BAC Information

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BAC

Clone NameB6Ng01-296E10
Chromosome4 (Build37)
Map Location 21,195,758 - 21,196,892
singlet/doubletsinglet
Overlap genenone
Upstream geneE130310K16Rik
Downstream genePrdm13, Ccnc, 2610029I01Rik, Usp45, 4930528A17Rik, 5730406M06Rik, Coq3, 6230409E13Rik, LOC100040379
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296E10.bB6Ng01-296E10.g
ACCGA091926GA091927
length1,1191,167
definitionB6Ng01-296E10.b B6Ng01-296E10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctggcttaaacccgttgcgtgcatccaaggatacacatgtgtgg
gcttgtgagaatataaaccaaatgtaaccctcttccaggcctggacaagg
agccaggcaagctccccacatgactgccactcctcaatgttgaactacta
cttctttccagccttttcctttgcccaggagatctctcatcactctgtaa
tgttcactatttctcatgtttcacctcaatcaaagctgcagctatctctg
cagtcaaacaacatagcttttcaccataaagtaacagcacattcccttgc
ctctcacttccttgtttataactaactgtaccaatttagtttaatatcct
caaaactcctttacaatgactgagaaaagcaacatattgtctatgagatc
aaagacaagggtgaggaacaaagagagaaaagtagaatacagaatgcaaa
aaagaagaaaaagaatggaagaggtggagaaaaactacatatttttagag
ctaccacaaaacacatagccattgtgtaaagaccacaccacagcagtgtc
taaacaatttaaaattcatccgccagctctatatctcattacatatatct
ctacttgtggggatttcttcttttcccttctgaatctagtaaacggaagt
gagagggatttttttgtctttgtgcttccctctgtattttcctaagtctg
tttctcaatggcgctatggccatatgaaagattgtggccatttttttaga
gcttcaagccttctaactttgtgttgatgtacaggaatgtggtgctatag
cttgttctagtgttagtctaattggaaatttcataactgtgtaaccgtag
caaagggagatgactgcttactatttgccagcctgcttctaagaacaatc
tcattttgtttcattgaggtcctctgtcagacttctaagtccatattgtt
atgggtaagaaaacagaggttcatagagtttgagtaattttcagaagcat
cattaggattaaaatctttccttcagacatcatccacagcttttgagcag
tgtgcttttgagcacacttttaattttgtttgtttgtttgtttttcagat
cacataccctagctagcct

gaattcctgatctttccaaatcttttatcatgagtgggtgttggatcttg
tcaaatgccttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatgggttttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattggt
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttcttggtttaggtatcagagtaatagtggcttcataaaatgagttgg
gtagagtaccttctacttctatcttgttaaatagtttgtgcagaactgga
attagatcttctttgaaggtctgatagaactctgcactaaacccatctgg
tcctgggctttttttggttgggagactattaataactgcttctatttctt
taggtgatatgggactgtttagaaggtcaacttgatcctgattcaacttt
ggtacctggtatctgtccagaaatttgtccatttcgtccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaggatctgttgttatgtctcccttttcagttctgattttgttaatt
aggattttgtccctgtgccctctagtgagtctagctatgggtttatctat
cttgttgattttctcaaagaaccaactcctcgtttggttaattctttgaa
tagttcttcatgtttccacttggttgatttcacccctgagtttgattatt
tcctgccgtctactcctcttgggtgaatttgcttcctttttttttctaga
gcttttagatgtgttgtcaagctgctagtatgtgctgtcttcccgtttct
tcttggaggcactcagagctatgagtttccgtcttagaaatgctttcatt
gtgtcacaaagtttggtacgtgttgcttcatttcaataactctaaaaggt
ctttatttcttctatcttccttgaacaggtatcatggaagaggtgttttt
tcagttcccgtaatgtgcctccatattaggtggttatggagaatccagac
ttctagagcgcacgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_21195758_21196892
seq2: B6Ng01-296E10.b_47_1165

seq1  GAATTCCTGGCTTAAACCCGTTGCGTGCATCCAAGGATACACATGTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGCTTAAACCCGTTGCGTGCATCCAAGGATACACATGTGTGG  50

seq1  GCTTGTGAGAATATAAACCAAATGTAACCCTCTTCCAGGCCTGGACAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGAGAATATAAACCAAATGTAACCCTCTTCCAGGCCTGGACAAGG  100

seq1  AGCCAGGCAAGCTCCCCACATGACTGCCACTCCTCAATGTTGAACTACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGCAAGCTCCCCACATGACTGCCACTCCTCAATGTTGAACTACTA  150

