTGA  550

seq1  AACAGTAACGAAAGATAGACCCCATTATTAGAACTATGGAAGCTCAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAACGAAAGATAGACCCCATTATTAGAACTATGGAAGCTCAGTGT  600

seq1  GATGAGTTCCAACTGCAGCCCCAGCATGTAAAAGATGGAGGCAGAAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTTCCAACTGCAGCCCCAGCATGTAAAAGATGGAGGCAGAAAGTT  650

seq1  TAGGAATTCAAGGTTATCTTCGTGTGCATAGTAAGCTTGAAGCCAACCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATTCAAGGTTATCTTCGTGTGCATAGTAAGCTTGAAGCCAACCAT  700

seq1  AGTACATTAGATCCTATTTAAAAACAAAATCAAACCAAAAATGGGGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATTAGATCCTATTTAAAAACAAAATCAAACCAAAAATGGGGAAGG  750

seq1  GGAGAGCTATAACCAAAAATAGAGATTATGAAGAAGCTTTATGGAAGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCTATAACCAAAAATAGAGATTATGAAGAAGCTTTATGGAAGACC  800

seq1  ACTATTCTGTAAGCTACTTACAAATCATAATTAATATTAACATCTGAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCTGTAAGCTACTTACAAATCATAATTAATATTAACATCTGAGGG  850

seq1  AGATGAGTCTACTGTGATCAACCTCATTTTAGGACAAGAATATGGAGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGTCTACTGTGATCAACCTCATTTTAGGACAAGAATATGGAGCCC  900

seq1  ATGTAGAGGCTCAGACCTGTATGCATATGAATGTATGAACTTAAGTCCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAGGCTCAGACCTGTATGCATATGAATGTATGAACTTAAGTCCCA  950

seq1  AGGTCATCT-GGTTTGTAGTATTTTGTTCTCTTTTGTTTGTTTTTCTTTT  999
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  AGGTCATCTGGGTTTGTAGTATTTTG-TCTCTTTTGTTTGTTTTTCTTTT  999

seq1  TTATTCTGAAAGAAGCAGAGCTTGCATCATGTAGTGTGGAAGTTTTCTTA  1049
      |   ||||||  | ||||||||||||||||||||||||||  ||||||||
seq2  T--ATCTGAAGAAGGCAGAGCTTGCATCATGTAGTGTGGAGTTTTTCTTA  1047

seq1  CATGATGC-TTCAGTGTCATGTCT--CCACAAACAGCCAGGTCCACAGAA  1096
      |||||||| |||||||||||||||  | |||||||| || |  |||||||
seq2  CATGATGCTTTCAGTGTCATGTCTTCCAACAAACAGGCAAGGTCACAGAA  1097

seq1  TC  1098
      ||
seq2  TC  1099