BAC Information

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BAC

Clone NameB6Ng01-296P15
Chromosome4 (Build37)
Map Location 137,517,421 - 137,669,029
singlet/doubletdoublet
Overlap geneEce1, LOC100040558, Eif4g3
Upstream geneZbtb40, Wnt4, Cdc42, LOC665533, LOC242711, Ela3, 1700013G24Rik, Hspg2, Ldlrad2, Usp48, Rap1gap, Akp2
Downstream geneHp1bp3, Kif17, Ddost, Pink1, Cda, LOC625638, LOC625646, 0610009K11Rik, Camk2n1, LOC100040618, 4931403E03Rik, Ubxd3, Pla2g2c, Pla2g2f, Pla2g2d, Pla2g5, Pla2g2a, Pla2g2e, Otud3, Rnf186, Tmco4, Htr6, LOC665683, Nbl1, 2310028O11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296P15.bB6Ng01-296P15.g
ACCGA092451GA092452
length1,183988
definitionB6Ng01-296P15.b B6Ng01-296P15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,667,854 - 137,669,029)(137,517,421 - 137,518,405)
sequence
gaattcctttaacatataaagggctcttgcaaaaaactcaaatagtatcc
caatacaaatatgtaaagacaaataatgtatatgcacacagaaattacaa
gacaataaaaactcttcacttcagaaatctataagaactaagcatggtta
tttttttcttttgattatttttttctaatctgtcagataaaaaaattata
aacaaggggaatgctctgatactgctgagatagagagaatccaatatagt
ccaagggaaactctgtaaccctaaacaggcagaaacatcactccaaatgc
ttcacttagacacaaataggaaacaatttgaaacaatttgatggcctgtc
aattaaactgtttaacatacaaacaacggaatgcaggcagtcctaatgta
gactataactgtcccttgggaattatacctgtggcaaagcatgaatctga
tttctgtgagttaagaagatgctgtggcaaatggtttacataaacccaaa
ggcacagaacatatgcgaatgcatacatgcaaatgtatacatgcatatac
attcagcgagaagggtctgaaaagacctcagacctggggcctaacctcct
aaccttctctttcctgtcacttccagagattgattacctgtacttgtaca
gacataaagctaggttaattttcatttgcacttttttgtaaagacaggtc
tcatgtatcctaggctgccttgaactcaatagttagctgaaaatgaccac
aacttctgttccccctgctcctgcaagctctgagatacaggcatgtgcta
ctttgttcaaggaagttattctaactttctagacctaacatgaaggacag
atcgaatgctaacatgaaggacagatgctaattcctcataacaatgtgca
tcagtttctgggatggttacagtctccactctcactgcctggcattctta
aaacaggtggtagggaacaggaactgtgcgcatgccaccaccacagctga
ttccagtgtccagagggcgtgcaatttactagcttcaatcaacaagctag
ctagcaacagctgctgtcacctcgaatcttccagttactaccgtgctgcc
actggtggaagagaacaaagggccagcagcacctcgaagagactgcttgc
ctacccagtctcattctcatccttccatctcag
gaattcatccccttttgaatgggaacacagaaggaagccaactcccagac
atgcccctcttcccctaaacctcctccacggtggcggccctcatccgtgc
ggtgtcatgtctaaactctgctgttctgtcctcgcaggcgtaccagaact
gggtaaagaagaacggagctgagcagacgctgcccaccctgggtctcacc
agcaaccagctcttcttcctaggatttgcacaggtgagctcaccgggggg
aaaaggccggtgtggcccatcatgggggtgtacaggaacttcagagccag
aggcactttcctctcacatggcaccttcctaagtcatccgactgcctttg
ggacatcccatctctctattagtggctctcaacctgtgggtcacaacttg
tggtgtgtgggagggtcaaatgaccctttcacagggttcacccaagacta
tcaggaaacacagttacttacatcatgattcatgacagtagcaaagttag
agttatgaagtagcaatgaaaacaattttatggtagggggtcaccacacc
atgaggtgttaagggtctcctcattaggaagggtgagaactactgcccta
tactgaggtgagatgcaaggaaggaaggaaggactaagcttggaatgaag
gatgctggagagagatagctcagtggttactgcactgccgcacttacaga
ggacctggtttggttcccagcaccccaatagcggctcgcagccatccata
actctggtttccgggaggccagacacactctcctggcctccaaggacact
gctttgtgccatcatgcctggttctagaagtttctgaaacttgggttgtc
cttgaatgtgcctccagccacaagccttctgttggtgcctagaaatatca
ggcagttaaagcagggtgtccctcccagcaaaaggagagttctggatcaa
gccgccaaggtgtctgagttaccgttggcagactaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_137667854_137669029
seq2: B6Ng01-296P15.b_48_1230 (reverse)

