BAC Information

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BAC

Clone NameB6Ng01-296P19
Chromosome4 (Build37)
Map Location 68,701,503 - 68,816,229
singlet/doubletdoublet
Overlap genenone
Upstream geneTcp1-ps1, Dbc1
Downstream geneLOC622491, LOC433716, LOC100039888, LOC242497, LOC671064
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296P19.bB6Ng01-296P19.g
ACCGA092459GA092460
length1,1691,158
definitionB6Ng01-296P19.b B6Ng01-296P19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,815,038 - 68,816,229)(68,701,503 - 68,702,650)
sequence
gaattcagttacacgtgttcattatcaggaatgattttagtcctgtttgg
ttggcatatttattttataagctatagtagatgtggactatcacatggta
ttttgttatattccttgatttgtggactcatagttatcatacaagaacat
ctacagttttgtactttagaaaatatccaaatttgaaatcccaaaagcta
agtgatgagaagattccctagaatccaattacagagctccatagtcttta
gcatgaagacactgtttggtacacttggtcctcttcagtatattgtaatg
acagtccagaattttctataaacatgatcgcaatgatgcagtggctaatt
tgagatggttgagtactgggcctttggtggaaagcgatcccaaaagaggg
aacatggttaaggagagcacattatcagaaaaaaaaatgctcccaaagct
gaaagtaaatacaatccaatctaataatacagacacaataaaaacaaaca
caatgaaatcacacaagtggttgaatctcctttcttttccaatgttactt
atttgactcactgtagaagcaagcaaagattaaaaaaaaaaaaaaaactt
gtaatacctccttggattagagcagttgcccaataaatgtcaaggaaatc
aatttatcagaccatattttgttctatgccactctctgtccctaaccacc
actgattgtttttagttatagacaggtaaggggctgtgggtccttcaact
ggtctaagaaaatccaagaagatttggttaacagaatcagctttatatta
ccatattttaatctaattgcacaaattaacatatcaatagcttgtagatg
acttccagtaggaaatgagatgaagcaaagatgttgaacacaactttatt
ttccacaatatttcacaagagcattaaaaaaaaaatctttactacattgc
gcaggtaagtgctggggccagcactcagtctgtgatctttgacaggggct
ggtcagctcacctgtactctctcacagagcatttctatgtgctgtaatag
gtgtgggcccacactctgaatgtgacagctggttggggaatgtctcagct
ctcaagtgcatggtcaagcagatgagccagatcaactcacatatccaggc
cacatcaggacttagagat

gaattctctacatttatcatttctttttcttccaaggtgttgtactattc
tgagcaccttgtatttacttcaagctttaaaatcatgtcaatctctaaag
caatcaagtaggatatatatttgttttaacttctagaaggccatgattat
tgtctttaatttattcttcattttagtagttttaatcctctccttttaaa
ataatttttaaaaatttgttcatcaattcaaagagctaaatattttcttt
gcttaattttactaatttttattttgtatttcatttgttccctctgtaat
cattgctatattcccacttctattactttggattacgtttatttatgtcg
gagggtttatagttacgtggcttatttactgtgaattacttatttacaga
caccaacataataattattatttacatactaataccactcttattgaaca
cctattggattagaaatttacatacattattactaaattcctgagaagct
ctaatgataaacatacttatcttcattttatatatgagaaaatcaagatt
ttgaattagtcaaggtgccatagaatatatatgaatttcatgcagttctt
tgtgatcaaaattggagctgcatctattcctgcagagaagggtcaagtaa
agactatgaaattgtgagtcacatatttgactaaatgaaacaaacaaaca
aaaaagggggggggggagagagcgagagcgagagagagagagagagagag
agagagagagagagagagagagagactatctaaactatctaaacctcagc
ttcctcatttcaggatagccagttctaactcctagggttggtttctgtca
ctattttgggagcatttttctgaacattcttcttaagggaaaacttttcc
tcatcacctttagtcctccagactccatcaaatctaatcacttagccatg
tttgttaatctgctaccatatacttgcttattatagacagttttatgtct
tgcttgtatttatttttattctattaaataaaattgaagatcaggagaac
cagaagaatctaagtgtcctggttcatatattttggactttgtgagccag
gttataaaaacatgttcatatatctattcctttatatcaatttcgatgga
agaatgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_68815038_68816229
seq2: B6Ng01-296P19.b_49_1217 (reverse)