seq1  CTTCTTTCCAGCCTTTTCCTTTGCCCAGGAGATCTCTCATCACTCTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTCCAGCCTTTTCCTTTGCCCAGGAGATCTCTCATCACTCTGTAA  200

seq1  TGTTCACTATTTCTCATGTTTCACCTCAATCAAAGCTGCAGCTATCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACTATTTCTCATGTTTCACCTCAATCAAAGCTGCAGCTATCTCTG  250

seq1  CAGTCAAACAACATAGCTTTTCACCATAAAGTAACAGCACATTCCCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAAACAACATAGCTTTTCACCATAAAGTAACAGCACATTCCCTTGC  300

seq1  CTCTCACTTCCTTGTTTATAACTAACTGTACCAATTTAGTTTAATATCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTTCCTTGTTTATAACTAACTGTACCAATTTAGTTTAATATCCT  350

seq1  CAAAACTCCTTTACAATGACTGAGAAAAGCAACATATTGTCTATGAGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTCCTTTACAATGACTGAGAAAAGCAACATATTGTCTATGAGATC  400

seq1  AAAGACAAGGGTGAGGAACAAAGAGAGAAAAGTAGAATACAGAATGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAAGGGTGAGGAACAAAGAGAGAAAAGTAGAATACAGAATGCAAA  450

seq1  AAAGAAGAAAAAGAATGGAAGAGGTGGAGAAAAACTACATATTTTTAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGAAAAAGAATGGAAGAGGTGGAGAAAAACTACATATTTTTAGAG  500

seq1  CTACCACAAAACACATAGCCATTGTGTAAAGACCACACCACAGCAGTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACAAAACACATAGCCATTGTGTAAAGACCACACCACAGCAGTGTC  550

seq1  TAAACAATTTAAAATTCATCCGCCAGCTCTATATCTCATTACATATATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAATTTAAAATTCATCCGCCAGCTCTATATCTCATTACATATATCT  600

seq1  CTACTTGTGGGGATTTCTTCTTTTCCCTTCTGAATCTAGTAAACGGAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGTGGGGATTTCTTCTTTTCCCTTCTGAATCTAGTAAACGGAAGT  650

seq1  GAGAGGGATTTTTTTGTCTTTGTGCTTCCCTCTGTATTTTCCTAAGTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGATTTTTTTGTCTTTGTGCTTCCCTCTGTATTTTCCTAAGTCTG  700

seq1  TTTCTCAATGGCGCTATGGCCATATGAAAGATTGTGGCCATTTTTTTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAATGGCGCTATGGCCATATGAAAGATTGTGGCCATTTTTTTAGA  750

seq1  GCTTCAAGCCTTCTAACTTTGTGTTGATGTACAGGAATGTGGTGCTATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAAGCCTTCTAACTTTGTGTTGATGTACAGGAATGTGGTGCTATAG  800

seq1  CTTGTTCTAGTGTTAGTCTAATTGGAAATTTCATAACTGTGTAACCGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTAGTGTTAGTCTAATTGGAAATTTCATAACTGTGTAACCGTAG  850

seq1  CAAAGGGAGATGACTGCTTACTATTTGCCAGCCTGCTTCTAAGAACAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGAGATGACTGCTTACTATTTGCCAGCCTGCTTCTAAGAACAATC  900

seq1  TCATTTTGTTTCATTGAGGTCCTCTGTCAGACTTCTAAGTCCATATTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGTTTCATTGAGGTCCTCTGTCAGACTTCTAAGTCCATATTGTT  950

seq1  ATGGGTAAGAAAACAGAGGTTCATAGAGTTTGAGTAAATTTTCAGAAGGC  1000
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  ATGGGTAAGAAAACAGAGGTTCATAGAGTTTGAGT-AATTTTCAGAA-GC  998

seq1  ATCATTAGGATTAAAATCTTTCCTTCAGAACATCAATCCACAGGCTTTTG  1050
      |||||||||||||||||||||||||||| ||||| ||||||| |||||||
seq2  ATCATTAGGATTAAAATCTTTCCTTCAG-ACATC-ATCCACA-GCTTTTG  1045

seq1  AGCAAGTGTGCTTTTGAGCACACTTTTATTTTTGTTTTTTGTTTTGTTTT  1100
      ||| |||||||||||||||||||||||| |||||||| ||  ||||    
seq2  AGC-AGTGTGCTTTTGAGCACACTTTTAATTTTGTTTGTTTGTTTG----  1090

seq1  GTTTTTTCAGAATTCCACATACCCTAGGCTAGCCT  1135
        |||||||||    ||||||||||| ||||||||
seq2  --TTTTTCAGA---TCACATACCCTA-GCTAGCCT  1119


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