seq1  CTGAGATGGAGGGAGGAGGAGGGAGACTTGGGTA-GCAAGCAGTTCTC-T  48
      |||||||||| ||| || ||  ||||| |||||| |||||||| |||| |
seq2  CTGAGATGGAAGGATGA-GAATGAGAC-TGGGTAGGCAAGCAG-TCTCTT  47

seq1  CGA-GTGCTGCT-GCCCTT--GTCTCT--CACCAGTGGCAGCACGGGTAG  92
      ||| |||||||| ||||||   |||||  ||||||||||||||| |||||
seq2  CGAGGTGCTGCTGGCCCTTTGTTCTCTTCCACCAGTGGCAGCAC-GGTAG  96

seq1  T-ACTGGGAGA-TCGAGGTGACAGCAGCTGTTGCTAGCTAGCTGTTGGAT  140
      | ||||| ||| |||||||||||||||||||||||||||||||  | |||
seq2  TAACTGGAAGATTCGAGGTGACAGCAGCTGTTGCTAGCTAGCTTGTTGAT  146

seq1  GGAGCCTAGTAAATTGCACGCCCTCTGGACACTGGAATCAGCTGTGGTGG  190
       ||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTAGTAAATTGCACGCCCTCTGGACACTGGAATCAGCTGTGGTGG  196

seq1  TGGCATGCGCACAGTTCCTGTTCCCTACCACCTGTTTTAAGAATGCCAGG  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGCGCACAGTTCCTGTTCCCTACCACCTGTTTTAAGAATGCCAGG  246

seq1  CAGTGAGAGTGGAGACTGTAACCAT-CCAGAAACTGATGCACATTGTTAT  289
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAGTGAGAGTGGAGACTGTAACCATCCCAGAAACTGATGCACATTGTTAT  296

seq1  GAGGAATTAGCATCTGTCCTTCATGTTAGCATTCGATCTGTCCTTCATGT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATTAGCATCTGTCCTTCATGTTAGCATTCGATCTGTCCTTCATGT  346

seq1  TAGGTCTAGAAAGTTAGAATAACTTCCTTGAACAAAGTAGCACATGCCTG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTAGAAAGTTAGAATAACTTCCTTGAACAAAGTAGCACATGCCTG  396

seq1  TATCTCAGAGCTTGCAGGAGCAGGGGGAACAGAAGTTGTGGTCATTTTCA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAGAGCTTGCAGGAGCAGGGGGAACAGAAGTTGTGGTCATTTTCA  446

seq1  GCTAACTATTGAGTTCAAGGCAGCCTAGGATACATGAGACCTGTCTTTAC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACTATTGAGTTCAAGGCAGCCTAGGATACATGAGACCTGTCTTTAC  496

seq1  AAAAAAGTGCAAATGAAAATTAACCTAGCTTTATGTCTGTACAAGTACAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTGCAAATGAAAATTAACCTAGCTTTATGTCTGTACAAGTACAG  546