seq1  AACTCTAAGTCCTGGATGTGGGCCTGGATAAAGTTGAGTTGATCTGTGCC  50
      | ||||||||||| ||||| |||||||||  |  |||||||||||| || 
seq2  ATCTCTAAGTCCT-GATGT-GGCCTGGAT--ATGTGAGTTGATCTG-GC-  44

seq1  TCCATCTCTCCTGAACCCATGCCACTTGAGAGCTGGAGACCATCCCCCAA  100
        |||||  | |||  ||||| |||||||||||| |||| ||| ||||||
seq2  -TCATCT-GCTTGA--CCATG-CACTTGAGAGCT-GAGA-CATTCCCCAA  87

seq1  CAAGCTGTCACACTCAAGAGTGTGGGCCCACACCTTATTTGGGCAGCACA  150
      | |||||||||| || |||||||||||||||||| ||||    |||||||
seq2  CCAGCTGTCACATTC-AGAGTGTGGGCCCACACC-TATT---ACAGCACA  132

seq1  TTAGAAATGCTCTGTTGGAGAGAGTACAGTTGAGCTGACCAGCCCCTTGT  200
       ||||||||||||||  |||||||||||| |||||||||||||||| |||
seq2  -TAGAAATGCTCTGT--GAGAGAGTACAGGTGAGCTGACCAGCCCC-TGT  178

seq1  CAAAGATCACAGACTGGAGTGCTGG-CCCAGCACCTTACCTGCGCAATGT  249
      ||||||||||||||| ||||||||| ||||||| ||||||||||||||||
seq2  CAAAGATCACAGACT-GAGTGCTGGCCCCAGCA-CTTACCTGCGCAATGT  226

seq1  AGTAAAGATTTTTTTTTTAATGCTCTTGTGAAATATTGTGGAAAATAAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGATTTTTTTTTTAATGCTCTTGTGAAATATTGTGGAAAATAAAG  276

seq1  TTGTGTTCAACATCTTTGCTTCATCTCATTTCCTACTGGAAGTCATCTAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTCAACATCTTTGCTTCATCTCATTTCCTACTGGAAGTCATCTAC  326

seq1  AAGCTATTGATATGTTAATTTGTGCAATTAGATTAAAATATGGTAATATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATTGATATGTTAATTTGTGCAATTAGATTAAAATATGGTAATATA  376

seq1  AAGCTGATTCTGTTAACCAAATCTTCTTGGATTTTCTTAGACCAGTTGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGATTCTGTTAACCAAATCTTCTTGGATTTTCTTAGACCAGTTGAA  426

seq1  GGACCCACAGCCCCTTACCTGTCTATAACTAAAAACAATCAGTGGTGGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCACAGCCCCTTACCTGTCTATAACTAAAAACAATCAGTGGTGGTT  476

seq1  AGGGACAGAGAGTGGCATAGAACAAAATATGGTCTGATAAATTGATTTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAGAGAGTGGCATAGAACAAAATATGGTCTGATAAATTGATTTCC  526

seq1  TTGACATTTATTGGGCAACTGCTCTAATCCAAGGAGGTATTACAAGTTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATTTATTGGGCAACTGCTCTAATCCAAGGAGGTATTACAAGTTTT  576

seq1  TTTTTTTTTTTTAATCTTTGCTTGCTTCTACAGTGAGTCAAATAAGTAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTAATCTTTGCTTGCTTCTACAGTGAGTCAAATAAGTAAC  626

