BAC Information

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BAC

Clone NameB6Ng01-293D21
Chromosome4 (Build37)
Map Location 83,308,387 - 83,309,487
singlet/doubletsinglet
Overlap gene4930473A06Rik
Upstream geneZdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik, Snapc3, Psip1, LOC100040611
Downstream geneLOC668010, Bnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293D21.bB6Ng01-293D21.g
ACCGA089672GA089673
length1,1961,104
definitionB6Ng01-293D21.b B6Ng01-293D21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctatagctgggctacaagaaaaagaaaaacaaagtcctaggaag
acccacagatgcaccagctagcactacccaaaaagaaagcttaaggtggg
gatatgaatactacaggcagccagagaaggggtcctgcacttcctagctg
ctcactgcagcagtggacagaaactagtttaggaattttacaatgaaacc
ttgcacttgggaagagcaatagatcatgccttttagtttctcatggcctc
tctcctttcactggttgggagagccatcaccccagaagttttactctagc
ttgtcagtatttgatgtcttagtgaaagcaataaggcaagagaaagaaat
aaaaggatacagaaacaggaaacgtacttgctgacaatatgatcctagat
gttaaaaaccccaaagaccccacagaaaacgcatacacttcataaacaca
tttatcaaactaacaggtcataaaatcaacaattaaaaaaaaaagttttc
ctacaaacaaaccaaaaaaatgaaaacaaggttagaaagaaatcaggaaa
ctagctccactcacaatgaccttgcagggggcatgggagagagttactgg
aaatgagaccaagcaagacatcaaatacatcttccattttttaagacatc
tgtcttagagggactagccaaccaatgactggcccaaattgagactcatc
tcacaggcaagaaccaatccctaacactattagtgacacactattatact
tgcagacaggagcctagcataactgtcctctgaatggcaccacccaacag
ctgactgagacagatgctgagacccaaagccaaacattagatggagcttg
gggagtcttgtggaagagttgggggaggattgagggacctgagaggacag
ggactccacaggaaagccaacagagtcaactaacctggaacccttgggag
ctccagagatgaaccatcaatcaaaggagtggcatggtctagacctagcc
ccagcaacaccagacatatgcagcagatgtgcaggtttgtcttcatgcag
ttcccgatacctgaagtatgggatggctcttgcattatgctgcctgtgaa
tcctttacctataggctgcttggctgactcagaagaaacgatgacctaga
ttctacagctaccgtgattgctgcggatagtgtccgtgatagctcg

gaattcattttgtcggaaatagaaaaaaaaaagccctgctgttgttatag
aaagttaagaggtgtatcaggtcatgtatgttgctatttaaggtactgtt
acttcccctggggctgttgagctgatcagaactgtgtgacaaatacatcg
tagtgtaatattccgatctcagtcacagtggtagttgctgttaagtaaga
gtttaaaaaaatctaagttgtattaataaaatggtccaacttcaaggtat
gatctcatattattgagcattctgtctttagcatattgagagtataatcc
aaggccttgtgaagtaggcctgagaaatgggaaaataatctgtgaggaac
agagatgctgctgggactgaatctgtgtgcaatgggttaacgcagattga
taattaaattaaatatgtgctttgtgtctctgcaatgatgatttaaattg
ttgctcataactgcagaatgttaattgtcatgcatgttagaagagacggg
ttttctttttagcgtttgttactaggaaaactgggggtaatggtctccat
tattatgtataaaatgtatgtgatttgtaaatctcatgtaaattaatatt
tctttctcacctgaaatagcctgagctttggttttagaaataagaataat
tttctaaaatgtaaatgaagaaaatatccaataagaaattggaaaaaata
aaataaaaaattgaaaaacaaacaaacaaacaaaagaataattttctaaa
ttgtctctgtaaaattgattatagaaaaagctaccttaatagaaggagga
aaaataaaaattcaatgtttaggtatgaaaatgatgccatttcctgctac
actgtctagtataccccataaattctggttcttattttatttacatttta
acttagtgtatttatgtaatcttaggggtaaaataatagcgggaggttgt
aggtctttttcttgataggtcatccacagattcgaaagtcatgtctcatc
ttgcatttcactttgcattgatagataagccatctgagtatatctgtaaa
aacagtccgaatacgatgagagagcttcagcagacgcaagaagacacttc
aaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_83308387_83309487
seq2: B6Ng01-293D21.g_68_1171

seq1  GAATTCATTTTGTCGGAAATAGAAAAAAAAAAGCCCTGCTGTTGTTATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTGTCGGAAATAGAAAAAAAAAAGCCCTGCTGTTGTTATAG  50

seq1  AAAGTTAAGAGGTGTATCAGGTCATGTATGTTGCTATTTAAGGTACTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAAGAGGTGTATCAGGTCATGTATGTTGCTATTTAAGGTACTGTT  100