seq1  GTAATCAATCTCTGGAAGTGACAGGAAAGAGAAGGTTAGGAGGTTAGGCC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCAATCTCTGGAAGTGACAGGAAAGAGAAGGTTAGGAGGTTAGGCC  596

seq1  CCAGGTCTGAGGTCTTTTCAGACCCTTCTCGCTGAATGTATATGCATGTA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCTGAGGTCTTTTCAGACCCTTCTCGCTGAATGTATATGCATGTA  646

seq1  TACATTTGCATGTATGCATTCGCATATGTTCTGTGCCTTTGGGTTTATGT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTGCATGTATGCATTCGCATATGTTCTGTGCCTTTGGGTTTATGT  696

seq1  AAACCATTTGCCACAGCATCTTCTTAACTCACAGAAATCAGATTCATGCT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATTTGCCACAGCATCTTCTTAACTCACAGAAATCAGATTCATGCT  746

seq1  TTGCCACAGGTATAATTCCCAAGGGACAGTTATAGTCTACATTAGGACTG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACAGGTATAATTCCCAAGGGACAGTTATAGTCTACATTAGGACTG  796

seq1  CCTGCATTCCGTTGTTTGTATGTTAAACAGTTTAATTGACAGGCCATCAA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATTCCGTTGTTTGTATGTTAAACAGTTTAATTGACAGGCCATCAA  846

seq1  ATTGTTTCAAATTGTTTCCTATTTGTGTCTAAGTGAAGCATTTGGAGTGA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTCAAATTGTTTCCTATTTGTGTCTAAGTGAAGCATTTGGAGTGA  896

seq1  TGTTTCTGCCTGTTTAGGGTTACAGAGTTTCCCTTGGACTATATTGGATT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGCCTGTTTAGGGTTACAGAGTTTCCCTTGGACTATATTGGATT  946

seq1  CTCTCTATCTCAGCAGTATCAGAGCATTCCCCTTGTTTATAATTTTTTTA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTATCTCAGCAGTATCAGAGCATTCCCCTTGTTTATAATTTTTTTA  996

seq1  TCTGACAGATTAGAAAAAAATAATCAAAAGAAAAAAATAACCATGCTTAG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAGATTAGAAAAAAATAATCAAAAGAAAAAAATAACCATGCTTAG  1046

seq1  TTCTTATAGATTTCTGAAGTGAAGAGTTTTTATTGTCTTGTAATTTCTGT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATAGATTTCTGAAGTGAAGAGTTTTTATTGTCTTGTAATTTCTGT  1096

seq1  GTGCATATACATTATTTGTCTTTACATATTTGTATTGGGATACTATTTGA  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATATACATTATTTGTCTTTACATATTTGTATTGGGATACTATTTGA  1146

seq1  GTTTTTTGCAAGAGCCCTTTATATGTTAAAGGAATTC  1176
      |||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGCAAGAGCCCTTTATATGTTAAAGGAATTC  1183

seq1: chr4_137517421_137518405
seq2: B6Ng01-296P15.g_72_1059

seq1  GAATTCATCCCCTTTTGAATGGGAACACAGAAGGAAGCCAACTCCCAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCCCTTTTGAATGGGAACACAGAAGGAAGCCAACTCCCAGAC  50

seq1  ATGCCCCTCTTCCCCTAAACCTCCTCCACGGTGGCGGCCCTCATCCGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCTCTTCCCCTAAACCTCCTCCACGGTGGCGGCCCTCATCCGTGC  100

seq1  GGTGTCATGTCTAAACTCTGCTGTTCTGTCCTCGCAGGCGTACCAGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCATGTCTAAACTCTGCTGTTCTGTCCTCGCAGGCGTACCAGAACT  150

seq1  GGGTAAAGAAGAACGGAGCTGAGCAGACGCTGCCCACCCTGGGTCTCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAGAAGAACGGAGCTGAGCAGACGCTGCCCACCCTGGGTCTCACC  200