seq1  ATTGGAAAAGAAAGGAGATTCAACCACTTGTGTGATTTCATTGTGTTTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAAAGAAAGGAGATTCAACCACTTGTGTGATTTCATTGTGTTTGT  676

seq1  TTTTATTGTGTCTGTATTATTAGATTGGATTGTATTTACTTTCAGCTTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGTGTCTGTATTATTAGATTGGATTGTATTTACTTTCAGCTTTG  726

seq1  GGAGCATTTTTTTTTCTGATAATGTGCTCTCCTTAACCATGTTCCCTCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATTTTTTTTTCTGATAATGTGCTCTCCTTAACCATGTTCCCTCTT  776

seq1  TTGGGATCGCTTTCCACCAAAGGCCCAGTACTCAACCATCTCAAATTAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATCGCTTTCCACCAAAGGCCCAGTACTCAACCATCTCAAATTAGC  826

seq1  CACTGCATCATTGCGATCATGTTTATAGAAAATTCTGGACTGTCATTACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCATCATTGCGATCATGTTTATAGAAAATTCTGGACTGTCATTACA  876

seq1  ATATACTGAAGAGGACCAAGTGTACCAAACAGTGTCTTCATGCTAAAGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTGAAGAGGACCAAGTGTACCAAACAGTGTCTTCATGCTAAAGAC  926

seq1  TATGGAGCTCTGTAATTGGATTCTAGGGAATCTTCTCATCACTTAGCTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGCTCTGTAATTGGATTCTAGGGAATCTTCTCATCACTTAGCTTT  976

seq1  TGGGATTTCAAATTTGGATATTTTCTAAAGTACAAAACTGTAGATGTTCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTTCAAATTTGGATATTTTCTAAAGTACAAAACTGTAGATGTTCT  1026

seq1  TGTATGATAACTATGAGTCCACAAATCAAGGAATATAACAAAATACCATG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGATAACTATGAGTCCACAAATCAAGGAATATAACAAAATACCATG  1076

seq1  TGATAGTCCACATCTACTATAGCTTATAAAATAAATATGCCAACCAAACA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTCCACATCTACTATAGCTTATAAAATAAATATGCCAACCAAACA  1126

seq1  GGACTAAAATCATTCCTGATAATGAACACGTGTAACTGAATTC  1192
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAAAATCATTCCTGATAATGAACACGTGTAACTGAATTC  1169


seq1: chr4_68701503_68702650
seq2: B6Ng01-296P19.g_69_1226

seq1  GAATTCTCTACATTTATCATTTCTTTTTCTTCCAAGGTGTTGTACTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACATTTATCATTTCTTTTTCTTCCAAGGTGTTGTACTATTC  50

seq1  TGAGCACCTTGTATTTACTTCAAGCTTTAAAATCATGTCAATCTCTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACCTTGTATTTACTTCAAGCTTTAAAATCATGTCAATCTCTAAAG  100

seq1  CAATCAAGTAGGATATATATTTGTTTTAACTTCTAGAAGGCCATGATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAGTAGGATATATATTTGTTTTAACTTCTAGAAGGCCATGATTAT  150

seq1  TGTCTTTAATTTATTCTTCATTTTAGTAGTTTTAATCCTCTCCTTTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTAATTTATTCTTCATTTTAGTAGTTTTAATCCTCTCCTTTTAAA  200

seq1  ATAATTTTTAAAAATTTGTTCATCAATTCAAAGAGCTAAATATTTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTTAAAAATTTGTTCATCAATTCAAAGAGCTAAATATTTTCTTT  250

seq1  GCTTAATTTTACTAATTTTTATTTTGTATTTCATTTGTTCCCTCTGTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATTTTACTAATTTTTATTTTGTATTTCATTTGTTCCCTCTGTAAT  300

seq1  CATTGCTATATTCCCACTTCTATTACTTTGGATTACGTTTATTTATGTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTATATTCCCACTTCTATTACTTTGGATTACGTTTATTTATGTCG  350