seq1  ACTTCCCCTGGGGCTGTTGAGCTGATCAGAACTGTGTGACAAATACATCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCCTGGGGCTGTTGAGCTGATCAGAACTGTGTGACAAATACATCG  150

seq1  TAGTGTAATATTCCGATCTCAGTCACAGTGGTAGTTGCTGTTAAGTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTAATATTCCGATCTCAGTCACAGTGGTAGTTGCTGTTAAGTAAGA  200

seq1  GTTTAAAAAAATCTAAGTTGTATTAATAAAATGGTCCAACTTCAAGGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAAAAATCTAAGTTGTATTAATAAAATGGTCCAACTTCAAGGTAT  250

seq1  GATCTCATATTATTGAGCATTCTGTCTTTAGCATATTGAGAGTATAATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCATATTATTGAGCATTCTGTCTTTAGCATATTGAGAGTATAATCC  300

seq1  AAGGCCTTGTGAAGTAGGCCTGAGAAATGGGAAAATAATCTGTGAGGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTTGTGAAGTAGGCCTGAGAAATGGGAAAATAATCTGTGAGGAAC  350

seq1  AGAGATGCTGCTGGGACTGAATCTGTGTGCAATGGGTTAACGCAGATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGCTGCTGGGACTGAATCTGTGTGCAATGGGTTAACGCAGATTGA  400

seq1  TAATTAAATTAAATATGTGCTTTGTGTCTCTGCAATGATGATTTAAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAATTAAATATGTGCTTTGTGTCTCTGCAATGATGATTTAAATTG  450

seq1  TTGCTCATAACTGCAGAATGTTAATTGTCATGCATGTTAGAAGAGACGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCATAACTGCAGAATGTTAATTGTCATGCATGTTAGAAGAGACGGG  500

seq1  TTTTCTTTTTAGCGTTTGTTACTAGGAAAACTGGGGGTAATGGTCTCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTAGCGTTTGTTACTAGGAAAACTGGGGGTAATGGTCTCCAT  550

seq1  TATTATGTATAAAATGTATGTGATTTGTAAATCTCATGTAAATTAATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGTATAAAATGTATGTGATTTGTAAATCTCATGTAAATTAATATT  600

seq1  TCTTTCTCACCTGAAATAGCCTGAGCTTTGGTTTTAGAAATAAGAATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCACCTGAAATAGCCTGAGCTTTGGTTTTAGAAATAAGAATAAT  650

seq1  TTTCTAAAATGTAAATGAAGAAAATATCCAATAAGAAATTGGAAAAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAAATGTAAATGAAGAAAATATCCAATAAGAAATTGGAAAAAATA  700

seq1  AAATAAAAAATTGAAAAACAAACAAACAAACAAAAGAATAATTTTCTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAAATTGAAAAACAAACAAACAAACAAAAGAATAATTTTCTAAA  750

seq1  TTGTCTCTGTAAAATTGATTATAGAAAAAGCTACCTTAATAGAAGGAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTGTAAAATTGATTATAGAAAAAGCTACCTTAATAGAAGGAGGA  800

seq1  AAAATAAAAATTCAATGTTTAGGTATGAAAATGATGCCATTTCCTGCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAATTCAATGTTTAGGTATGAAAATGATGCCATTTCCTGCTAC  850

seq1  ACTGTCTAGTATACCCCATAAATTCTGGTTCTTATTTTATTTACATTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTAGTATACCCCATAAATTCTGGTTCTTATTTTATTTACATTTTA  900

seq1  ACTTAGTGTATTTATGTAATCTTAGGGGTAAAAT-ATAGC-GGAGGTTGT  948
      |||||||||||||||||||||||||||||||||| ||||| |||||||||
seq2  ACTTAGTGTATTTATGTAATCTTAGGGGTAAAATAATAGCGGGAGGTTGT  950

seq1  AGGTC-TTTTCTTGATAGGTCATCCACAGATTCG-AAGTCATGTCTCAAT  996
      ||||| |||||||||||||||||||||||||||| |||||||||||||  
seq2  AGGTCTTTTTCTTGATAGGTCATCCACAGATTCGAAAGTCATGTCTCATC  1000

seq1  CTGCATTTCAC-TTGCATTGATAGATAAGCCATCTGGAGTATATCTGTAA  1045
       |||||||||| ||||||||||||||||||||||| ||||||||||||||
seq2  TTGCATTTCACTTTGCATTGATAGATAAGCCATCT-GAGTATATCTGTAA  1049

seq1  AAACAAGTCCG-ATACGATGAGAGAGCTTCAGCAGACGCAGGAAGACACC  1094
      |||| |||||| |||||||||||||||||||||||||||| ||||||| |
seq2  AAAC-AGTCCGAATACGATGAGAGAGCTTCAGCAGACGCAAGAAGACA-C  1097

seq1  TTCAACA  1101
      |||||||
seq2  TTCAACA  1104


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