BAC Information

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BAC

Clone NameB6Ng01-293N09
Chromosome4 (Build37)
Map Location 128,513,416 - 128,657,539
singlet/doubletdoublet
Overlap geneLOC667354, Trim62, Adc
Upstream geneLOC635169, 4930465A12Rik, Hmgb4, 4930546G22Rik, Zscan20, Tlr12, Phc2, A3galt2, BC039093
Downstream geneAk2, Ibrdc3, Tmem54, Hpca, Fndc5, S100pbp, Yars, C77080, Sync, Rbbp4, Zbtb8os, 2410081M15Rik, LOC100039588, Zbtb8, Bsdc1, Tssk3, 1700125D06Rik, Marcksl1, Hdac1, Lck, BC030183, Eif3s2, 2510006D16Rik, LOC667452, Iqcc, Ccdc28b, Txlna, Kpna6, Tmem39b, Khdrbs1, LOC100040532, Ptp4a2, LOC622469, LOC622480, 1700003M07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293N09.bB6Ng01-293N09.g
ACCGA090118GA090119
length965121
definitionB6Ng01-293N09.b B6Ng01-293N09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,656,991 - 128,657,539)(128,513,416 - 128,513,536)
sequence
gaattcacttgaagctggtgaacaggggagcttagaccttgcgattaatg
acgtgtccgctcgttcatttcatgtattcaattgtttgatggctacttat
cgtattggcatagtttttgatacagggtctcattgtatagcccaggttag
cctaggctaactcactaagcaagtctcaaactcacaaccctcctccagcc
ttctgggtgctgggatgacagaagtgcaccatggcttcccgagcaagcag
gttcttttctttcttaaaagatatttaaaaggtttatgtctatttatgtg
tatgcgtgtatgccacatgagtgaagtgccctcagaagctagcagggaat
ccctcagggtttacaggtgatcctgagctaccctgtgtgggtgctgggac
ctgaaccacgccctctggaagaacagcaaatgctcttgacccctgaacca
ccactccagaaccttttgttattattactttaaaatttttatttaggttt
atttatctgcgtgtgtgagtttgtgtgtgtacatgcatgtacctagcatg
catgtgaaggacaacatgcatgttggttctgtccttcggcctgtaggctc
tgggatcaagcccaggccatcagacttggaggcgggtgcctttactggct
cagttatcctattcgcagtcaaatacttctactccttccttccctttttt
ctgagacagggttttttagaacagggtttggctgtctcttctaagactca
ctctgtagaccaggctggcctcaaactaattgagatccatctgtcctctg
cctccttagcactgggatcaaaggtatgtgccacaattgcctgggctcag
ttattttcttgaaaatatttttgctacagccaggtgggtgggtggacacc
ctttatcccagcactttgggaggcagaggcagaggcagaggcaggcggat
ctctgtgagtcagag
tggaattattgaggggcctgtgaggcaaagcctgtccttagtgtttagtc
tgccgctgtcacagccacagaagacagtaagtcttacgatgggccatgtg
ctggggtgggggtgggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_128656991_128657539
seq2: B6Ng01-293N09.b_48_596 (reverse)

seq1  ATGCTAGGTACATGCATGTACACACACAAACTCACACACGCAGATAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGGTACATGCATGTACACACACAAACTCACACACGCAGATAAATA  50

seq1  AACCTAAATAAAAATTTTAAAGTAATAATAACAAAAGGTTCTGGAGTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAAATAAAAATTTTAAAGTAATAATAACAAAAGGTTCTGGAGTGGT  100

seq1  GGTTCAGGGGTCAAGAGCATTTGCTGTTCTTCCAGAGGGCGTGGTTCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGGGGTCAAGAGCATTTGCTGTTCTTCCAGAGGGCGTGGTTCAGG  150

seq1  TCCCAGCACCCACACAGGGTAGCTCAGGATCACCTGTAAACCCTGAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCACCCACACAGGGTAGCTCAGGATCACCTGTAAACCCTGAGGGA  200

seq1  TTCCCTGCTAGCTTCTGAGGGCACTTCACTCATGTGGCATACACGCATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGCTAGCTTCTGAGGGCACTTCACTCATGTGGCATACACGCATAC  250

seq1  ACATAAATAGACATAAACCTTTTAAATATCTTTTAAGAAAGAAAAGAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATAGACATAAACCTTTTAAATATCTTTTAAGAAAGAAAAGAACC  300

seq1  TGCTTGCTCGGGAAGCCATGGTGCACTTCTGTCATCCCAGCACCCAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCTCGGGAAGCCATGGTGCACTTCTGTCATCCCAGCACCCAGAAG  350

seq1  GCTGGAGGAGGGTTGTGAGTTTGAGACTTGCTTAGTGAGTTAGCCTAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGGAGGGTTGTGAGTTTGAGACTTGCTTAGTGAGTTAGCCTAGGC  400

seq1  TAACCTGGGCTATACAATGAGACCCTGTATCAAAAACTATGCCAATACGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGGGCTATACAATGAGACCCTGTATCAAAAACTATGCCAATACGA  450

seq1  TAAGTAGCCATCAAACAATTGAATACATGAAATGAACGAGCGGACACGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGCCATCAAACAATTGAATACATGAAATGAACGAGCGGACACGTC  500

seq1  ATTAATCGCAAGGTCTAAGCTCCCCTGTTCACCAGCTTCAAGTGAATTC  549
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCGCAAGGTCTAAGCTCCCCTGTTCACCAGCTTCAAGTGAATTC  549

seq1: chr4_128513416_128513536
seq2: B6Ng01-293N09.g_72_192

seq1  TGGAATTATTGAGGGGCCTGTGAGGCAAAGCCTGTCCTTAGTGTTTAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTATTGAGGGGCCTGTGAGGCAAAGCCTGTCCTTAGTGTTTAGTC  50

seq1  TGCCGCTGTCACAGCCACAGAAGACAGTAAGTCTTACGATGGGCCATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGCTGTCACAGCCACAGAAGACAGTAAGTCTTACGATGGGCCATGTG  100

seq1  CTGGGGTGGGGGTGGGAGGGA  121
      |||||||||||||||||||||
seq2  CTGGGGTGGGGGTGGGAGGGA  121