seq1  GAGGGTTTATAGTTACGTGGCTTATTTACTGTGAATTACTTATTTACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTTATAGTTACGTGGCTTATTTACTGTGAATTACTTATTTACAGA  400

seq1  CACCAACATAATAATTATTATTTACATACTAATACCACTCTTATTGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACATAATAATTATTATTTACATACTAATACCACTCTTATTGAACA  450

seq1  CCTATTGGATTAGAAATTTACATACATTATTACTAAATTCCTGAGAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTGGATTAGAAATTTACATACATTATTACTAAATTCCTGAGAAGCT  500

seq1  CTAATGATAAACATACTTATCTTCATTTTATATATGAGAAAATCAAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGATAAACATACTTATCTTCATTTTATATATGAGAAAATCAAGATT  550

seq1  TTGAATTAGTCAAGGTGCCATAGAATATATATGAATTTCATGCAGTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTAGTCAAGGTGCCATAGAATATATATGAATTTCATGCAGTTCTT  600

seq1  TGTGATCAAAATTGGAGCTGCATCTATTCCTGCAGAGAAGGGTCAAGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCAAAATTGGAGCTGCATCTATTCCTGCAGAGAAGGGTCAAGTAA  650

seq1  AGACTATGAAATTGTGAGTCACATATTTGACTAAATGAAACAAACAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATGAAATTGTGAGTCACATATTTGACTAAATGAAACAAACAAACA  700

seq1  AAAAAGGGGGGGGGGGAGAGAGCGAGAGCGAGAGAGAGAGAGAGAGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGGGGGGGGGGAGAGAGCGAGAGCGAGAGAGAGAGAGAGAGAGAG  750

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAACTATCTAAACTATCTAAACCTCAG  800
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAG-ACTATCTAAACTATCTAAACCTCAG  799

seq1  CTTCCTCATTTCAGGATAGCCAGTTCTAACTCCTAGGGTTGGTTTCTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCATTTCAGGATAGCCAGTTCTAACTCCTAGGGTTGGTTTCTGTC  849

seq1  ACTATTTTGGGAGCA-TTTTCTGAACATTCTTCTTAAGGGAAAAC-TTTC  898
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  ACTATTTTGGGAGCATTTTTCTGAACATTCTTCTTAAGGGAAAACTTTTC  899

seq1  CTCATCACC-TTAGTCCT-CAGACTCCATCAAATCTAATCACTTAG-CAT  945
      ||||||||| |||||||| ||||||||||||||||||||||||||| |||
seq2  CTCATCACCTTTAGTCCTCCAGACTCCATCAAATCTAATCACTTAGCCAT  949

seq1  GTTTGTTAATCTGCTACCATATACTTGCTTATTTATAGACAGGTTTTATG  995
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  GTTTGTTAATCTGCTACCATATACTTGCTTA-TTATAGACA-GTTTTATG  997

seq1  TCTTGCTTGTA-TTATTTTTATTCTATTAAATAAAATTTAAGATCAAGGA  1044
      ||||||||||| |||||||||||||||||||||||||| |||||| ||||
seq2  TCTTGCTTGTATTTATTTTTATTCTATTAAATAAAATTGAAGATC-AGGA  1046

seq1  G-ACCAGAAG-ATCTAAGTGT-CTTGTTCATATATTTTTGAC-TTGTGAG  1090
      | |||||||| |||||||||| || ||||||||||||| ||| |||||||
seq2  GAACCAGAAGAATCTAAGTGTCCTGGTTCATATATTTTGGACTTTGTGAG  1096

seq1  CCAGGTTTATAAAACATGTTCA-ATAACTATTCCTT--AATTAAATTAGA  1137
      |||||||   |||||||||||| ||| |||||||||   || || || ||
seq2  CCAGGTTATAAAAACATGTTCATATATCTATTCCTTTATATCAATTTCGA  1146

seq1  TGGAAG-ATGAG  1148
      |||||| |||||
seq2  TGGAAGAATGAG  1158


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