seq1  AGCAACCAGCTCTTCTTCCTAGGATTTGCACAGGTGAGCTCACCGGGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCAGCTCTTCTTCCTAGGATTTGCACAGGTGAGCTCACCGGGGGG  250

seq1  AAAAGGCCGGTGTGGCCCATCATGGGGGTGTACAGGAACTTCAGAGCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCCGGTGTGGCCCATCATGGGGGTGTACAGGAACTTCAGAGCCAG  300

seq1  AGGCACTTTCCTCTCACATGGCACCTTCCTAAGTCATCCGACTGCCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTTTCCTCTCACATGGCACCTTCCTAAGTCATCCGACTGCCTTTG  350

seq1  GGACATCCCATCTCTCTATTAGTGGCTCTCAACCTGTGGGTCACAACTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCCCATCTCTCTATTAGTGGCTCTCAACCTGTGGGTCACAACTTG  400

seq1  TGGTGTGTGGGAGGGTCAAATGACCCTTTCACAGGGTTCACCCAAGACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGTGGGAGGGTCAAATGACCCTTTCACAGGGTTCACCCAAGACTA  450

seq1  TCAGGAAACACAGTTACTTACATCATGATTCATGACAGTAGCAAAGTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAACACAGTTACTTACATCATGATTCATGACAGTAGCAAAGTTAG  500

seq1  AGTTATGAAGTAGCAATGAAAACAATTTTATGGTAGGGGGTCACCACACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGAAGTAGCAATGAAAACAATTTTATGGTAGGGGGTCACCACACC  550

seq1  ATGAGGTGTTAAGGGTCTCCTCATTAGGAAGGGTGAGAACTACTGCCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTGTTAAGGGTCTCCTCATTAGGAAGGGTGAGAACTACTGCCCTA  600

seq1  TACTGAGGTGAGATGCAAGGAAGGAAGGAAGGACTAAGCTTGGAATGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGGTGAGATGCAAGGAAGGAAGGAAGGACTAAGCTTGGAATGAAG  650

seq1  GATGCTGGAGAGAGATAGCTCAGTGGTTACTGCACTGCCGCACTTACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGAGAGAGATAGCTCAGTGGTTACTGCACTGCCGCACTTACAGA  700

seq1  GGACCTGGTTTGGTTCCCAGCACCCCAATAGCGGCTCGCAGCCATCCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGGTTTGGTTCCCAGCACCCCAATAGCGGCTCGCAGCCATCCATA  750

seq1  ACTCTGGTTTCCGGGAGGCCAGACACACTCTCCTGGCCTCCAAGGACACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGTTTCCGGGAGGCCAGACACACTCTCCTGGCCTCCAAGGACACT  800

seq1  GC-TTGTGCCATCATGCCTGGTTCTAGAAGTTTCTGAAACTT-GGTTGTC  848
      || ||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GCTTTGTGCCATCATGCCTGGTTCTAGAAGTTTCTGAAACTTGGGTTGTC  850

seq1  CTTGAATGTGCCTCCAGCCACAAGCCTTCTGTTGGTGCCTAGAATTATCA  898
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTGAATGTGCCTCCAGCCACAAGCCTTCTGTTGGTGCCTAGAAATATCA  900

seq1  GGCAGTT-AAGCAGGGTGTCCTTCCCAGC-AAAGGAGAGTTCTGGATCAA  946
      ||||||| ||||||||||||| ||||||| |||||||||||||||||| |
seq2  GGCAGTTAAAGCAGGGTGTCCCTCCCAGCAAAAGGAGAGTTCTGGATC-A  949

seq1  AGCCGCCAAGGTGTCTGAGTAACGTTTGGCAGACTAATG  985
      |||||||||||||||||||| ||  ||||||||||||||
seq2  AGCCGCCAAGGTGTCTGAGTTACCGTTGGCAGACTAATG  988