BAC Information

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BAC

Clone NameB6Ng01-295M06
Chromosome4 (Build37)
Map Location 71,823,314 - 71,824,452
singlet/doubletsinglet
Overlap geneTle1
Upstream geneLOC100039979, LOC667638, EG667649
Downstream geneAldoa-ps2, EG384113, LOC667713, LOC100039698
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295M06.bB6Ng01-295M06.g
ACCGA091550GA091551
length1,2101,133
definitionB6Ng01-295M06.b B6Ng01-295M06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaaacttttaaattttgctgtttgaatgacacatttcttaaag
taacttatcaatgtaaattaacatcaatacatccatttaaccttgtaatg
tatcccaaaattctactacagagatacttgttcatccatactaattactg
ctttattcataatagccagaaattggaaacagtctggaggtccataaact
gatgaatggataagaaaatgtagaacatttacacaatgggatattattta
gttattaagctgaaggaaataatgaaactttcagataaatgaatgaagct
aaaaagaattattttaagtgaattaacacaggaagacctaaaaaaagaca
aatattgtacattttgtattatatgtacatattggatttttagctgtaga
tatctatgttttgaagcaaataaccatagaagttaagtagctaataaggg
attatggacaaagaggagatcctccaaggaatgttaatagaaagcagtgt
tatagagagataaagagtaaactagaataggagatttaaatgggaagagt
gatgagagagtgagataaaggagagattataaacactaaatgacttttga
atacacacatgaatagaagcttcctgtggtgtatgtatgtgtaaaaggca
tttggatagagccatcagggctagagagatggctcagtggttaagggcac
ttagtgtctgcccttccagagatcttgagttcaattcccagcaaccacat
agtggctcagaaccatttataatgggatccgatgccctcttctggtgtgt
ctgaagatagagccatcatataacagaaaagataatgacccaaccagaca
ccctgtaagaccatgcaaaactcgcagtgccaagaagaatgtacactttg
cttagtcattgggcaaagaggatccatagtatcccctccccaccacccaa
catcataggttagtgccaagccttgctctccacaatctgaggcaaatacc
ttttggctgaagactcaacttatctatgttactcatcatgaataattcaa
ctgatgccaactatttttcacctcctatgacctagtattcagttcctgta
aaggtaattttgcaatgccaaggagaaaaggccatcatcaatcgtcacct
cagccaaccaaatcctggtgtgacctctaacgccagaagaagggtttgct
ctcatgcatg

gaattctcaaaaaatgggtcatatcaaggaaatatcaaaatgcatccatc
actggtcatcagcggtcattcagaaacactgagatgcccttcaggaagat
aatatcaaaggaaaccagacaagttttagtaaaaggtatagcaaaaagtg
aatctacagatagtgtttctgggaacctaaactactaacattattataga
aaacactagacagcttctaaaaaataaaaataaaaaattcaaaacaagtg
atacagcaatcctattgtagatatatacctgaaggaaataaaattgtctc
aaacagacatctgcactcacatgctcactgcagtatcatcccaacagcca
atgtatgtgctttgctgctatcactgttaatccaggcccttgagtagctg
ggggtgggggtggcatcctccaactcattatgtagctaagataaccctga
cttttaaaatttgagatattttccactatacacaatttgtggaagtattg
gggatcgaattcagagcttcatgtgtcatagacaagcactcttaattaat
cgacatcctcaggcccaacctgggtctggattctaagagaagaacagagt
agaatgagaagtcgttacccggagttgggaaaataggagatgatgaccaa
atgattcaaagtttcaatttatatagggtaacttctggaaatctaagata
aggcatggtggccatgggctgtgttgtgtgtataccatgttgtgtgtttg
acattgctaagagatcttaagtgcctacacagatattagactatgggatg
attaacatgttcatctgcttgattgtgataatataatcaaaacactaagt
tatacttcttaaatagaattttctatttgtctatagtgctccaataaagc
tgaaaaagcaacaagaaagtgacagaaacccagaaagggattagtaagaa
acagccacacctctcatacttgccatctttactctttctgaattttgctg
aggcaactcatttgtctagcactacactattttttcccacctcactggct
gacttatgtctgatctctaagtactaaggtctgaacaaggaaccacactt
aaaaatctatgttacgtagatcatttccaaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_71823314_71824452
seq2: B6Ng01-295M06.g_66_1198

seq1  GAATTCTCAAAAAATGGGTCATATCAAGGAAATATCAAAATGCATCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAAAATGGGTCATATCAAGGAAATATCAAAATGCATCCATC  50

seq1  ACTGGTCATCAGCGGTCATTCAGAAACACTGAGATGCCCTTCAGGAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCATCAGCGGTCATTCAGAAACACTGAGATGCCCTTCAGGAAGAT  100

seq1  AATATCAAAGGAAACCAGACAAGTTTTAGTAAAAGGTATAGCAAAAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAAAGGAAACCAGACAAGTTTTAGTAAAAGGTATAGCAAAAAGTG  150

seq1  AATCTACAGATAGTGTTTCTGGGAACCTAAACTACTAACATTATTATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACAGATAGTGTTTCTGGGAACCTAAACTACTAACATTATTATAGA  200

seq1  AAACACTAGACAGCTTCTAAAAAATAAAAATAAAAAATTCAAAACAAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTAGACAGCTTCTAAAAAATAAAAATAAAAAATTCAAAACAAGTG  250

seq1  ATACAGCAATCCTATTGTAGATATATACCTGAAGGAAATAAAATTGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCAATCCTATTGTAGATATATACCTGAAGGAAATAAAATTGTCTC  300

seq1  AAACAGACATCTGCACTCACATGCTCACTGCAGTATCATCCCAACAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGACATCTGCACTCACATGCTCACTGCAGTATCATCCCAACAGCCA  350

seq1  ATGTATGTGCTTTGCTGCTATCACTGTTAATCCAGGCCCTTGAGTAGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTGCTTTGCTGCTATCACTGTTAATCCAGGCCCTTGAGTAGCTG  400

seq1  GGGGTGGGGGTGGCATCCTCCAACTCATTATGTAGCTAAGATAACCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGGTGGCATCCTCCAACTCATTATGTAGCTAAGATAACCCTGA  450

seq1  CTTTTAAAATTTGAGATATTTTCCACTATACACAATTTGTGGAAGTATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAAATTTGAGATATTTTCCACTATACACAATTTGTGGAAGTATTG  500

seq1  GGGATCGAATTCAGAGCTTCATGTGTCATAGACAAGCACTCTTAATTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCGAATTCAGAGCTTCATGTGTCATAGACAAGCACTCTTAATTAAT  550

seq1  CGACATCCTCAGGCCCAACCTGGGTCTGGATTCTAAGAGAAGAACAGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACATCCTCAGGCCCAACCTGGGTCTGGATTCTAAGAGAAGAACAGAGT  600

seq1  AGAATGAGAAGTCGTTACCCGGAGTTGGGAAAATAGGAGATGATGACCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAGAAGTCGTTACCCGGAGTTGGGAAAATAGGAGATGATGACCAA  650

seq1  ATGATTCAAAGTTTCAATTTATATAGGGTAACTTCTGGAAATCTAAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCAAAGTTTCAATTTATATAGGGTAACTTCTGGAAATCTAAGATA  700

seq1  AGGCATGGTGGCCATGGGCTGTGTTGTGTGTATACCATGTTGTGTGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGGTGGCCATGGGCTGTGTTGTGTGTATACCATGTTGTGTGTTTG  750

seq1  ACATTGCTAAGAGATCTTAAGTGCCTACACAGATATTAGACTATGGGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCTAAGAGATCTTAAGTGCCTACACAGATATTAGACTATGGGATG  800

seq1  ATTAACATGTTCATCTGCTTGATTGTGATAATATAATCAAAACACTAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATGTTCATCTGCTTGATTGTGATAATATAATCAAAACACTAAGT  850

seq1  TATACTTCTTAAATAGAA-TTTCTATTTGTCTATAGTGCTCCAATAAAGC  899
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TATACTTCTTAAATAGAATTTTCTATTTGTCTATAGTGCTCCAATAAAGC  900

seq1  TGAAAAAGCAACAAGAAAGTGACAGAAACCCAGAAAGGGATTAGTAAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAGCAACAAGAAAGTGACAGAAACCCAGAAAGGGATTAGTAAGAA  950

seq1  ACAGCCACACCTCTCAATACTTGCCATCTTTACTCTTTCTGAATTTTGCT  999
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACAGCCACACCTCTC-ATACTTGCCATCTTTACTCTTTCTGAATTTTGCT  999

seq1  GAGGCCAACTCATTTGTCTAGCCACTACACTA-TCTATCCCACCTTCACT  1048
      |||| |||||||||||||||| |||||||||| | | ||||||| |||||
seq2  GAGG-CAACTCATTTGTCTAG-CACTACACTATTTTTTCCCACC-TCACT  1046

seq1  GCCTGACTTATGTCTGATCTCT-AGTACTTAAAGGGTCTGAACAAG--AA  1095
      | |||||||||||||||||||| ||||||   | ||||||||||||  | 
seq2  GGCTGACTTATGTCTGATCTCTAAGTACT---AAGGTCTGAACAAGGAAC  1093

seq1  CACACTTTAAAAAAACCATGTTACGTAGATCCATTTCAAAAACC  1139
      |||||||  ||||| | ||||||||||||| |||||| ||| | 
seq2  CACACTT--AAAAATCTATGTTACGTAGAT-CATTTCCAAACC-  1133


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